Ll_transcript_82068

• Id Trinity: FTRINITY_DN49838_c0_g1_i1
• Name Transcript: Ll_transcript_82068
• Sequence: TCTCATACTTAAACAAATAGATTCTATCCAATTAAAGCCTGAAGGTGAGCCGTGGTGCAATGCCGAGGTTGTTGCCTTGTGATCTGGGGTCACGAGTTGC AATCATGGAAATAGTTAGCTTGTGGGATGTGTGATATTGGATGCCAAAGAAGCTGAAGACAAATATATACAATTGGTGCATTCCAAAAGTCATGTAAATC AGATTAAGCACATCAGCACAAAACAATACGATTCTCGAAGGCATAAGATTGCGTTAAAACTGAATTCTATATATTTTAATGAAGGTTCATCAAAAGCTGC TTATCTCGCTGCTGGCTCTGCTATTGAGGTTGTTGAAAAAGTGGCAAGCAGGCAATTGCATTCTGCTGTTGCTATTGTGAGGCCTCCAGGTCATCATGCT GAACATAATGAAGCCATGGGATTCTGTCTATTCAACAATGTTGCAATATCTGCTTCTTATCTCTTAGATGAAAGACCAGAATTAGGTATCAAGAAAATTT TAATTGTGGATTGGGACGTCCATCATGGAAATGGTACTCAAAAAACGTTCTGGAATGATTCCCGTGTCTTATTCTTCTCTGTTCACAGGCATGAGTTCGG AACTTTTTATCCATGTGGTGATGATGGCTCTTATACCATGGTTGGAGAAGGAGCCGGGGCTGGATATAATATAAATGTACCCTGGGAGAATGGGAGATGT GGTGATGCTGATTATTTTGCAGTGTGGGACCACATTTTGCTCCCGGTTGCCAAAGAATTTAGTCCAGACATAATTATTGTCTCTGCTGGATTTGATGCAG CTGTTGGTGACCCTCTGGGTGGATGTCGTATCACACCATTTGGTTATTCTGTTCTGTTGGAAAAGTTGATGAATTTCGCTGAAGGTAGGATAGCACTGGT TTTAGAAGGAGGATATAATCTGGACTCCATTGCAAACTCAATGCATGCTTGTGTTGAAGTTTTGCTTGAAGGCAAACCTGTTACCGAATCTTCAGAGGCT TACCCATTTGAGTCCACATGGCGTGTGATTAAAGCGGTTCGTCAGGAGTTAAGTCCCTTTTGGCCTTGTCTTGCTAGTGAATTACCAAAGGATTTAATTT GTCTAGTTGCACCACCTCCGCATAATCTTATTTCAAGCTCTGACTCTGAGACGGAGGGTGACATGGATCCCCTCAATTCTGATAACCTTGAAGAGCTTCT TCAGGATGTCATAATACCACTATCTAACCTGAAAGTTGATACAGATCAAGAGATTGGTACTTCTAATACTTGGCGATCAGAATTGTCAAATACTTACATA TGGTATGCCTCTTATGGATCAAATATGTGGAAATCAAGATTCTTGTGTTATGTAGCAGGTGGACAGGTGGAAGGTATGCAAAAGCACTCTTCTGGTGCAG TGGACAAAGCTCCACCAAAGGAAATCCTTTGGAAGACTTTCCCTTGCCGTATATTTTTTGGCCGCAATTCTTCCAAGTCATGGGGTCCTGGAGGGGTTGC ATTTTTTAATCCTGAGAGAACTTTTCAGCACAATACCTACCTATGCCTGTACAAAATTTCGCTAGAGCAGTTCAATGATGTTTTACTTCAGGAAAACGGT TTAAGCCTTAATGTGGGTTCTCCTTTATTTGATATAACTGCCCTTAATGCTATCTCAGAGAAGGAGTTCAATTCTTCAGAGGCTGTGAAGGGTTCTTGGT ATGGTGATGTTGTCTACTTAGGAAAGGAGCATGATATCCCAATTCTTACCATGACGTGTTCATTTCTCGATATCCAACGCTTTAAAACGGGGGAGCTGCC ACTGAATGCTCCTAATAAAGCTTATGCCAACACCTTAATCAAAGGGTTGGTAGAGGGAGAACAGTTTTCAGAGGTGGAAGCCATTGCTTACATAGAAGAA GCTGCTGCTAAACCCTTATAATTTGGACATAGGTGTGTTATTTCCTCTGGCAGTGCACGTTCTGTAACAGCTTTGTATTACAGAAGAGTAGGATATATTT GTAGTTGACGAAAACCCTTATGGTATGGCTTCAAGGATCATAACAGCGTTGGATTGCATATATAGTTTTGAAGGGCATTGATATTTGCCCCTAATAGTTA GGGTGATTGGTAGTGTTGAAATCTTGATAACTACGCTCTCTTCCGCTTACTGTAATATTCAAAATGATTGAATTGCATTTATGGCCTTCTGTAGTTTTTC TAAAAAATGCTCATTAAATTATAAGTCTGAAA
• Tissue: flowers
• Gene name: LI_gene_19143;
• Additional information: details;

Expression of Ll_transcript_82068

FPKM

• FPAB: 3.7
• FPNAB: 4.4
• LF1: 2.7
• LF2: 4.6
• LF3: 2.7
• LF4: 3.7
• UF1: 4.1
• UF2: 3.8
• UF3: 2
• UF4: 6.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_82068

• Blastp: Histone deacetylase 5 from Arabidopsis with 61.88% of identity
• Blastx: Histone deacetylase 5 from Arabidopsis with 62.14% of identity
• Eggnog: Histone deacetylase(COG0123)
• Kegg: Link to kegg annotations (AT5G61060)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451711.1)
• Pfam: Histone deacetylase domain (PF00850.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;