| Id Trinity | FTRINITY_DN49817_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_81775 |
| Sequence | GCCTAAAGAAGTAAGAGTTGAATCAATTTACTCTTCATCTTAACTATCAATTTATCGGAAATTGAATGCGTATGATTTATGAGTTGATAAGGAAAATGGG CTGAGTGAAGTGGACTATAGAGTCCAAAACAGATAGAAAGTCGAAACCCTAATAAGGGTTTTGATTATGAAAACGAAGAGAAGGAAAGAAAGGAAGTAAC AGAGAATGGAAGAAACAGAAGCAGAAGTGGCACCCGCACTCATAGCGGTTCATCCTCACCGTTCCTCCGTCGCCGTCGCCGTTGGATACGACCTCCGCGT CTTCGACCTTCTCGCTGGTGTTGGAGTTACTTTAGTGAATGACTCTTCTTCATCTTCATCTTCATCTTCATCATTTCATAAGGATTCAATCAGAGCCATT CGTTTCAGTGCAAATGGAAATCTCTTTGTTTCTGCCGGTGATGATAAGACTCTCAAAATTTGGTCATCAATCTCTTGGCGCTGCATCTTTACTCTGTCCT CTGAAAAGAGAATCAGTGCAGTTGCCATAAGCAACGATGAATCTTGTGTCTGTTTTGCTGACAAATTTGGGGTTGTTTGGGTTGTGGATATCACCGGCTT TGATGCCAATCAACCATTACTTGATAAGAAACCTACACCCCTTCTTTCTCACTACTGCAGTATCATCACTAGCTTGGAATTTTCCCCAGACGACCGGTTT ATTTTGAGTGCTGATCGAGATTTTAAAATTCGAGTGAGCTAACATTTCTACCAACTGAATAAGCATTTTGGTTCAGTATGTTATCTTTATTTTTATAACT ACGTCACTATAACCTTATAACAATTCACAGGTTACTAATTTTCCTAAGAAGCCATTAGATGGAGCTCATGAGATACAAAGTTTCTGTCTTGGTCATACAG AGTTTGTCTCTTCCCTTGCTTTTTTTCAAGCTCAGGAATACCAGCATCACCTTCTTTCTGGCAGTGGTGATTCAACAGTTCGTTTATGGGATGTCTCATC TGGAGCACTCCTAGATACTTGTGACGTTGCTAATAAGGCAGGACTTTTAGAGTCTAATGGTAATGGTAAATCAGAGGAGCATGGGCATGCTGTAACTGAT TTATGCACCACCCTGGATGGTTTGCTTGTTGCAGTGGCTATTCAAGGCTTGCAAGGAATAGCATTGTTGAGCTGCAATGTTTCTGCACAGACACTTACCC TTGCCAAGGTGAGCGCTTTGGTAACACATGCTTCAAATGACCATTGACTTGCATCATTACTGCCATATTAAGTTATCTCTTGGAATCTACTTTTCAAGTC TGAATTTATATTTTTGATTCAATTTATGTACTATTACTTTTGATTTGGTCCTCACCGTTTATTGTTGTTTGAATTAAAGTGCAGTGCCAAATTGAAAAAG AGCGCATGTGACAATCATTTTTAATTTGGTCCCTATACCTCAATTCCAAATAAAAGTGTTAATACTGTTATAATAACAATAACGACAAGGACCAAATTGA AGATGATTGTCTATATAAGGACTGGGTTGACAATATTTATGCAAAGGGTTTGTGTTAAAATGTGCCTCACATATAGGAGGAGCTTTACCCGAAGTACAGT TTAGCCTATTTTTAGAGGCAGGCAGGCATTTAAACTGATTGGAATGTTGCAGGTAGTTTCTATTGAAGGAGAGGCCTTTGTCCCTACCTGCTTGGGGTAT GCTGCCTCTGCTAGGGAATTGTGGATAGTTACAGGTGTCTCTAGTTTACCTGGTTGTAGTCACCCTTCTTTTGCTCGGGTCCGAGTAATTTCCGGTATAG ATATTGAGCAAGAGGCAGTTGTTCTCGGAGATGACAAGATGCCCGGGGGAGAAAAGCTGCTAGAAACATTGCAGGGAACCGCATCAGTAGATGAGAATGC ATTTTTGGCAGCAGCTGAAGCTGTCAAAACAGCAATGTGCAACCTATTAATAAAAAAGCAATACACTTCAGAGAGTAGAGAATCTAGGAAGAAAACCAGG AATGATAGAAAACTGAAGCAGTAACAAGTTTGTTTTCTATTTTTTGTCTTAACATATATGGAGATGCTATGCTTGGTTTTCATTAATACAAAATTAGTGT TTCTTAGTTATTTATTTCTCTTTTACACATGACCACATAGATGCTGTAACAAAATTCATGTTGGGCATAGTATTTGCAAGTTTTTTTGAAGGTTTTGAAT TTTAATTTTTGAATGAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_19110; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_81775
| Blastp | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 from Bos with 33.61% of identity |
|---|---|
| Blastx | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 from Mus with 36.13% of identity |
| Eggnog | Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational change of the catalytic subunit(ENOG4111WRP) |
| Kegg | Link to kegg annotations (508051) |
| CantataDB | Link to cantataDB annotations (CNT0000374) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454426.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |