| Id Trinity | FTRINITY_DN49749_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_199008 |
| Sequence | CTAAACCTAAACTAGACCTATTTTTTTGCCACTATATTTTTCTTCACCTTTTCTCTTTCTTGAACCATAAACCCTTAATATTAATATAAACCTCTTCATA TCTCTCATTCCTTTCAAAGTAACGAATTCGAAAAACCCTATGGAAGAAGAACACACCGAATCCTTCAACGATGCCTCAGATCTCTGCCACCAACTCATGG ACCGTTACTCCAACTCCTCCGCTCCACAGCACCGCCACCTCCTCGCCACCGCCGCCGCACTCCGCTCCAACCTCTCCTCCGAATCCCTCCCTCTCACTCC CTCCGCCTACTTCGCCGCCGCCATCTCCGCCATCGACTCTGAGACGCTCGACGCCACGGCTCTCTCAGCGCTCGTCTCGTTCATGGCCATCGACCTCCCG CTCGTGAAACCGGGCGATATCGCGGCCGCGAAGTCGCGGAAGGCGGTGGAGGTAGTGGTGAGGGTGATGGCTAGGGAGGGGGAAGGGATGGGAGTGTCGA GTGTGAGAGCTGCGGTTAAGTGCTTAGGGGTTTTGATTGGGTTTAGTGACTTAGAGGATTGGGATTCTGTTGAATTAGGTTTCGGAACGTTGCTGCAGTT TTCTATTGATAAGCGCCCTAAGGTGCGAAGATGTGCTCAAGAGTCTCTTGAGAAGGTTTTCCGGTCTCTTCAATCCCCCAATGTTATTAAGGAAGCTAGC AAGTTGGTATTGTCAGTGCTGAAAAGTTGCATTGCTTTGGCAAAGAAATTAATTTCTTCGAAGACTGTTGATGACCTTAAAGATGATATGATTTCAAAAA ATGAAAACTTGGAGGTCTTGCATGTACTAAACGTAGTTAATCTTGCTGCCCCTCACCTTTCTACAAAAATAATTCCGAAGGTTCTTTCGGAAGTGCATAA ATTATTCAATTCTCAGAACACGGCACTGTCACGACACATTCTTAAAACAATTGAAGCAATTTTGGTTGCTTCGACTGTTCGAAATATAGTCTTGGAGATA AACGACATTGTAGTTTCTCTTGCTTTGTTTGTATCTTTGGGAGATAAGAACCCTTTGGATACTGTGATTCTTGCAGCAACCTTATTAAGACTTGCAATGG ACTTGCTTTATACTGGAAAATCAAGTTTGTGGATCAAGAATCTTCCTCTAGTTTGTAAATCTGTAATAGGTCTTCTAACTTTTGAGGGAAACACTGCATC ACAGGCTTCAAGTATTTTGAATGATTTGCTCAAGCATCATGTTGGTCCCCAAATTTTATCCATTGGTATAGACCAAACATCTCATGAAAATAGTGAGATA AGCATAGAATGCAATGCAATAAAGTCGACATGTGCGGTTTTCGAGAATGCCCTTTCTGTTGCTGATGGAATTCCAAATGAGCATGTTTTCTCAGTCATCT CTGTTTTACTTATTGAGCTTGGAGAATTGTCATTTGCGTTTATGAGGAACGTCGTGCTTAAACTTGCAGACTTGATGAATCAAACTTATGGAGGCAATGG TAATAATGAGCATCTTCGGAAATGCATTGGTTCCGCTGTTTTTGCTATGGGAGCAGAGAGATTTCTTACACTTGTACCTATCTCTTTTAACGAACACGAC TGTACTTATTCAAATATTTGGCTAGTACACATCTTGAAGCGCTATGTTACTGGATCATCGCTTGCTTACTACATGGATTACATTGTGCCTCTTGCAAAAT CCTTTAAGAAGGCTAGTCGTAAAGTTAAAAAGTCAGGGATTAGTCAAGATCTGTTGGCAAGAGCCCATGAACTGCGAGGATTGCTACCTAGCTTTTGTCA TCATGCAAATGACACGTACCAAATTTTTTCTTCTCTCTCCATTGTCCTTATTAATTTTCTTAGAAAGGATCCTTCGATGCATGAAGATGTTTATGCCGCA TTACAGATTCTTGTGAATGAGAACAAAGCAGCACTTACCCCTACAAAGAGCGAATCAAATATTTGTGCTGTGGATGATTCTTCATTTGACTTCAGCACAC AACCTTCTTATTCAAAGGAAGCTGCTACCAGAAACATAAAATCTATGGCATCATGTTCGAATCAATTGTTTCATGTCTTATTAGATATATTTATCACTTC ACTTCCTGAGAACCGCTTTTCTTTGAAGAAAGCCATTGGATGCCTGGCTTCTATTACTGATTCATTGGTGACCAAAAAGGTTTTTCTATATCTGCTTAAG AGGCTTCAGTTTGTAGACTCTGAAGGAGATGCTGAAATGCCGACGAGTGACAGTAGAGTGGTAGATGCTGATCCAAGTGACATGGATAGAGATACTCAGA GGTGTCTAGTATTGGAAATAGCATCTTGTCTTGTTGAAGGGGCCAAGGATAATCTTATTGAGATAATATATAATTTAACTATACATTCATTTAAGGCCAC TAATGAAAGAGTTCATCATGAAGCATACCATACTTTGAGCAAAATTTTAGAGGAGCAACCATGTTTTTCTTATACAAGATACGCGGAGCTAATTGATTTA TTGCTTAGTCTAAAACCTCCAGTTGATATTTCGTTTCTTAGAAGCCGGTATACTTGTTTCCACACTCTCGTGGTCCGCACAGTTGAGAGTAGTCTAGAAG AGGAGGGGGATTCAAAGGCTTTTCTTATTCTCAATGAAATTATTCTAACATTAAAAGATGGAAATGAGGAGGCTAGGAAAGAGGCTTATGATTTACTCTT AAATGTAAGTTCTAGCTTGAGAGACTCATCAGGTGGTCCTACTGAACCATATCACAAACTAGTTAGCATGATAATGGGATATCTTTCTGGGTCATCCCCC CATATAAAAAGTGGAGCAGTGTCTGCACTGTCGGTGTTGGTATACAAGGATAGCAATCTTTGTCTCTCTGTTTCTGATCTTGTCCCATCCCTTTTGTCTT TGCTCCAAACCAAAGATGTGGAAATCATAAAAGCTGTCTTGGGCTTTGTAAAAGTGATGGTGTCTAGCTTGCAAGCGAAAGAGTTGCATAATTTTCTCTC TGACGTAGTTGCTGCAATCCTCCCCTCGGCAATGGGTTCAAGACACCATTTTAGATCAAAGGTCACTATCATATTTGAAATTTTAATGCGGAAGTGTGGT TCAGCTGCCATCAAACTTGTTGTCCCTGAGAAGTATAATGGTTTTCTGAAGACTGTTTTAGAGGGTTATCTCTTGTTGTAAGATTAGTTTGTCTAAAAGC GGTCTGGCGGAGGTTGCAAATTCTTTAGCGACCTTATGACTTATCTTGGCATCCCTTTAGGAGGTAATCTGCATTTGTTATTCTTTTTGGGTTCCATGGA GGGACTTCCCACATCGGGAATGCCAAACTTTGACTCATCTCCATTTGAGATAGGGATGGAGCATCTGGGTCTGGATTGAGTTAAAGGCAATAGTGTTTGC AGTAAATAGTGGCGGCACTATTTGCCTGATCACGTTTTTATAATCAGGAGGGTATTGGTAGACCCACAGTTAATGTGTGCATAATACAAGGAGTAACAAG GGGCATTAACTCTTTGTAAGTGCAGAAAGCGAAAATGTCAACAATTATAATGGGTAGTAATTACAGTGAGTGGGGGTAAAAAGAGTAAATGGTCAAATGA ATATGCAGTGATGGGAAATAAATAGTGAGTGAGAGGGGCTGATGGAGGGGTCATTCTGGAACTTTCAAAAAATTGTGATGGTTGAGGCCATTGGTGGTTA TAAGCAAACACTTGGCTTTTCAGGTTTCTTCTTTAGTGTTCAACTATTACTTTTGTTTCTGTAGTTTTTGTTTCCTATCATTGCACTTGGTGCCTTCGTT TTCTGACTGTTCTCTAATTTCAACTAATAATATCTGTTCCTAACTTTCTATCACTTTGTATCATTTTACTTACGGAAAACTCCGGATTCAATTCGAATGC ATGTATTGTCATTTTTATTAAATGCATTTGGCTTTCACATTAACTACCTCAAAAGTAGCAATATATGATATGATTGGTTGATAATGTAAACAGTTTTACA CTTGCATAAAAGTTAAACTGGAATTCTTTTCTGTTTGGATTTCTTGCTACTTTTAAGTAAATTCATTTGAAATTTTGTAATATTTAGAGATAGTGAACTG CTGACTGATTTAATATGTTTGGCAAAACTTTCTATCATGCTATCTATCGCCTTGCAGAACCGACGTGGCAAATCAAGTAAAGCAGTCTCTGACGATACAG AAGATATGCACGACAATTCATTTGCCAAGGGGCCAGAGTGGAGGAAGTTCAAAAGTTCTGATTCCCAAGAGAAGGATATGGGTAAACATAGAAAGAGAGA TGGGGAGAAGAATTTTGGGTCAGGCTGGACCAGCAATGAGGAATCAAGATTTGGCAAGAGAAGTAGATATTCCAATGATAAAAATTCAAATGCAGGAAAA TCAGAAGGAAATAGCAATAAGGGCAATAAAAGAGAGTACAAAAGTTTCAGTGAAGGAGGTGATAGAAAACCAAAGTCAACAAACACATGGAAGGATAAAT CAGCTTCTCATGTACCCATAAGAGGTAACAAATTTTCTAATTCAAAAGGGAAATTCAAAAGAAATTGATAGATAGATGAACTGCAATTTAGTCAAAAGCT GGTAAAACACTACTAAGAAGCATGGCATATCTCATTGATGTGTATGAATGAAGTTTTTGGTGTTTTGCCTGATTTTTCATACTATGTTTTTCATTATCAG TATTTGTAATGAAATAGATTCAGCATTTTTGTGATGAGAAATAGCTGTAAACAAACTTGTATTCATTTACTAATTATAATTAATTATTGTTTTTCTTATC TTAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_19013; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_199008
| Blastp | RRP12-like protein from Gallus with 21.13% of identity |
|---|---|
| Blastx | RRP12-like protein from Homo with 21.64% of identity |
| Eggnog | ribosomal RNA processing 12 homolog (S. cerevisiae)(ENOG410XQ3D) |
| Kegg | Link to kegg annotations (423845) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453105.1) |
| Pfam | NUC173 domain (PF08161.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |