| Id Trinity | FTRINITY_DN49833_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_82116 |
| Sequence | TGTGAATATTCAAAAAGAGTTACACAGACGAAGAAAAAGGATACGGTGTTGAGAAGACAGAGTGCAAACTTTGTTCCTTCTTTCTATGGATCAAACCATA TCTCGCATAGTGGCGGAGCTCGACGACCTCCGCCACAACAACCACCACCAACCACCATCTCCTCTCTCCAACGAATCCCTCTCTTCTCTGCAACTCCTCC TCTCCGACGAAGAAGAACAAGAACCCTTAACCCGCCTCTTCGATGAGCTCTCCTCCAAATCCCTCTCTCCCTCCGCCCTCATCTCACCGATCTCCTCCGC CATGGATTCCGGTTCCCTCACCGCTTCCGACGTCTTCCTCTCGTTACTGCTTTCTCAAAACGCACCCGTTTTCACTCTCTTTACTCCAATCTCGTTTCTC TCTTTCCTTCGCTCCCTTCGTCGCTCTTTCAAAAACCCTCCACCCGGTAACTCGGCTCAACCGAGTCAGGACGGTTCGGTTTCGAGGAAGAACCCGAAGA GAAGGCGCACTGGGAAGGGTAAGGCTTCGAGGAAGAGTAATGGGTCGCGAAACGACGACGTTGAAGGGGTTTATGTTGATTTTAGGGTTTTGATTCTCGT GTTGGAGAAGCTTGTGATTGTGATGGGTTTGATTCATTTGGATAGGTTTCCTGAGAGTCTCAAGTCTTTGGTTCAGACAATGTGTGAAATTCCGGTGGCG GCGCTTGATTTGTGTGGGAATTCAGGGGAGTATGGTAAATTGGTGAATTTGTGTTCTAGGGTTTTGTGTGAAGTTTTGAAACCTGAGCATGGTGAGCCTT TGAGTACTGCTCCTGAGGTGTTGAAGTCTTTGACTTTATTGATTCTTATGCCGAAATCGCAAGCTAGGACTTTTGCTCTTGAGTTTGTTGTGAGGGAGAT GAGGAACATGGCTAGAGAGTGTGATGGGGTGAAGAAGGCATTGGTTAATTTTCCTAGGTATTTGGCGAACAAGGCACCAGAGAAGTCAGAGCCTAGAGCA TTGGCAGTGGAATCAGTTATGGAAATTGTTCGTGTTATGGGGTTTGAGGATCAAATTGAATTTGTTAAATATGTTGTGCAAATGTCTAGAGGGAAATCAA ATCTTAGGCTCTTGGCCATTGATCTTATTTTGAACCTTGTAATGTTGTTGAAGGATCCATTGGGTGTGAATTCGGAAGATGAAATGAATGAGCCTTGGGG GATATGGTGCTTGGAGGCGTTGGTGAAGCGTTGTAATGATGTGAGTGCTGTGATTCGAGCTCGGGCTTTGTCAACCTTAGCTCAACTAGTGGGATTTCTC TCAAGTAATGCTGATTGTAATGTGATTTTGAAACAGTTTATGGGCTTTGGTAAGGTCAGTGATAATAATGCTGAAGGTGGAATAAATGATATGCTGAGGA GAAGGTGTATGGATGATAAGGCAGTTGTAAGAAAGGCTGCTCTTCTTCTAGTTACTAATTTGACCGCCCTTCTCGAAGGTGTGATTGATGAAGTGGTGCT CAAGACAATGGGCATGGCTTGCTCGGATCCACTTATTAGCATGAGAAAAGCAGCAAGTGCAGCCCTTTCGGAGGCTTTTAGAAAATTCTCTGCTGAAACA GTAATGACTGAGTGGCTACATTCAGTTCCACGTCTTATAGCTGACAATGAAACTAGCATCCAAGAAGAATGTGAGAACATGTTTCAGGAGCTTGTTTTGG ACTGGATATCTAGAGCTGCATCTGCTATCCCTCCACACAGTGAATCCATTTCTAAGAGAAAAATGAAAGAAAAAAGTTTAGACGCAGAGATGGAGAAGCT TTTCCCCAAAGGAGTCTTGTATCTTCTGAGAGAGATTTGCAATGGAGAGGTGAGCCCTTGGGTGAAGAAAATTTGCTCAAACCTGGGAAAAAAGAAACGG CTGAATCGCAAAATTGTTATTGCACTTCAGAATATAATTAGAGTCTCAGAATCTATTTGGCTGAGTCATTCCATGCCAATTGAAAAATGGACAGCCCCAC CTGGTGCTTGGTTTCTTTTATCAGAGGTGTCAGCATTCCTTTCAAAAGCAGTCGACTGGGAATTTCTCCATCATCATTGGCAGCTTCTTGACAAACATGA AGTAGAAGGTGAGTTTAAAAGCCCATTTGTACAAAGAAATGCGTTTGAAGAGGAAGAAAGCATAGAATGCAATTCCGTTGCCTGGGCTAGTGACCGAGTT TTCCTCTTACAGACAATCTCTAATGTTTCTGTGGAGCTGCCTCCTGAACCTGCAGCTGATTTGGCTCATAACTTGCTCAAACGGGTTGAAGAATTCAATA TGCATACAACAGAGGTTGATGCTCATGTAAAAGCGCTTAGAACACTGTGCAAGAGGAAAGCTTCAAATCTCATGGAGGCAGAAGCATTAGTCTTGAAATG GGTACACCAAGTTCTCTCCAGAGCTACTAGAATAATTGAGAAGTTCATTTCACAGAATTCAGTGCAAAATCCAGAAAGTACCTTTTTTACTCCACCTAGA ACTGGGGGTAGAAAAAGCAGGAAATCAGTAGCAATGTCCAAGTCGTTGTCAAAAGCAACTACAGCAATTTATACCATTGGGTCTTTAGTTATTGTCTGCC CATCTGCTGATATAAGCATTGTAGTTCCATTACTGCATACTATAATCACTTCAGGGAGCTCTGGTCCCAAATTAGATAAGTTACCTGGCCCTACGACCTC TCTACAACAAAATGCTCCTTCTTTTTATATTCAAGGGTGGGTTGCCATGGGCAAGCTTTGCCTTGCTGATGGGAAGCTTGCAAAGAATTATATTCCTCTG TTTGTACAGGAGCTTGAAAAGAGTGATTCTGCAGCTCTTCGAAACAACATTGTGGTGATGATGGCAGATTTTTGTGTTCGGTACACTGCTCTTGTTGATT GTTACATAACAAAGATCACAAGGTGCCTCTTGGATCCTTGCGAACTTGTAAGAAGGCAAACATTCATATTGCTCTCCAGATTGTTGCAGAGGGATTATGT GAAGTGGAGAGGAGTGCTATTTCTTCGGTTCCTTTTGTCACTAGTGGATAGGTCCGAGAAAATTAAGCAGTTAGCAGATTTTCTCTTCGGAAATATTTTG AAAGGTTTGAAGCCTTACCTTGACAGGTCTACTTGCAGTTATATAAAATGAATAATATGTTTGTTAATGGACTTTGACTATTGTTCTTTTCCCACCAGTC AAGGCTCCACTTTTAGCATATAATAGTTTTGTAGAGGCTGTTTTTGTTCTGAATGACTGCCATGCCCATAATGGACATCGCGAGTCCCTTAGCTCACGAA AGGAGAGCCAACTTTTTTCCATCAGGTGGGTCCAAAATTAGCAATTGTCAAGACAGTTATTTAGTTGATAATTGTGCTTATATCAAATCTGCATTGTTCT CTTCAGCGGTGTGGATGAAGAGTCAAGATCTAAAAGAATGCACATTTATGTTTCTTTACTAAAACAAATGGCTCCTGAGCATCTTCTAGCAACTTTTGCC AAGATATGTGCAGAAATTCTGACTGCAGCTTCTGATGGTATGCTGAATATAGATGATTCAACAGGGCTGTCTGTTCTACAGGACGCTTTTCAAATTCTTA GCTGCAAAGAGATTCGCATTCCATCCACACGTGCACCATCTGAGTCAGCAGAGATAGAAGATGAAGGGGGAGAAAATGGAGCTGCAGCAAGAGGAAAGGC TATAACTCAGGCAGTGAAGAAGGGCCTTATCCAAAACACAATCCCCATATTCATAGAGTTGAAACGTCTATTGGAAACCAAGAACAGTCCCCTGATAGGG TCTCTCATGGAGTGCCTCCGGGTTCTTCTAAAGGACTATAAGAATGAGATTGATGACATATTGGTTGCTGATAAGCAGCTGCAGAAGGAGCTTATCTATG ACATGCATAAATATGAGGCAGCAAAAGCTAAAGCAACAATTGCCGAGGCTGTGGCCACAAAGCCAAAACCAGGTGCATTTCAATCACCTGATGCTTCTAG AAACCTGACAAAGACACAAGGTCAAAGCCGATACGTAAACAAGTTTCCAAATGGTTCAAAAGTTGCATCAGCAATGGCAGATGCAGCAGCAGCAGCAACA GCTCGTTCCGTGCTCCGGGAAATCAACAAGGGCACAGGGACACCACCACTTAGTTCTCTGAGTGTTCCTAAAGTCAGGTCTGGCACTAGTGTACGCAATT CTAGAGATGATAAGCGCATGGATGTCATAGAAGCTGTGAAGAAAAGACAGTCTTTTGATTCTGATGAAGAAAACTAACATTACATTGCATTTCTCTATTT GTAATTTATAATAATTTCAGGTTTCCTTTCTCTAAGTGCCATTGGAGCCTGAATGAGGGGTCTTTCATGACATGTATAGGGGCTTGTTGCTCCATTCCCA TCTTTTAAGGGCCACTGTATGATTAAACCCTTGGTCTTGTTGAGAGGTTATTCTTTGGACATAAATTTCTCTTAGCTAGCACTATCCTTTGCCTGACTTA ATAACTTGTGAGGGATGAATTTTATTAGTAAATAATATTATTTATTATATGAAATGTAAAAAATAAATAAGTCTGTTATAGGAATAGGAGTCAAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_19136; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_82116
| Blastp | Condensin-2 complex subunit D3 from Mus with 23.55% of identity |
|---|---|
| Blastx | Condensin-2 complex subunit D3 from Mus with 23.87% of identity |
| Eggnog | Non-SMC condensin II complex, subunit D3(ENOG410XSGK) |
| Kegg | Link to kegg annotations (78658) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419468.1) |
| Pfam | non-SMC mitotic condensation complex subunit 1 (PF12717.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |