| Id Trinity | FTRINITY_DN49840_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_81761 |
| Sequence | GAGGCTCCTATGGGTCTGGACTCTGGAGCACAGTCTTTCCTCTAAGTAAAGTGATTACGAGGCATGCAACCTTATCGTTACGGTCACTTTGAAACAAAGG GTGCTTCTGGTTCTGTCAGAGCTTGAAACAATTTTGTCTTTTCCATATTACTTATTATTATATCTCTAGAGTTAATAATTTTATGTGAAGAATTACTTAA CTCAATTACTTGCATATCACCCTTTGAGTGGATCTCTGGACATGCACAACTAAAATTGAAATAAAATATTCAAAGCCTAAATCAAAGCTATTTTATTGAG AAACGATTACGACTTTTCAAACAAAAGATCTCCTTTATAAATTAAATCATTTCTAGCACATGAGATTTTCAAATTTATGTCATTCTGATTCTGTCACTTT TTTGCAGGAGTGAAGAATGTAGAGGTGGACTTGAGCAATCAGGTAGTTAGAGTTCTTGGTTCAACACCAGTGAAGACCATGACGGAAGCTCTGGAGCAGA CTGGTAGAATAGCCCGATTAATCGGACAAGGAGTTCCAGAAGACTTCTTAATATCGGCTGCTGTTTCCGAATTCAAAGGTCCAGATATTTTTGGCGTTGT TCGCCTGGCTCAAGTAAACATGGAACTAGCTAGGGTTGAAGCCAACTTTAGTGGGTTGTCACCAGGAAAGCATGGATGGTCTATTAATGAGTTTGGAGAT CTGACTAGAGGTGCAGCAAGCACTGGTAAATTGTTCAGTCCAACAAATGAGAAAGATGCTAAGGTTTGCTTTTCCACATACCTTACAAACTGCTATTTTT CCTCAAATTTTCTGTAAATGTTTCGTTTAAGGATTGGTAGCTTGTGTGTGTATATATTTAACTAACGGATAAAAAGGTTAGTATAATGAATTATTTTTTG CAAACAGAAAGTGTATTTGATGCTCTATCATGTCTATAAAGTGAATTGGATCTTTCTGTTGATTGTGGCTGATTATTTTCCTCTATCTTGTCATGTTTGG CATTGCATTACTGAAATTTTATCAGCGACTGATCTATTTTAATTTGAGTGTCAATGTCTGGCACACCGTTATAATATAACAAATATAGCTCTTCCATTTT CTTGCAGTTTGTATTCCCTTCTATAAATCTTCCATGGTACTTTTTAGAAATTCCTAATGGGGTTGCTTGATTGATTCTCCAGCCAGTTGGTGACCTGGGA ACACTAGATGCTAACGAAAAGGGTGAGGCTTTTTATACCGGGGTCATAGAAAAACTGAGGGTGGCAGATCTTATTGGACGAGCTGCGGTAGTATATGCAA CTGAAGATAAATCAGAACCCGGTATAGTTGCTGCTGTAATAGCTAGAAGTGCAGGAGTGGGTGAGAACTATAAAAGATTATGTACCTGTGATGGCACCAC CATATGGGAGGCAAGTGACAGAGATTTTGTTACTAGCAAGGTCTGATAAAGTAATTCACTGAAAACAAAATAAAGGGAATAGATGCTTTCATGTGATCTT TCTTATCATGTGGCCTTTGAATGAGATATAGACACAAAGGTTTAAAAACAAGTTTACAAATCTTGACTGGATTCATTAATAAATTGTGTTATCTCTCTTC TACATCACCACATGACAGGAAAAAGCATGAGATCTATTCCCACAAAACATTGTAAGATTTAGATGCCTTGTCACCCTCCAGTACTTGATTTCTTGAGGGA TTTGTACACTATTGAAAAGGATTGCATTTATAGGCCATTTACAATACTTTGACATGTTAATCAAACATGTTTTCATAGAGACAACATCAACAATATCCTT TTCATTCTTATTTGCTATTGCTTTCAGAGGAAAACTGCAAAAATTAGCACGCACCTAATTGAATGAAACATTGTAGCTTCTAATTAAACTCATCCAACTT AAAAGCAAGTATATTGACACAACTGCGGCTTGTGTTTGGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_19148; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_81761
| Blastp | Copper chaperone for superoxide dismutase, chloroplastic/cytosolic from Arabidopsis with 80.68% of identity |
|---|---|
| Blastx | Copper chaperone for superoxide dismutase, chloroplastic/cytosolic from Arabidopsis with 76.72% of identity |
| Eggnog | heavy metal transport detoxification protein(COG2608) |
| Kegg | Link to kegg annotations (AT1G12520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446629.1) |
| Pfam | Copper/zinc superoxide dismutase (SODC) (PF00080.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |