| Id Trinity | FTRINITY_DN49917_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_199480 |
| Sequence | CAAGACAATACAAGACAAAACGAATTCAAGCCTTCAAAACTTTTGCAAGCTTTGTAAAACTTTCATTAAACCTTGAATACAAAAATTCCTTTGAGTAAAC TTTAGTCTTCAAGTAATTAAATTCTGTTTCAGTTGCGAGATTTTATTTAAAGTTTGAAATATATTTTGTTCTTATTAAATACTCAAAATGACTACTATCA ATATTGGAACAATCCCAGTCACAATTAAGCAAAACGCTGACGTCCAGATGGTCGAAAGCACCAAAAAGATTTTTCCTTTTGTTAGTGTTTCTATTAATCC TTTTGTTGATTTGGAAGCTAAGTGTGCTGAGCGGCTGAAGCGTATGGGAGAACTTTGTTTCTCACGCAAAGGGCGTTATACTACAATGATCCCTAAACCT GATCATGTTAAAGCTGCAGAAAAGCAACAATTTGAGGAAGAGCTGAACTTCCAAAATAGTGAACACATCTTAAGTTCACTTGGAGCTGACCACACTCCCA AGCAGTATCTTGCAGGGAGTAAAGGGGAGCAAGTATCATTCAAAACACACCATTATAAGAAAAGCACTAAGAAACCTTGCATACAGGCGAGGAAGAAGGA GCTAAAGGGCCAGCGTAAAATACACTATATTACTAGGGAACTTCTTAACATCGTCAAAAAGAAAGATCTAGTGTTGGAAGTGGTCGATGAGCGCAAGCGT GCCAATTTTGCAACTTTCATGAAGTACGGAAAGACATACGGCATGCACGTAACTCTGAACCACATGGTGAGGAAAAGGCGCAGAGTTGATGTCACTCTGA ACAGACTAATGACAGAAATTGCCACATATTGTGCAATTCCATTCGAATGTTTGGAAACATTAACTCTCAGAGAAGGACACAGTGGACTTGTTTTGAAAAC CGAGACAGTGCCCAACATTCATAGCAACAAATCACAAATAACTGTTGTTAGGGGGTTAGTGAATGAAGATGGTATTCCAGTTCTTGTTGATGCAAGAAAG AGATTAACTTACAGAGCTATGAATGCCATTAGAGAATTCTCCGCTGGTGGTCTGTTTTGGAAAGGGTACAATCAGACATTCATTGACAATCGACCAGCCA ATCTGAATCATCAGTGTACATCTGATCTAAATGTGACACAATGTGGGTCAGTGATGGCACTGTTAACTCTAGCTTTGTTTCCATGTGGCCGTATCACTTG TAAGAAGTGCGTTGACAACTTCCTCAACCAGAATAACAAGGAAAGGTTTGAGAGTGCTAGTGTTTTCATTAACCAAGCAATCCAACTCTTAGATAGAGGA TTCCCAGAATTCAAGCATTCAAAGGAAATTCTGTTGATGTTTAAAGAGAGGTTACAGATGGAAAATCCTGCTAGTGCGCAGTGCTTGGAGGTTGCCAAAG CCATAACATCACTGCCGGAAGCACCATTTAGCCATATCAAAGAAATCAACAGTGTTTTGTTAAAGTATGGGAGTCTCAGCAATAATGAGGTGGGTGATGC AAGTAGGCATTTGCTTGAGGTGACTCGATATCTGAAGAATAGGACTGATTCAATTCAGAGGAATGATCTTAGCAAGTTCAGAAACAAGATTTCCTCTAAG ACGCACATAAATCTAGATTTAATGTGTGACAATCAACTGGACAAGAATGCAAATTTTGTCTGGGGACAGAGAGCATACCATGCCAAACGTTTTCTCAGTA ATTACTTCAATGAAATAGATCCATCGGAAGGATATGACAAATTCATCTTCAGAAAATTACCAAATGGGATGCGAGAACTAGCAATTGGCAGACTCATTAT GCCAACTAATTTCGAAGCATTTAGAGAACAGATGAAAGGGAAAATGATAGACAATGGACCTATAGGCAAGGAATGTGTGTCGCGCATGAGAGGTTCATTT TGTTATCCATGTTGTTGCACAACTGATGATGTGGGGACCGCAGTTATTTCAGACTTTAAGATGCCCACAAAGTATCATTTGGTGCTAGGTGGAAATGATC TTGCCAAGTATATAGAATTGCCCACGGACACTACAGGTAACATGTACATAGCAAAGGATGGGTTCTGCCATATCAACATTTTCTTTGCCATGCTAGTGAA CGTTTCAGAGGAGAAGTCCAAAGACTTCACGAAGATGGTGCGTGATCAAATCATGCCTAAGTTGGGTGAATGGCCAACGATGATGGATGTCGCTACAGCC TGTTGGCAATTAACAGTTTGGTTTCCCGATACTTTAAGTGCTGAGTTGCCACGAATTCTAGTTGATCACAAGCTCGGAATCATGCATGTCCTTGATTCAT ATGGTTCTATTAGCGCAGGATATCATGTTCTAAAAGCCAACATAGTGTCTCAGCTAATCAAGTTTGCTAGTGATGATCTCGAATCTGAACTGAAGTATTA TAGAGTTGGTGGCGATCAGAATTTCGGCAATCGAATTCGAATTGACACAAAATTCCTTCTCAAGAGTATATATAAACCTGATCTGCTAGAGAGAATCATA GAGCATGAACCATTTTTACTAGTGTTGGCCATGCAGTCACCAGCTGTTCTGTTAGCTCTCTTTAACAGCGCTTCACTAGAGAAAGCAGTCCAGTACTGGA TACACAGGGAAATGCAGGTTTCACATATAATGACACTGCTGGCTGTCTTAGCTTCAAATGTGAGTGCCTCGAGGCTATTGACCACACAATTTGAAATCAT TGAAGCGAGTGCACCTCAGATTCTCGCGGAAATGGACAAGGTTCACCAACCCATGCATTCGATTCATAGCGCCAATGTTTTCCTAATGAATATGAGTGAA AGCCGTGAAACCGACAAGACAATAGATGAATTGGGCTTTTATTCATTCAAGAAATCCAGCAGAATTTTAATGGAAAAAACCTTAATGGCGGATTTGGAGG AACAATGGCAAGGATTAGGATTGTTGGAACGATTGTCTTTAATAAAGCGATCGTGGCGAGTGCGAGCAAAGTATTCAAGCTTTGCCATCCAACGAGAAGA ACCAGGTATAAGAGACAAGTTCACAACCTCACTCAGGTTATCAGGGGCTCAAGTAAAACAACAGTTGCTTGCTCAGAAGGATCAGATTGTCCATTTTGCA GAGAGGCGGGCTGAAAGTGCTAAGAAATTTGTTGCAAACCAGTCTATAAGCCTTGTTAAGATGTGTTTACCAAGACTTGCTGACATTGTGAATGTTTTGT CAGTCATCACATTGCTTAATGCCATATTGGTATTCATGTTAGACCACATCAAGAGGTTTAATGAGGCTAGGAGGGTAGCCCAAGAGAAGAAAGAGAAACA ACATTTGAAGGAGTTAAGTGTATTGTACAACAAGTATTGGTACAGTGAAAGGCCAACATACTTGGAGTTCAAATCTGACGTGATGGAAAAACTACCACAT GCACTTGGCACTTTTGAAAAACATTACTCAGAGGATGACAAGTACACTTTTCAAGCTAAGCCAAACGACATGATCGCTCTGGAAAAGATTGTTGCAGTGA CAGCTCTAATTCTCATGATCTTTGATGCGGAGAGGAGCGATTGTGTATACAAAGTTCTCAATAAGCTGAAGGGTATCTTATCAACCACCACACAAGACAT GTACAAGTTTCAGAGCCTGGACACTTCAAAAACCCTCTTGGAGGATAAAAAGATGACTATAGATTTTGAGGTGAATGAAGGTGAGATGAAATCTTTTCCA GGTACACAAACAACCTTTGCAGACTGGTGGGATAACCAATTGCAGAATGGAAATGTTATAACTCACTACAGAACAGAAGGTCATTTCATGGAGTTTACAA GGGCAAATGCGCAGCCAGTTGCAAATGAAATTGCGCACAATGATGCAAGAGACATACTCGTGAGAGGAGCAGTGGGTTCAGGGAAGTCAACTGGTTTACC ATTTCACTTGAGTAATAAAGGAAAGGTCCTGATGATTGAGTCAACTAGGCCTCTGGCTGAAAATGTTTTTAAACAGTTGAAGAGTGAACCTTTTTATGCG AGCCCAACACTCAGGATGAGAGGGACAACGAGTTATGGAGCATCACCAATCACTATAATGACTAGTGGTTACGCACTGCACTATTATGCCAATAATCCTA CTTTGATGAAGGAATACAAGTTTGTTATTATAGATGAGTGCCATGTGCATGATGCTAACGCAATTGCATTTGTTAGCCTTTTGAAAGAATACTCGTTTGA AGGTAAACTCATCAAGGTATCAGCAACACCTCCGGGAAGGGAAGTTGAGTTCACAACACAATATCCAGTGACATTGGTGACAGAGGAGAGCCTATCATTT GAACAATTTGTTTCCCAACAAGGCACTGGGGCCAACTGTGATATGCTAGATGTTTGTGATAACATACTTGTTTATGTGGCGAGTTACAACGAAGTTGATC AGCTGTCCAAATTATTGCTCGAAAGGGGTCACATCGTCACAAAGGTTGATGGCAGAACAATGAAGAATGGGAAGACTGAAATTGAGAGTAAGGGTAGCAA ATCCAAGCGACACTTCATTGTAGCCACGAACATCATTGAAAATGGTGTAACATTGGATATAGAAGGAGTTGTAGACTTTGGATTGAAAGTGGTTCCAGAA CTGGATGTGGATAACAGATTGATGCGGTACACCAAGCAGAATGTCTCTTATGGGGAAAGAATTCAAAGACTTGGAAGAGTTGGGAGACATAAAGCTGGCA AAGCCTTAAGGATCGGGATAACTGAGAAGGGACTTGTTAAACCACCAAGTGTTATCACAACAGAAGCAGCGTTTTATTGCTTTGCTTACGGTTTGCCCGT CATGGCTGAAGGGGTTTCACCAAGTTTATTGAGTAAGTGCACAGTGCAGCAAGCAAGAAGCATGATGAGTTTTGAACTGCCAATCATGTATACAGTAAAT TTGGTCAGATTTGATGGAACCATTCATCCAGCTATTCATAACTTGTTGAAACCTTACAAGCTAAGGGACTCAAACATAGTCTTGAATAAGATGGCAGTAC CACACGGAAGCATTAGAAGCTGGCCCACTGTAAGAGAGTTTAAGTACACTGGCGTGCGGATTGATGCACCAGAGGATGTGCGCGTTCCATTTTATGCGCG AGACATACCAGATAAGTTGCATAAAGAAATTTATGAAGCTTGCTGCAAATACAAGGGTGATGCTATGTTCAGTAAACTGAATGTAGTCAATGCGTGCAAG ATAGCATACACTCTACAAACAGATCCTTCTTCAATACAAAGAACTATAAAGATTCTTGATGAACTGATTGCTCGCGAGCAACAGAAGAGAGAGTATTTCC AAAATGTAGCAAACACCTCATGTGCTGGTTCTAGTTATTCTTTGGCCAACATTGTTAATGCTATCAGAGCAAGAAGCACAAGTGACTATACCCAGGAGAA CTTGAGTGTGCTACATAGCGCCAGATCACAATTAATGGAGTTCAAGAACATAAACAGTGACTTCTCAAACCTATCAACTCTGAGTGAGTTTGGAGCTCTT GAATGTTTACAGTTTGAATCATTGCAAGGGGTAAGCAAACACCTACAACTGAAGGGACATTGGAACAAGCCAGTTCTAGTCCAGGATTTCCTAATTGCAG CAGGAGTGCTCGGAGGAGGTTGTTGGATGCTTTATCAGTACTTCAAGCAAGAAACGGGAAAAGAATTCATATTCCAAGGAAAGAACAAAAGAACAAAGCA GAAACTGAGATTTCGAGATGCCAGGGATATGAAAAATCGTGTGGAGGTCTATGCGGATGAAGGGACCATAGTTGAAAACTTTGGTAGCAAATACACAAAG AAAGGAAAAGTAAAGGGTACTACAGTTGGCATGGGCACAAAAACCAGGAAATTCACAAATATGTATGGTTTTGATCCAACTGAGTATTCTTTTGCTAGAT ACCTCGACCCCATCACAGGTGAAACTCTAGATGAACAGCCCATAACAAACTTAGACCTTGTTGCTGAACATTTCAAAGAGCAGAGAGTGAAGTACTTGGA AAATGATATCTTGGATTCGCAACACTTCACTTCAAGCCCTAGAGTTGAAGCATACTTCGTCAAGGATGCGGGACAAAAAGTTTTGAAGGTTGACTTAACA CCACACAAACCTTTACTTTACAGTGAAAAGTTTGGAAACATAATGGGCTACCCTGAGAGAGAAGGTGAATTGAGACAGACTGGCACAGCTGAATTTGTTG ATTACAAGGAGCTACCCAAACCAAAAGAAACTGCAGACTTTGACTTTGAGAGTCTTAGTAAAATAGGAGGGTTACGAGACTACAATCCAATAGCTTCTAA TGTCTGCTTGTTAGAGAATGAATCAGCAGAGCACTGTGATGAGATATTTGGTATTGGGTATGGAAACGTGATCATAACAAATCAACATTTGTTTAGACAC AACAATGGAGAGCTAACCATTAAATCCAAACATGGAACCTTCAAGTGTAAAAACACTTGCGCACTTAAGTTGTTACCAATAGATGGCCATGATCTACTTC TTATTCAAATGCCAAAGGATTTCCCCGTGTTTCCACAGAAACTTAGGTTCAGGGAACCAACGCATGAGGATAAGATAGTTCTTGTGAGTACGAACTTCCA GGAGAAGAGTTTTTCAAGTGTGGTGTCAGAATCCAGCAACATATCGAGAGTCAAGAAAGCTAATTTCTTCAAACATTGGATCTCAACAGTGGCCGGACAA TGTGGCAATCCTATGGTTTCTACCAAGGACGGATTCATAGTAGGGATACATAGCTTGACCGCGATTTCAGGCGACCTCAATGTGTTCACATCCATACCAC CAAACTTCGAGGATGAAGTGCTGAAGCAAATGAACAAAAAGAACTGGTGTCGTGGCTGGAAGTTGAATACATCACAAATTGGATGGGATGGAATTAAAAT TGTAGATGACCAACCAAAAGATCCATTTCCAGTTTCAAAAATGGCAGGATTGCTAAATGACTTACAATTGAGTTTCCAGAGTGCAAAGAATACAAAGTGG CTAATGGAACGAGCCCATGGAAACATAAAGGCAGTTGCTCAGGCCCCCAGCGCTCTTGTCACCAAGCATGTGGTAAAAGGAAAGTGTAGTCTGTTTGAAG TTTACCTAACAACAGACGATGAAGCAGAAAAATTCTTTCGACCGTTGATGGGTGCATATCAAAAGAGCAGATTAAACAAGGAAGCATATGTGAAAGATTT GATGAAGTATGCGACCCCAATAGAGATTGGTCTTGTCGATACAAGGTGCTTCGAGAGGTGTTTTGAGAAAGTGCAACAGATGCTGGAACTAAAGGGTTTT AGCAAATGCAACTACATTACTTATGGACCAGACATTTTGAATGCTCTCAATATGAAGGCAGCTATGGGTGCTTTGTACTCAGGAAAGAAAAAGGACCACT TCTCGGAAATCAGTGAAGAGAGATTTGACAACATTTTGCAAGCAAGCTGTGAGAGATTATACAATGGCAAAATGGGTGTGTGGAATGGATCACTTAAAGC CGAGTTAAGACCACAAGAGAAGGTGCTTGCAAACAAAACTCGATCATTTACAGCAGCACCCATTGACACACTCTTGGCTGGCAAGGTTTGTGTAGATGAT TTCAACAATAAGTTTTATAGTCTACACTTGAAAATCCCATCTACAGTTGGAATAACAAAATTTTATGGTGGATGGAATCGGTTGTTGGATTCACTACCAG ATGGATGGGTGTATTGTGATGCTGATGGTTCTCAATTTGACAGCTCACTCACTCCATACCTTTTGAATGCTGTTCTTGAAATGCGATTGAGATTTATGGA AGAATGGGACTTGGGTGAACAGATGTTGAAAAATCTCTACACAGAGATTGTGTACACACCCATACTAACTCCAGATGGAACGATAGTCAAGAAGTTTAAA GGGAATAACAGCGGGCAGCCATCTACAGTGGTTGACAACACACTCATGGTGATCATGGCAGTCTACTATGCAGCGGAGAAACTTGGAATTGAGGGGCGCC TTGAAGACACACTTGTTTTCTTTGCCAATGGAGACGACTTGCTAATTGCCATCAAACCGGAGTGTGAATCATACCTTGACAAATTTGAAGGTCTATTTAG TGAGTTGGGGCTAAAGTATGATTTCAACAGCAGAACAAAGGAAAAAGGTGATTTGTGGTTCATGTCACACAGAGGCGTTCAGATAGATGGAATGTGGATT CCGAAATTGGAAGAGGAACGCATCGTTTCAATTCTGGAGTGGGATAGAGCTTTACAACCAGAGCATAGGCTTGAAGCTATATGTGCATCAATGATTGAGG CATGGGGCTATCCAGCTCTTTTGAACCACATAAGAAAGTTCTACCTCTGGGTATTAGGCCAAGCACCATATAATCAGTTGAGTGCTGAAGGTAAGGCACC ATATATTTCAGAGGTTGCACTCAAGCATCTATACACTGAAGAGAAGGTCACACCAGCTGAATTAGAAAGATACAGTATCGCACTTATTGATTGTTCCGAA ACAGAAAGCGATGAAGTGATAGAGTGTCGTTTCCAGTCCGATCAAGAGAAGCTCAATGCTGGTGAAAAGAAGAAGGACAAAGATAAGAAAGTTGACGAAA ATCCTCCAAGGGATTCTGAGGGACAAAGCAGCAGGCAAATAGTACCTGACAGAGACGTCAATGCGGGAACTGTGGGAACATTTTCAGTTCCTAGGCTCAA AAAGATAGCGGGGAAGTTGAACATTCCAAAAATTGGTGGAAAAGTAGTTCTCAACTTAGACCACCTGTTAGATTACAATCCACCACAAGATGACATCTCA AATACCATTGCAACACAAGCACAATTTGAAGCATGGTATAATGGTGTTAAACAAGCATATGAAGTTGATGATTCACAGATGGGCATCATACTAAATGGAT TAATGGTGTGGTGCATAGAGAACGGCACGTCAGGAGATTTGCAAGGTGAATGGACAATGATGGATGGCGAAGAGCAGGTAACATATCCGCTCAAACCAAT CCTAGATAATGCGAAGCCAACATTCCGCCAGATAATGTCCCATTTCTCACAAGTCGCAGAAGCTTACATAGAGAAAAGGAATGCGACAGAGAGGTATATG CCACGGTATGGCCTCCAGAGGAACTTAACTGACTACGGTTTGGCTAGATATGCCTTTGACTTCTACCGACTGACTTCTAAGACTCCTGTGCGTGCTCGAG AGGCACATATGCAAATGAAAGCAGCAGCAGTTAGAGGCAGGTCAAACCGATTATTTGGTCTTGATGGCAATGTTGGAACAGACGAGGAGAACACGGAAAG ACACACAGCAGGAGATGTTAACCGTGATATGCACACCATGCTTGGTGTTCGTATTTAGAGTATCCGTCTTTAAATTCTCTATAATATGGCGTTACATTAC TTAATACTATGTATTAGTGAGGTTTTACCTCCAGCATTTTAAATTCAGTATGTGTATCATTCTCTCTACTCTGACAAGGTAAGCAGTTAGTGAGGTTGCC TCGTGTGAGCTTGATCTTTGTAGAGCGAGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_19285; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_199480
| Blastp | Genome polyprotein from Potyvirus with 90.97% of identity |
|---|---|
| Blastx | Genome polyprotein from Potyvirus with 90.97% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003524885.1) |
| Pfam | Potyvirus P1 protease (PF01577.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |