Id Trinity | FTRINITY_DN49840_c1_g1_i4 |
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Name Transcript | Ll_transcript_81762 |
Sequence | GATGAATCTAGAAGGAGGTATGAAGATGAAACCGTGGGAATTTTAAGGTGGGCACGTTGAAAAAAATTATGGCATTTCTGAGGTCAGTGGCTATTGCTGC ATCTGCTATTCCTGCTGCTTTGGCTCTTTCTTCTCTTTATTCCTCTTCTCGATCCCCCTATTTCCCTTCTCATCCTAATCGTTTCCCACTCCTTAAATCA TTTGCTATCTCTCCCTCACCTCTCCGCATGGACCCCAACCCCACTTCTCAGTATGATGCTGCTGGATTTCCAGAGTTACTGACGGAATACATGGTGGATA TGAAATGTGAAGGCTGTGTTAATGCGGTTAAAGATAAGTTGCAGACAATCAAGGGAGTGAAGAATGTAGAGGTGGACTTGAGCAATCAGGTAGTTAGAGT TCTTGGTTCAACACCAGTGAAGACCATGACGGAAGCTCTGGAGCAGACTGGTAGAATAGCCCGATTAATCGGACAAGGAGTTCCAGAAGACTTCTTAATA TCGGCTGCTGTTTCCGAATTCAAAGGTCCAGATATTTTTGGCGTTGTTCGCCTGGCTCAAGTAAACATGGAACTAGCTAGGGTTGAAGCCAACTTTAGTG GGTTGTCACCAGGAAAGCATGGATGGTCTATTAATGAGTTTGGAGATCTGACTAGAGGTGCAGCAAGCACTGGTAAATTGTTCAGTCCAACAAATGAGAA AGATGCTAAGGTTTGCTTTTCCACATACCTTACAAACTGCTATTTTTCCTCAAATTTTCTGTAAATGTTTCGTTTAAGGATTGGTAGCTTGTGTGTGTAT ATATTTAACTAACGGATAAAAAGGTTAGTATAATGAATTATTTTTTGCAAACAGAAAGTGTATTTGATGCTCTATCATGTCTATAAAGTGAATTGGATCT TTCTGTTGATTGTGGCTGATTATTTTCCTCTATCTTGTCATGTTTGGCATTGCATTACTGAAATTTTATCAGCGACTGATCTATTTTAATTTGAGTGTCA ATGTCTGGCACACCGTTATAATATAACAAATATAGCTCTTCCATTTTCTTGCAGTTTGTATTCCCTTCTATAAATCTTCCATGGTACTTTTTAGAAATTC CTAATGGGGTTGCTTGATTGATTCTCCAGCCAGTTGGTGACCTGGGAACACTAGATGCTAACGAAAAGGGTGAGGCTTTTTATACCGGGGTCATAGAAAA ACTGAGGGTGGCAGATCTTATTGGACGAGCTGCGGTAGTATATGCAACTGAAGATAAATCAGAACCCGGTATAGTTGCTGCTGTAATAGCTAGAAGTGCA GGAGTGGGTGAGAACTATAAAAGATTATGTACCTGTGATGGCACCACCATATGGGAGGCAAGTGACAGAGATTTTGTTACTAGCAAGGTCTGATAAAGTA ATTCACTGAAAACAAAATAAAGGGAATAGATGCTTTCATGTGATCTTTCTTATCATGTGGCCTTTGAATGAGATATAGACACAAAGGTTTAAAAACAAGT TTACAAATCTTGACTGGATTCATTAATAAATTGTGTTATCTCTCTTCTACATCACCACATGACAGGAAAAAGCATGAGATCTATTCCCACAAAACATTGT AAGATTTAGATGCCTTGTCACCCTCCAGTACTTGATTTCTTGAGGGATTTGTACACTATTGAAAAGGATTGCATTTATAGGCCATTTACAATACTTTGAC ATGTTAATCAAACATGTTTTCATAGAGACAACATCAACAATATCCTTTTCATTCTTATTTGCTATTGCTTTCAGAGGAAAACTGCAAAAATTAGCACGCA CCTAATTGAATGAAACATTGTAGCTTCTAATTAAACTCATCCAACTTAAAAGCAAGTATATTGACACAACTGCGGCTTGTGTTTGGT BLAST |
Tissue | flowers |
Gene name | LI_gene_19148; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_81762
Blastp | Copper chaperone for superoxide dismutase, chloroplastic/cytosolic from Arabidopsis with 66.29% of identity |
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Blastx | Copper chaperone for superoxide dismutase, chloroplastic/cytosolic from Arabidopsis with 66.29% of identity |
Eggnog | heavy metal transport detoxification protein(COG2608) |
Kegg | Link to kegg annotations (AT1G12520) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446629.1) |
Pfam | Heavy-metal-associated domain (PF00403.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |