Id Trinity | FTRINITY_DN49987_c0_g1_i2 |
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Name Transcript | Ll_transcript_199264 |
Sequence | CTAACACGCAAGAAACATTAAAGCACAGTTCAGTTCTGCTTTGACCTTTTGAATTTGGTGACCCTTCTATATACAAACAAACCTCTGATTTTCTTTCATA CAATAACAAAAAGTCACTTTTTTTCTGTGCTTTGGACTCCAATTCTTCTTGCCTTTTCATGTTAATCCGTGTTGGGTTTTAGATGGATGATGAAGATGAA GGAAAACTATATGATCTTTCTCTCTCTTAATTAATAAAAGTGCAATTAGTTAAATTGTGATTATGGGAGATGAGAATGGTGTGAAGCCTATTCTACTCAA ATTTGGTTTGGCTTTGACTCTTTCATTTGCTGGGTTTATCTACTCTCGCCTCAAAACCCGAATAATCAAATCCTCTACTCCTAAAGGGTCTTCTTCAGAT CATGAGAGCGGAGTTAATCCGGGAGGAGGTATAAAGGCGGCGTTAAGTACTTGTAACACACTTTCGGAGGAAGAAACACACACGGACGGGGTTATATGTG ACAATTCTCATACCGGTATCTCTCGTAGCAGTAAACAGAGTGGAGAGACAGACGAGTTCCTCGTACCTGAATTTCATGATCTTGTGAAGGAATTAGACTT TGGCGAAGATGTAGAAGCACCTAGGCCAAAAGTAAGGCCTTCTATAGAATATGCAAGTCATGAGAAGGGGCAACTCGGGAACATTAGAATGCTTCAAGAT AGGGAACATAGTCTTGAGGTTCAACTGCTTGACTACGGTAGTCTCAAAGAGCAACAAGCAGCTATGATGGAACTCCAAAATAGATTGAAGTTAACTAATA TGGAAGCGAAGATGTTCAATCTTAAGGTCAAGACCTTACAGTCGGAGAATCGGAAGTTAGAGGAACAGGTGGCTGATAATCAAAAAGTGCTTGCGGAGCT TGAGGCCACAAAAGTGAATGTCAAAATGCTAAAGATGAAAATTAGGTATCAAGGTGAAAGGAATAAGGAGCAGCTAGTAGTTCTGCAAGAAAAAGTTGCA AAGTTGCAAGAACAAGAAAACAAAGATGCAGCTTGTGATCAAGATAATGAAATAAAGCTGCAAAAGCTAAAGGAACTTGAGTCAGAAGCAGAGGAGTTGA GGAAATCTAATTTGAGACTGCAGATGGAAAATTCTGACTTGGCTCGAAGATTGGATTCCACACACATTCTCGCAAATTCTGTTCCGGAACACCCGGAGGA AAATGCTCTAAAGGAAGAAAGCGAGTGTCTTAGAGAAGAGAATGAGAGTTTGATGAAGGAAATTGAGCAACTACAAGCCGATCGATGTTCAGATGTTGAG GAATTAGTGTACTTGCGGTGGATAAATGCTTGCTTACGATATGAACTACGCAACTATCACCCCCCACCCGGTAAAATAGTTGCAAGGGACTTGAGTAAAA GCTTAAGCCCTACATCTGAGAAGAAAGTCAAGCGGCTTATTCTCGAATATGCAAATGCTGATGATGGACCCAGGAACAATGTGGGCTTTGATTTAGACCT CTGGTCCTCCTCACAGGGTTCTATTCTCTCAGACTCTGGAGAAGAGTGTGATGGTTTTTCTTCTCTTGATAATTCATCACCAGCTAGAACTAACACTACA AGCAAGACCAAAATTTTTAGCAAGCTTAGGAAAATGATACAAGGCAAAGATGGTCATCATCGCCGACATAGTCAGGTTTCATTACAAGAAAAATCTGTAT TTCAAGAAGATATCCATTCTCCATACTTCTGGCCAAGTACATCAACCGGAAATGATACCGGAGCTGAGGGTCTCTGGAGCGAGTTTCCAACTCCTACTGC CACATCCAGAACTTCCTTTGATTCCTCCCGGTTAACTAGTTTGAAAGAAGGACATAGGAGAAATTCAGATAGCTTTGTCATGGGAAACTCATATAAATTC AATCAAAGGAAAATAGTATCTTTCTCAGGTTCCTCAGGCTTAGAGAAATCTGATTTGAAGAAATATGCAGAAGCTTTGAAAGATTCTAGTGCCAGTGCTA AACATCAAAGGCGTAGAAGATCAGCATCACATAGCTAGATCAAAATATCAAATACCAATACCGTATTATTAGCCTTTAGCATATGGAAACACCCTCTCCA CTTGCAGGGTAAGACTACATATATCTACCCGTCTCAGACCCCACTGATAGCCTCATGTATTACACCGTCCTTTATATACACATATATTATATAATTAGCA TTTAGCAGATTATACATAAGAATGGGTTTCAAATCAATTGGAAACTTTCATCAGTCTTTTTTTAGTTTAACATTATACCTCTCATTGCTTCTTTGCAAAT AATAATTTAGGATTAGTTGTATGAGTTGTTAAATGTAAATCAACCGGGAAAACAAGTTTTTGTCTCACTAGGTGTAGCTGACTATATAGATTGAATTATC GAAAGATGCAATAATGTTATAAGCAATTAAATATTTTTGTGTCACTTGCAATAAGACTAAAGATATCTCTATTATCATTATCTGAATTCAATGTTTAGG BLAST |
Tissue | flowers |
Gene name | LI_gene_19397; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_199264
Blastp | Protein CHUP1, chloroplastic from Arabidopsis with 36.29% of identity |
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Blastx | Protein CHUP1, chloroplastic from Arabidopsis with 37.38% of identity |
Eggnog | Chloroplast unusual positioning(ENOG4111F63) |
Kegg | Link to kegg annotations (AT3G25690) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436468.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |