| Id Trinity | FTRINITY_DN49841_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_81977 |
| Sequence | CTGGTTTGATAATTTGATGATTAGAGAGATGTTACTTTGATTTGAATAAAATATTTTTTTGGGTAGTATTATGAAGCTTTTCTGTAGTTTTGCATGGTTT AATAGGAACTTGATGTCATTTGATGACTCTGCACAAGCTTTATAAACTATTGGATAGCTTCCTTAGACTTGACAGTACATTAAATGTTACACTGGTACCA GGAAATTGATGAACCAGCATTGATTCCTCATATAGCTGAAGCTAGCTCCAACAAATATCCATATGAGGTCCTATTCAGGAGCTTGCAGAAGCTTCTCATG GATACTGCTACTTCAGAGTACTTTACAATCCACTGTGCCTGTCGAGCTTGTCATATAAAATGCTAATGTACATAAAGTCGCTATTGATTTGTATTCTGAC GTCATTTTCTTTTATCTGCAGATATAATTTCTGTGAAGATTTCTTTGGAGAACAATCTATATTTTATGAAATCTTTTCAGGTCCATTTGGTGTCATTGAT GAGCACTTCAATTTAATACTTCCAAATTGCTATGATGCTATAGGCCTCATGCTTATGATTCGCATAATACACCAGCACCAGCTCATCATGTCTCGTAGGC GGATTCCTTGCTTGGACTCTTACTTAGACAAGGTCAATATTTCCCTATGGCCTCGATTTAAAATGGTGTTTGACATGCACCTCAGCAGCCTGCGTAACGC AAGTGTGAAGACGTTATGGGAAGATGATGTTCATCCTCACTATGTTATGAGGCGTTATGCTGAGTTTACTGCTTCCCTTATCCACTTAAATGCTGAGTGT GGAGATGGCCAGCTTGATTTGAATTTGGAACGACTTAGAATGGCTATTGATGATTTGCTTATCAAGCTCGCAAAGAACTTCCTGAAACCAAAACAACAAA CAGTGTTTCTTATAAACAATTATGATATGACAATCTCTGTTCTGAAGGAAGCAGGTCCCGAAGGTGGGAAAATTCTAATGCATTTTGAGGAATTACTGAA GAGCAATACAGCACTATTTGTGGTAACTACAATCATTTCTTGTCTATTTAGTTTCACTGTGATGATAAGTTTATGTAACTGCAATCATTTCTTGAGGAGG GACCAGGAGGCATCATTTTTTTTATGTTGCGAAATTGAGTTTCATAGTGAAGAAAGGGGGTCCTATTGATTATCTAGGATACATAATTTTAATTTCCCAC GTTTTCTCATTTGTGTCCTTGCAGGAAGAACTGCTTCAAGAGCATTTCAGCGATTTAATCAAGTTTGTCAAGGCCAAAGCCTGTAAGTATTATAAAAATG ACACTATGCTAACATAGTCATTTTTTGTTATGGTCAACTGCCATAACGTAGGTAGCATTTGTTAGTTATGTATGTTCTGTACTGTGATTGGTGCATTCTA TGAACGGAATATAACAAAAGGCTAAAAATTAGAATGTTTTCGTTCGAAAGAGAACAGAACATCTTATTTGGTCTTATCATTCCGTCCTGTTTTGTTTATG CATCAAATGCTAGGTGATTTTTCATTTTGGAAAATATGGGTTGATTGCGTTGTTTTTCAGCCGAAGACTCAACGTCTAGCCCGGATAAGCCCATAACTAT TGCAGAAGTGGAGCCACTAGTGAAGGATTTTGCAAGTAGGTGGAAGGGTGCAATAGAGCTGATGCACAAAGATGTGATAACTTCTTTCAGCAACTTCTTG TGTGGTATGGAGATATTAAGGGCTGCATTGACTCAGTTGTTGCTTTATTATACCAGACTCTCAGATTGCATAAAGAGGATTGTTGGTGGCTCTGCATTGA ACAAGGATCTTGTTTCAATATCTTCAATCATGTATGAAATTAGAAAATACTCTAGGACTTTCTAATTTCTTCAGCTTATATCTAACTACCAAACTTTACT CCTCATGGTTATATACTCAATTTATAATATGTATCACAAAGTTTCCTTTTGGACCCTCAATGTTGAAGATATTTTTTGTACAAGTTGTTTGCTGCAAAAT CCATAAATCCAATCAACGTGTATAAATACATGCCAATATTTCTCTGCCTTCCTTAGTTCTCATTTTTAAAAAGACTCATTTTTTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_19150; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_81977
| Blastp | Vacuolar protein sorting-associated protein 52 A from Arabidopsis with 84.16% of identity |
|---|---|
| Blastx | Vacuolar protein sorting-associated protein 52 A from Arabidopsis with 77.53% of identity |
| Eggnog | vacuolar protein sorting 52 homolog (S. cerevisiae)(ENOG410XNZ1) |
| Kegg | Link to kegg annotations (AT1G71270) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420934.1) |
| Pfam | Vps52 / Sac2 family (PF04129.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |