| Id Trinity | FTRINITY_DN50088_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_275243 |
| Sequence | AAAATAAAAAGAGGGAAGGTGAGAAAATAAAGCAGTGTGAAACCCTAGTAAGTTAATTGAATCGTGAAGTGAGTTGTGAATGGAACTAACATGGTTGAGT TTCATTCTTGTTGGGGCTTTCGGTTACTTCATCGGTTCTCATTATCCTTCTCGCTTTCTCCTTTCCTCACTTCGCTCTCTTCCTAAAGACAACAACTTCA ATAACAAGAACAATTCTAAATCCAAATTCAAAGACCCTCTTCCCATTGAACAACTCGCTCAAATTCTTGATGATTTTAAAATGATATTGGTTGTCAGGAA TGATCTTAAGATGGGTAAAGGAAAGATTGCTGCTCAATGCAGTCATGCAACTTTGGGTCTCTATAAAAAGCTCCACAATCGAGCACCAAAGGCTTTGCAT AGGTGGGAGATGTGTGCACAGCCAAAGGTTGTTGTCAAAATTGAATCTGAAGAAGATATGCTGGCTTTGCAAGTAAGTATTGTTTAGGGAAACATGGCGC TGATTTTGCTAAATTTTTGTTTAATATGTTTAAGTGCTGGATTAGATAACCAAGTTTGGTCCAAGGAGAAAGATATGAAATCACTTATCTTTTATGTTAA TCATATAAATATTGGTTGGAAGTTAAGTTTTTATTAGTGTTCTGGTCAACTTTTGTATTTCAAAGCAAAAAGTGCAAGATAGGATCTGCGATCAGGAGTA AAATGGATATATATATATATATAGACACACACACATGTTACTTTTGATTCAACAGATAAGTACAAATAGAAAGAAAGTAGATTTGGGGTCAGCTATGTTG TGTATAGGAACTGCCTAAGGCTTGTTTGTACACTCAATGCCAATGGACATAAAAGTGGGCTATTAGAGAAAATGTCCGTGCTCATAATACAAAGTTAGGC AGGAAAATTTGGGTTTTACTGAAGTGTAAAATACCTTCTGCATGCCTGAAATTTAGAAAATGAGTTTCTATTCTTACTGTCACCTGAAAATGTATAGGCT TTTAAGATTTTTTAAATGAGAGCTCTTGCATAGTGGTGTGTAATTTGGGTTATACATGATTAGTCATTAGTGTGCATGGAGAGGAAGTGGAGGGAATTCA GGAAAGAAAAAATATTTGTTACCCCAAATCACTATAATATATAAATAGGTCCTGTAAATTTGTTAGGGTTAAAAGCTTATTTGAGGGCATTATATGATTT GTTTTTAGTCTGGAAACATGTCTTGAAAAACACAAATGAAGTTGTTTTGACTTTGGAGCTGTGAAAAAAGTAGAAGTGAGAGGCTTGGGAATTTGGGTTA TAAACAACGAATGGCCAAGGACAGAGGATGTGTGCATAGCATAAAATTGTCAGCCAAAATGTTGATCTGTTCATGTTGGAACTTTGAACTCAAGTAAACG AAGGCAGTTACTTTGGCTAATCTTTTTTTATAAGTTTTAATAATATTTTAAGGATGTATGGTATTAAGTTAACTCTTTCATTTTAGCAAAAAGTAATAGC ATGGAAGGTTTATTATGTGACAAGCAAACATATTCCTAGAATATTAAGTAGTTTAAACTATTTTTATTTTGTCTACTTGGTTTATATACACTAATTTGAT ATATTGTTTGGTATATCTTTGTCTATGAATAAATTTGTCTACTTTGTCTTGTTATCTTCTTTCATCCTTCACATCAATGTTAACAAATTTATATTCACCT TGCTCTGAAATGCCTAATACTACATGTTTATCACCCATTTTACGATATCAAATTCTCTAATGTTAATGTATAGTAACTCTCTCAGAAGTTGGTTTTGTTT TAGATATATTGTTATTTAATGTGTCAGGAAAGGGCTAAATCTCTGAAGTTACCCACCCATATCACCATTGATGCTGGGAGAACGCAGATTGCTCCAAATT CCAGAACAGTGATGGCAATTATGGGACCTGTTGAAGTGGTAAATGATGTAACAGGTGGACTAAAACTACTATAGTTTTCTGTCCAACCAAGATGTGCTAT TGTTTACTATGAACCTGAATATTCATGAAGGATGACATTGACAGATTGAAGTGTTGAACATTACTACATTAGAGGCCTCCTCAGGCCAAAATCCCCAATG TTCTTTCTGCATAATGTTTTGCAATTAATCTTATGTTGACATTTGACAGTAATAATGATGATGATGATGATGTCTTTTCTTTGAAGATCCTAGCTGATAA AAGGGTAGAATCACGTGGACTAAATAGTTTATACATAACTTTGCAATTCAGTTAATATGAAGTGTTATGGAGATGTATGAATTTTTTTGCCCATTAATAA TAAAAATTGGACATCAACAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_19559; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_275243
| Blastp | Peptidyl-tRNA hydrolase 2, mitochondrial from Homo with 50% of identity |
|---|---|
| Blastx | Peptidyl-tRNA hydrolase 2, mitochondrial from Homo with 61.04% of identity |
| Eggnog | The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity)(COG1990) |
| Kegg | Link to kegg annotations (51651) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413692.1) |
| Pfam | Peptidyl-tRNA hydrolase PTH2 (PF01981.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |