Ll_transcript_274974

• Id Trinity: FTRINITY_DN50043_c0_g1_i2
• Name Transcript: Ll_transcript_274974
• Sequence: CTCACTCACTCACTCTCCTTTCTCTCTCTTAAGCGCATGCAATTGGGGTTGGTTTCTGTGTATTTTCTCGCCGGAAATGACGAACAGAGGCAAGGGCAAA GGCAAGGAGGTCGCCGGAAAAGGATCCTCCGGTAAGCGTAAGATTACCGCTGACAACGACAAGACCGGCGGTGGCAAAAGGAGGAACCGCGGCGTCGTTC AGTTTTTCGAAGAATCTGCTGACGTCGATGACTTTGAAGATAGCAGCGACGACAGTGATTTCAGCGATGATTATTTTGGAGATGAAGAGTTTGAGACATT GTCAACAATGAACAATGAACCAGCTAAGGGACAAAGTAGCAGCTTCCCATTTATCCCCAAAGAGGAAGAGATAGATGAAGAAGAATTTGACAGAATGATG GAAGCACGCTATGGAGAAGCTTCTACGTTTATTAGGTTTGCTGGAGATGATATAGATGACAAAGGAATTGATCCGAATTCCTTCGGCGGCAAGGAGTTTG TTCCAACCATCTGGAAAGTTAAATGCATGGTTGGACGCGAGAGGATTTCAGCTTTCTGTCTAATGCAGAAGTTTGCTGACTTAAAATTGCTTGGTACTAA GTTGGAGATAATATCTGCATTTGCTGTAGATCATATGAAAGGATTTGTGTACATTGAAGCTGAAAGGCAATGCGATATTAATCAGGCATGTAATGGGATT ACTGGTATCTATGTTACTCGCGTGCAACCAGTTCCAAGAAATGAAGTTTTCCATCTATTTTCTGTTCGACCTAGAAGCAATGAAATTGCCGTGGGTACGT GGGCTCGTGTAAAAAGTGGTCATTACAAGGGGGACATAGCACAGGTTGTGGCTGTGAATAATACCATCAAAAAAGTTACAGTGAAGCTTATTCCAAGAAT TGATCTACAAGCATTGGCTGCCAAATTTGGTGGTGGATACAGTCGCCAGAAAACAGCTGCTGTGCCAGCACCAAGATTAATCAGCTCAAGTGAACTTGAG GAGTTTCGACCTCTCATACAAATCAGACGTGACCGTGATACTGGCAAGGTTTTTGAAGTTCTTGATGGTATGCTGCTTAAGGATGGATATGTATACAAGA AAGTATCTCCTGATTCATTAAATTTATGGGGTGTTGAGCCAACAGAAGAGGAACTGTTGAAGTTTGTGCCTTCTGAAAACAATGAATCAAAAGATTTGGA TTGGCTCTCTCAGCTTTATGGAGACTCAAAGAAAAAACGGGTCATAAGAGATGATAAGGGAGGTGGGAAAGGAGAGAGCTCATCAGGTTCTGCCGCGGCA AATGGTTTTGAACTGTATGATCTTGTGTGTTTTGGCAAGAAGGATTTTGGTTTAATTGTAGGCATGGATAAAGATGATGGCTACAAGATTCTTAAAGAGG GTCCAGATGGACCTTTAAGTGTGAATGTTCAGCGACGCGATATAAAGTGTGGTTTAGTTGATTTGAAACTTAGTGCCCAAGATCAGCACAATAAAACTAT ATTGGTGAATGATAGTGTCAGGGTTCTGGAGGGGCCATCCAAGGACAAAGAAGGAATTGTTAGGCATATCTATAGAGGGATTATCTTTGTATACAATGAA AGTGAGGAAGATAATGGTGGTTACTTCACCTCTAAATCTAAAATGTGTGAGAAAGTCAAGCTTACTGTTGGTGATTTCAGTGGAAAGGATAGTGAACCAG GCCCTTTAGTCTTCGAAGACATGCCAACATCACCAAGATCCCCTCTGTCACCAAAGAAACCATGGCAAGCTAGAGAAAACAATCGTGAATTTAACCGTGG GGACCAAGATGGCTTGTTTACTATTGGTCAAACCTTGAGAATTAGGATAGGTCCTTTGAAGGGATACCTCTGTCGTGTCATTGCCTTACGCCGTACTGAT GTTACTGTGAAACTAGACTCTCAGCAGAAGGTTCTTACAGTTAAATGTGAACATCTTTCTGAAGTTCAAGGGAAGGGTACTGCTGTGTCAACAAGGGGTG ATCCAGATCCAAGCTCGTCAAAGCCATTTGATCTACTGGGTACTGATGGCAACTCTGGAGGTTGGATGGATGGAGCGGGAACATCCACTGGTGGTGGTGG ATGGAATGCTGGAGGAACGTCCACTGGGGGTGGTGGATGGAATGCTGGAGGAACGTCCACTGGTGGTGGTGGATGGAATGCTGCAGGAACGTCAACTGAA GGGAGTACATGGTCTAACCATTCTGCGCCAAGCACCTTGGAGACTGTAAATCCCATCAGTTCCACGGGCGTAGAAGACCCTGCTTGGGAAACTAAAAAAA CTTCAAACACGAGCTTGACATGGGGTGCTGTAGCGGGGAACAAAGCTGCTGATGATTTGGATGGAAACCAACCCTCTGGATGGGACAGTAAAAGCAATTG GAATACACCCAAAGCTTCTGAAGATGAGTCATCTGGTTGGAATCAGAAGTCTGATGAACATAAAAAAGATGTTGAACAAAATGGCCAAGGCAATGGTTGG AAAAGTGGATCAAGTGGTGGTGGAAGTAATTGGAATGCTCCTGTATCTTCTTCCCAAGTGAACTCTGAATGGAGTAAGAAGTCCACTGAAGATGATAAAG AGGAAAAAGGTAAAGACCAAGGTGGTTGGAGTGCAGGAAAAGCTTCAGATGGAGTAAACACAGATTCTGCCTGGGAAACTAAAAAATCTAGTTCAAGTTG TTCTGGTTGGAAAAGTGGATCAAGTGATGGAGCTAAAGAAGGTTCCAATTGGGGCAACATGAAATCTGGTTCTGTAGCTGAAAACCAGAACTCTGATTGG GAAAAAGCAAGTAATTCAAATTCTGTATCTGGTGATGCTGGGATACTTGGAAAAGGGCCTGTTGAAGATTCATCGAAAGACAGTTGGAAGAGTGGTTCTG CTGATGGAATTAAACAAACATCAAACTGGGGTGCTTTGAAATCAGGATCAAGTAGTGAAAATGAGAAACAGAAACCAAACTGGAGTTCTGAATTGAATCA AACTTCCAGCTGGGGTAAGAATAACAATTCCTCTAGTGGTGCTGCTGCCAATGAAAACAATATTTCCAACTGGAGTGCTGCGAATACTGGTGCTGGAAAC CAAGATTCCTCTTGGGGAAAGAAAAACCAGGATTCTGATCAGAACAATAGTAATTGGAATTCTGGATCTGCCAGTAATTCGAATCAAAATTCAAATTGGG GAAAGAAAGAAAACTTATCTGAGAGTGCTGGGAATGACAACAATTCCAACTGGAGTTCTGGGTGTACTGATACTGGTAACCAAGATTCTGGCTGGGGCAA AAAAAGCAATTGGAACTCTGGAAACAGTGGAAGCCAAGCTTCTGATCTGAAAAATAGCAAGTGGAATTCTGGATCTGATGGTTCTAATGAAAATTCCAAC TTGGGAAAGAGTTCCACCTGGAGTTCTGGAAATCAAGATTCCAGTTGGGGGAAGAAAAGTACATGGAATTCTGGATCTGATGATACAAATCTAAATGACT CTTCAGAGGATGGAGCAGGTGGTGGGAACTGGAGAGGTGGCTTTAGAGGTAGAGGTTTTCGGGGTAGAGGAGACCGTGGAGGCTTTGGTGACCGAGGAGA CCGTGGAGGCTTTGGTGGTCGAGGAGAACGTGGAGGCTTTGGTGGCCGAGGAGAACGTGGAGGCTTTGG
• Tissue: flowers
• Gene name: LI_gene_19490;
• Additional information: details;

Expression of Ll_transcript_274974

FPKM

• FPAB: 10
• FPNAB: 15.7
• LF1: 16.8
• LF2: 14.8
• LF3: 17.6
• LF4: 6.8
• UF1: 7.3
• UF2: 15.2
• UF3: 12.8
• UF4: 6.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_274974

• Blastp: Protein RNA-directed DNA methylation 3 from Arabidopsis with 42.11% of identity
• Blastx: Protein RNA-directed DNA methylation 3 from Arabidopsis with 52.85% of identity
• Eggnog: Transcription elongation factor(COG5164)
• Kegg: Link to kegg annotations (AT5G04290)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441366.1)
• Pfam: Early transcription elongation factor of RNA pol II, NGN section (PF03439.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;