| Id Trinity | FTRINITY_DN49838_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_82074 |
| Sequence | TTTCAATTTCATCTTTTATTTCCTATTTGTTTATGTTTTAATTCTTTTATCTTATGCCTACATTGTTCAGCTTTAATTAGTTCGTGGTTAATGTACTTTA TTATTTTAATTGTTTCTTTTTAATAATCATGAACTTCCTCATATGTGTTTTTAAATTAAGCATGACACAACTTATAGCATCCATTTCAAACCGAATGATG TATAGCAATATTTTAGTAGGAAAAGTTTTGGCATTAAACAGAACCACGTTGTAGGAAACTCTAATATCTTGAAATTCATTAAAGTAGTTGTGATTTTGTT TTGTATAATCGATTATCTAATTAGTTGTTTTAGTTAGTTAAGCTGAGTTCTGTATACAATAATTGATTATCAATAGGGTTAATTGATTATATTGTTAACA ATTTTTTCTCTTTTGTATTTTCTTTTCTTTTAGTATAAAAGGTCATTCTTGCACCTCTGTAATCCATTCAATTAATCAATGAGAATAATGAAATACAAAA GAAGAGTTTAGATTCTCTATCTTTTCTTCTTCTTCTTTCTTGAAGCCTCTTTAAGATTTTCTTTCTTTCTTTCTCATTCACTCATTTATCATCTTTCTTG TTTTATCAAGAATATTCATAGATGGCTCTTACCATCTTAACATAAACATTATAACAATATATACTCGTAGATAGTGCATAGCACAGATTCAAATAATTAT AGAAATTTGACATGACATTCCCATGAATTGCAATAACTTTTCCACACACATGAAATATTAAGTCACACCAAGGGGTAGGAGGAACCCTTTATCCGACCAC ATGTTATATCACTTATATGAATAGTTTTCACTCATTTTACTCTTAAACCTCAGGGTCTCATACTTAAACAAATAGATTCTATCCAATTAAAGCCTGAAGT ATGTATAATTGAAGCATTCATGATAAGATATTTATATATTTATATTCCTCCTTGTGGTTGAAAGTTGAAACTTGCTTTTTGGTTTTTTCCTTGAGGGTGA GCCGTGGTGCAATGCCGAGGTTGTTGCCTTGTGATCTGGGGTCACGAGTTGCAATCATGGAAATAGTTAGCTTGTGGGATGTGTGATATTGGATGCCAAA GAAGCTGAAGACAAATATATACAATTGGTGCATTCCAAAAGTCATGTAAATCAGATTAAGCACATCAGCACAAAACAATACGATTCTCGAAGGCATAAGA TTGCGTTAAAACTGAATTCTATATATTTTAATGAAGGTTCATCAAAAGCTGCTTATCTCGCTGCTGGCTCTGCTATTGAGGTTGTTGAAAAAGTGGCAAG CAGGCAATTGCATTCTGCTGTTGCTATTGTGAGGCCTCCAGGTCATCATGCTGAACATAATGAAGCCATGGGATTCTGTCTATTCAACAATGTTGCAATA TCTGCTTCTTATCTCTTAGATGAAAGACCAGAATTAGGTATCAAGAAAATTTTAATTGTGGATTGGGACGTCCATCATGGAAATGGTACTCAAAAAACGT TCTGGAATGATTCCCGTGTCTTATTCTTCTCTGTTCACAGGCATGAGTTCGGAACTTTTTATCCATGTGGTGATGATGGCTCTTATACCATGGTTGGAGA AGGAGCCGGGGCTGGATATAATATAAATGTACCCTGGGAGAATGGGAGATGTGGTGATGCTGATTATTTTGCAGTGTGGGACCACATTTTGCTCCCGGTT GCCAAAGAATTTAGTCCAGACATAATTATTGTCTCTGCTGGATTTGATGCAGCTGTTGGTGACCCTCTGGGTGGATGTCGTATCACACCATTTGGTTATT CTGTTCTGTTGGAAAAGTTGATGAATTTCGCTGAAGGTAGGATAGCACTGGTTTTAGAAGGAGGATATAATCTGGACTCCATTGCAAACTCAATGCATGC TTGTGTTGAAGTTTTGCTTGAAGGCAAACCTGTTACCGAATCTTCAGAGGCTTACCCATTTGAGTCCACATGGCGTGTGATTAAAGCGGTTCGTCAGGAG TTAAGTCCCTTTTGGCCTTGTCTTGCTAGTGAATTACCAAAGGATTTAATTTGTCTAGTTGCACCACCTCCGCATAATCTTATTTCAAGCTCTGACTCTG AGACGGAGGGTGACATGGATCCCCTCAATTCTGATAACCTTGAAGAGCTTCTTCAGGATGTCATAATACCACTATCTAACCTGAAAGTTGATACAGATCA AGAGATTGGTACTTCTAATACTTGGCGATCAGAATTGTCAAATACTTACATATGGTATGCCTCTTATGGATCAAATATGTGGAAATCAAGATTCTTGTGT TATGTAGCAGGTGGACAGGTGGAAGGTATGCAAAAGCACTCTTCTGGTGCAGTGGACAAAGCTCCACCAAAGGAAATCCTTTGGAAGACTTTCCCTTGCC GTATATTTTTTGGCCGCAATTCTTCCAAGTCATGGGGTCCTGGAGGGGTTGCATTTTTTAATCCTGAGAGAACTTTTCAGCACAATACCTACCTATGCCT GTACAAAATTTCGCTAGAGCAGTTCAATGATGTTTTACTTCAGGAAAACGGTTTAAGCCTTAATGTGGGTTCTCCTTTATTTGATATAACTGCCCTTAAT GCTATCTCAGAGAAGGAGTTCAATTCTTCAGAGGCTGTGAAGGGTTCTTGGTATGGTGATGTTGTCTACTTAGGAAAGGAGCATGATATCCCAATTCTTA CCATGACGTGTTCATTTCTCGATATCCAACGCTTTAAAACGGGGGAGCTGCCACTGAATGCTCCTAATAAAGCTTATGCCAACACCTTAATCAAAGGGTT GGTAGAGGGAGAACAGTTTTCAGAGGTGGAAGCCATTGCTTACATAGAAGAAGCTGCTGCTAAACCCTTATAATTTGGACATAGGTGTGTTATTTCCTCT GGCAGTGCACGTTCTGTAACAGCTTTGTATTACAGAAGAGTAGGATATATTTGTAGTTGACGAAAACCCTTATGGTATGGCTTCAAGGATCATAACAGCG TTGGATTGCATATATAGTTTTGAAGGGCATTGATATTTGCCCCTAATAGTTAGGGTGATTGGTAGTGTTGAAATCTTGATAACTACGCTCTCTTCCGCTT ACTGTAATATTCAAAATGATTGAATTGCATTTATGGCCTTCTGTAGTTTTTCTAAAAAATGCTCATTAAATTATAAGTCTGAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_19143; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_82074
| Blastp | Histone deacetylase 5 from Arabidopsis with 61.88% of identity |
|---|---|
| Blastx | Histone deacetylase 5 from Arabidopsis with 62.14% of identity |
| Eggnog | Histone deacetylase(COG0123) |
| Kegg | Link to kegg annotations (AT5G61060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451711.1) |
| Pfam | Histone deacetylase domain (PF00850.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |