| Id Trinity | FTRINITY_DN49978_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_199351 |
| Sequence | CTATTGATTTGACTATATTTTCTGTTTGTTTTTTCTCTTGTATTATTTTTATACTGATTTCATTCGATAGAGATGGAAATTTTAGGGAATGGAATGATAC TAGGTGCTATTGTTTATAATAGGATGAACAAAAATCATGTATGGACACAAACAATATGTTAGACATGTGTTGATTCAGGTCTTGCTCTGGAGTGAATTAG AAATGAACCCTGGTGGAATCGATTCCATCTAACACAGTTATTTTTCTAAACTCTAACTGTGTATTACATGGAATTAACTTATTGTTTACTCAATTCCACT CCATACCATCATAAATATTAAAAAAATTGAATATTATCTTTGTTCCGTTGGATTCCATCCATCATTAAATATCCGGACATAGCTTTTTTTGGTAAGATAG TGGCTTTAGCTTATGAAATTGTGTATTGACTTGAGGATTAGTTTGTAGTGATGTTCTTTTTCTTAAATAATATGGTAGATATTCCTTGAAACTCTGGCTA TGTTTGACATAGATAGTTTTCAAGGATGGATAAAAGAGGAAAGTTGTGTTAAGCGGTCGATATACATTGTTAAACTGTATCAAATCTTTATATAACATGA ACATACAATGTGGTTTGGTCAATTCTAGTGCTAGCATGGTTTTAAATTGCAGTTGTGATTATGTTGCATTTATCACATTTGCAGGAAACTGTAGTCAATG TAGATGCAATTATGTTCCCTATGTGACTGGAAACAGCAAAACCAAATATTGTGTCTGTAATTGCGGTTGTGGACCACAATTTATAACCTTTTCTTGGTTG TTACCTTTAAGTCAGTGCTGTACAGCTCAAGTCAATGTCAAATTTGCAGTGGCTGCAGTTTATGATGGGACATGGTGTTTGTTGTTATATTCCTTCTGAA CTAATGTATAACTTTTGTAAAATCTAGCTGGTGAAATGTGTTTACAGCTTTAGGTTAACTGAGGGGTTATATGATGTTTGTAGTGGGACATAGTATATGA GACCTGGGTGTTACTTTGCACTATTTGCTTATCCTTTGGATGCGAGACTAATATTTTTAGGCTACAGAGTTGTGTGTTTCTACTGACTCGAATCCCTAAT ATTGCGTAGTTCCCTCGACCAATTATCTTTCTATCCACTTGTCTGGTTATTGGGAATGGAAAGTTTACTGTTTCTGTGCATTAATTTTTTCTGCTTTAGG TAGAGATGGTTTGACACATAACATGTTGGATAATATACATGCTCATTGGAAGCGGCGGAGGGTGTGTAAGATAAAGTGCAAAGGAGTGTGTACTGTTGAC ATGGAGAATGTGTGCCAGCAGTTAGAGGTTGGTTTTTTATGCTTTTGACATCTGATCTAGTGATCTTTCATGATTTTCCCTAATATACTACTATAAATAT ACACACAGACACACATATAGGGAACAGTTCCCATTTTAAAAATGTGAGAACAGCAAGTCTAGGCTGTACAACCATACATGAATGATTCAGATTAAAAGTT GTTCAATGGACACATGACCAGTTCAAAAAAGTAACATGTCATGTTGGGTAATCTCCCAATCACACCTTTATATTTTGCTGCTGTTTGGAGCACTCCTTTG TTCATTATTGGTAATTGGTTGGCTTCTTGATCTAAAAGTCGTTACTTTGTTTCTTTTCTTACAATGGTTTACATTAACATACTTTCGTTTGTTGGATATG CTCCCCGTTATCTGGTTTTCCAGGAAAAGACAGGAGGGAAAGTCATTTTCCGGATGATGGGTGTGCTGTACCTTTTTAGAGGCAGAAACTACAACTATAG AACACGCCCATATTTTCCCCTGATGTTGTGGAAACCCATTCCTCCAGTATACCCTAAGCTGATTCGGCGAGTTCCAGAAAGTCTAACACTAGACGAAGCA ACTAAAATGCGTCAAAAGGGAAGGGACTTGATTCCTATATGCCAGATAGGAAAAAATGGTGTTTACTGTAACCTAGTAAAGAATGTCAGAGAGGCATTTG AAGAGTGTGAACTAGTGCGTATAAACTGTCAAGGACTAAATAAGAGTGACTATCGAAAGATTGGAGCAGAACTAAGGGATCTTGTTCCATGCACATTGCT TTCATTTGAAAATGAGCACATACTTATGTGGAGGGGACCAAATTGGAAGTCCTCTTTACCAGATGTCGGAGATGTCTCCAAGGGAGCCAGTGAAGTTGAT GTGAACAATGAAAACTACAAAACACTGCCATCAGACACCCAAGAACTCTCAGCACCACCAAACAGTTCGGTCGAGGCTGCAAATAATTTGTCACATGACA CTATCGTTTCCACCAGTTCAAGTGGTGTGACTTTGGATGAGGTTGAGTTACCATTTTTGACAGAAAATAGCAAGCAACCACTGTCTATTTTTACTGATTC TGCTTCACTTACGAGAATCTTTGAAGCTGAAACCACACGGGATGTCACAGACTTCTATGAAGCTGAAACCACAAACAATGCCACAGGCTCCTATGGTGAG CCTGAAGCTTGTGGGAGCACCAGTCCAAGCATGATCATATCAGACTATGATAGCTGTGCCGAATACCCCTCAGAAGCTTTGAGTGGTAGTCATGGAACCG AGGATAGAATGGATAACAAAAGCTCTAGTGATAGTTTTGTTGCTTCTGTTTCACGATCCAATGAGATGCAAGGTGCTGTTGACAATTATATCAATGGCAT GGAAGATCCCCATGCTGATAAGTTGCTTGATGATTCCGGGGTAGGAGATGTTAGTCTGTTATCAGCCTCACCTTGTACCGAAGAAATTTTATTACTGTTG GAGCAAGCTGTTGAGAAGGGCAGTGCTCTTGTTTTAGATGAAGTTCCTTTGGACGCTGACAAAATTTATCAAACCACAGTTTCCTTTTCTAAATCAGCCT CACCAGGACCTGTTTTTAGGACATACAGAAAAGTTGGGGATAAAAAAAGTAAGAAGCAAGAAGTTTCTACTTTGGAGACAAAAGAAAGTAACACTGTTGC CATCGAAGTTAATCCCATCAAAGCTAATACCATCAAAGTTAAAAGGGAGAAGAGTTCTAGAATTCCAAAAAGAGGAAATTTTGATCAATTTCTGAATGTT GTACCACAAGGAACATTAGGAGTAGATGAACTTGCAAATTTATTATCATGATTCTGGCTCATATTATGAAAACTACTGACAGTGTCATGCTTACTGTAAT TATTAACAATACAGTCATTTAGTTTTATTCTTCTCTGTCCTTTGCAAGTTTGCATTATTTTTGTTACATTGCAATGTTATTACTGTTATCTTAATATGGA TTAAATAGTCTGTGATTGCTTCTAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_19384; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_199351
| Blastp | CRS2-associated factor 1, chloroplastic from Zea with 39.46% of identity |
|---|---|
| Blastx | CRS2-associated factor 1, chloroplastic from Oryza sativa with 37.7% of identity |
| Eggnog | CRS2-associated factor(ENOG410XQZ0) |
| Kegg | Link to kegg annotations (542118) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429199.1) |
| Pfam | CRS1 / YhbY (CRM) domain (PF01985.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |