Ll_transcript_82072

• Id Trinity: FTRINITY_DN49838_c0_g1_i3
• Name Transcript: Ll_transcript_82072
• Sequence: ATTACATTACTTTTGTTTTTTTTGTTTTAGAGTGAATAGTTACTAACAAATCAATGATAGATTATTTGCTGATGGTGTATAAAACACTTACACCGTCAAT GTTTATCGCTTTACTACGAACTCTCCGAATTCCTCAAGAGAAATGGGGGGAAATTGGTAGCAGAAACAAGTGTGTTTTCAAATTCAATTTCGCCCAATAT TCGTGTCTTTTCAATTTCAATTTCAATTTCGCCCAATATTTCTATAACACCTCAAACTGAAAGAAAAAAACAAGTAGCTCAGAAACTGAACTATGGCTTC TGCGGTTACGAACAATGGCAACGAAGTCAACGGTCAACGACGTGTTGGTTTACTCTACAATGAAAAAATGTGCGACCATTTCAATTTACACGATCCTCAC CATCCCGAAGCCCCTGACCGAATCAGAGTCATATGGAACAAGCTTAACAAAACTGGTATCTGCGATCGATGTGTGATATTGGATGCCAAAGAAGCTGAAG ACAAATATATACAATTGGTGCATTCCAAAAGTCATGTAAATCAGATTAAGCACATCAGCACAAAACAATACGATTCTCGAAGGCATAAGATTGCGTTAAA ACTGAATTCTATATATTTTAATGAAGGTTCATCAAAAGCTGCTTATCTCGCTGCTGGCTCTGCTATTGAGGTTGTTGAAAAAGTGGCAAGCAGGCAATTG CATTCTGCTGTTGCTATTGTGAGGCCTCCAGGTCATCATGCTGAACATAATGAAGCCATGGGATTCTGTCTATTCAACAATGTTGCAATATCTGCTTCTT ATCTCTTAGATGAAAGACCAGAATTAGGTATCAAGAAAATTTTAATTGTGGATTGGGACGTCCATCATGGAAATGGTACTCAAAAAACGTTCTGGAATGA TTCCCGTGTCTTATTCTTCTCTGTTCACAGGCATGAGTTCGGAACTTTTTATCCATGTGGTGATGATGGCTCTTATACCATGGTTGGAGAAGGAGCCGGG GCTGGATATAATATAAATGTACCCTGGGAGAATGGGAGATGTGGTGATGCTGATTATTTTGCAGTGTGGGACCACATTTTGCTCCCGGTTGCCAAAGAAT TTAGTCCAGACATAATTATTGTCTCTGCTGGATTTGATGCAGCTGTTGGTGACCCTCTGGGTGGATGTCGTATCACACCATTTGGTTATTCTGTTCTGTT GGAAAAGTTGATGAATTTCGCTGAAGGTAGGATAGCACTGGTTTTAGAAGGAGGATATAATCTGGACTCCATTGCAAACTCAATGCATGCTTGTGTTGAA GTTTTGCTTGAAGGCAAACCTGTTACCGAATCTTCAGAGGCTTACCCATTTGAGTCCACATGGCGTGTGATTAAAGCGGTTCGTCAGGAGTTAAGTCCCT TTTGGCCTTGTCTTGCTAGTGAATTACCAAAGGATTTAATTTGTCTAGTTGCACCACCTCCGCATAATCTTATTTCAAGCTCTGACTCTGAGACGGAGGG TGACATGGATCCCCTCAATTCTGATAACCTTGAAGAGCTTCTTCAGGATGTCATAATACCACTATCTAACCTGAAAGTTGATACAGATCAAGAGATTGGT ACTTCTAATACTTGGCGATCAGAATTGTCAAATACTTACATATGGTATGCCTCTTATGGATCAAATATGTGGAAATCAAGATTCTTGTGTTATGTAGCAG GTGGACAGGTGGAAGGTATGCAAAAGCACTCTTCTGGTGCAGTGGACAAAGCTCCACCAAAGGAAATCCTTTGGAAGACTTTCCCTTGCCGTATATTTTT TGGCCGCAATTCTTCCAAGTCATGGGGTCCTGGAGGGGTTGCATTTTTTAATCCTGAGAGAACTTTTCAGCACAATACCTACCTATGCCTGTACAAAATT TCGCTAGAGCAGTTCAATGATGTTTTACTTCAGGAAAACGGTTTAAGCCTTAATGTGGGTTCTCCTTTATTTGATATAACTGCCCTTAATGCTATCTCAG AGAAGGAGTTCAATTCTTCAGAGGCTGTGAAGGGTTCTTGGTATGGTGATGTTGTCTACTTAGGAAAGGAGCATGATATCCCAATTCTTACCATGACGTG TTCATTTCTCGATATCCAACGCTTTAAAACGGGGGAGCTGCCACTGAATGCTCCTAATAAAGCTTATGCCAACACCTTAATCAAAGGGTTGGTAGAGGGA GAACAGTTTTCAGAGGTGGAAGCCATTGCTTACATAGAAGAAGCTGCTGCTAAACCCTTATAATTTGGACATAGGTGTGTTATTTCCTCTGGCAGTGCAC GTTCTGTAACAGCTTTGTATTACAGAAGAGTAGGATATATTTGTAGTTGACGAAAACCCTTATGGTATGGCTTCAAGGATCATAACAGCGTTGGATTGCA TATATAGTTTTGAAGGGCATTGATATTTGCCCCTAATAGTTAGGGTGATTGGTAGTGTTGAAATCTTGATAACTACGCTCTCTTCCGCTTACTGTAATAT TCAAAATGATTGAATTGCATTTATGGCCTTCTGTAGTTTTTCTAAAAAATGCTCATTAAATTATAAGTCTGAAA
• Tissue: flowers
• Gene name: LI_gene_19143;
• Additional information: details;

Expression of Ll_transcript_82072

FPKM

• FPAB: 7.2
• FPNAB: 8.2
• LF1: 5.9
• LF2: 3.7
• LF3: 6.7
• LF4: 5.7
• UF1: 3.9
• UF2: 4
• UF3: 7.3
• UF4: 4.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_82072

• Blastp: Histone deacetylase 5 from Arabidopsis with 61.65% of identity
• Blastx: Histone deacetylase 5 from Arabidopsis with 61.65% of identity
• Eggnog: Histone deacetylase(COG0123)
• Kegg: Link to kegg annotations (AT5G61060)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451711.1)
• Pfam: Histone deacetylase domain (PF00850.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;