| Id Trinity | FTRINITY_DN50091_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_275007 |
| Sequence | ATTTATCTTCACACCAACACTCAACAATTATGCTAGTGGAGTTTCTACCTGTAGAAACTTTGCAATTTATAACACATTTTAATTAATCATGAACTATGCA GAAAAGTAATTGAAATAAATGATGAATTATACAATACCGTAAAGTAAAGTGTTAAACCCATGCTTCTGAGCCCAGTAACAAAGCCATAGCCCAAGTGAGA AATGTGAAAATGAGAAAAACAAAACAACATTTGTTCAACAAATTCATCTCAAAATCGATCCACAAACTGAACATGTCGTGTTTCTTATCTTGCTGCGCAT CTTTAACATGCGGTCTCTGCACTTCTGTAGCATCTGGGATCTCCCAAAAATCTGCGAGGATTGGTTACTGTGCTCTCTTTGGAGCCTCTCTAATCCTTTC TTGGCTTCTTAGAGAAGTTGGAGCACCCCTTTTGGACAAAATCCCATGTAACCTTCAATTTTTACACTAAAGTTTCAAACTTTGTTATAATTTTCCATTT GGGTATACATAATTTTGTTGCTACTTGTAGGGATTGATTCTTCCCATACCCACACAAAGGAATGGTATCAAGTGCAAGCAGTTCTTCGTGTGAGCTTAGG GAATTTCTTGTTTTTTGGTATTTTAGCTCTTATAATGATTGGTGTTAAGGATCAGAATGATAGGCGTGATTCATGGCACCATGGTGGTTGGACTGTGAAA TTGATCATGTGGCTTTTGCTTGTAATTCTTGCTTTTTTCATTCCAGATGTTGTTATGATAGGTTATGGATTCATATCAAAATTTGGAGCTGGATTGTTTT TATTGATTCAAGTGATAATTTTACTTGATTGCACACACAATTGGAATGATGCATGGGTTGAGAAAGATGAACGGAAATGGTATGCTTATAAAAATATTTT ATATAATTTTTACCAATGGATTTGTAGTTGCCGTTGCAGGCCTATCGTATATAATGAATCTGCGTGTTTAGGTATATTGCTTTACTTGTTGTATCTATCG GATGCTACATTGGAGCGTATGCATTGTCTGGAATACTTTTCATTTGGTTCAACCCTTCGGGATATGATTGTGGCCTCAATGTCTTCTTCCTTGTCACGAC CATGATTCTTGCATTTCTATTTGGTGTTATTTCTTTACATCCTCAGGTAAAGAATATAATCCCTTTTAAACAATTGAGGTTCGATTATGTTCTGTGCTTT TGTGCGATATGAATTGATAGGTGATGGGAGAAAATCTTAAGGCTTTCCAAAAGTATAATTTTTCTTGTATGCCTAATAGTCATAGAAGGCTAAAATCATG TAGTCACTTTGTGATGCTCTTGGAATAACTAGATGTTCGTAGAAGATAAACCTATTAAGTTATTCTCGGATATCATTCTCTATGCAAAGCAAAAGACATA CAAGGATGTTTTTGGCGTTCTGCCAGTTTGCTGGTAATCCTTTTCTCAAGCTTAAGTTGGCTGTGGAACACATATTTTTATTTACTAGTTCGGTAAAATG GTTAATTTTCTGAAAGCTTTATTGAATTGGGTAAAAGCTGTGAATCTGCAACTTAATGTTGATGATGATATGTCCGTCATGAAAGTAATGCCATCTGAGA GAGAATTCTTTTAGTGAATGCCATGTTACCAAGTAGTACTTGGTAATAGCTTGCCAGTTGCCAACATCTTACCTCACCAATTCGAGGGAAACAATTGTCT CGGCATCAATTTACCCCTTCTGCGCATCCCCTTCCCTGTTCACAATTTTATTTGGTTCCTAGGGAATTATATTTTATAGTGTGCGAGTGAAAATTTAGTA CCGTAGTACTCAGTTTCCATCCATGTAACTTCATGCGCTCATTCTTATTATTGTTAGAAAAATAATGGGAATGTAAAAACAGGTGAATGGAAGCTTGTTG CCTGCATCTGTGATTTCCATTTACTGTGCTTATTTGTGCTACACGGGCCTTCAAAGCGAACCTCGTGAGTATGAGTGCAATGGTCTCAACAAGTCCAGAG CTGTCAACACAGGCACACTTGTTCTCGGCATGATAACAACAGTTCTATCAGTGTTGTATTCAGCTCTTCGGGCCGGATCTTCAACCACATTCTTAACACC ACCATCTTCGCCTAGATCAGGTAATAAAATATGCTTAAAGTCCTTTTTGATCCGGTATCTTGATTTGGTATTTTGGATTAAACTCTTTTACTCCTCTTTG GATATTCAATTACAGTCTTCTTTGTTTTATAAAAAAATGAAAGGGATTCCGACAATCTTAGATTTAGTAAATCAAATACTGACCCTGACCAACTTTAGAA ACTTGCCTTTTGATTTAAGAGAATGGACACATTTGGTTTGCGAAAAAATAAGGAGCTATTTGGTTTGCGAAAACTGTTTCTTTTTCGTTTTCTACTTTCA TCGATAATTGCAAAAATGTTAACTTGTTTTCATTCTATTTCGATATTTCCTATTTTCAAATTTCAAATATTTGTATAGAAAATGTATGAGAACTTCTTTT TACTTATTCCTGTACAAATCTTTGAACACAGGAAATAGAATGAAAACAAGGTGACCTTTTTGTAAATATTAACAGTAGCAGAAAATGAAACAGAATTTCT TTTCACAAACCGAACAGACCCTAAGCTTCATTCTTCGCCTTGTTAGGATCTCTTTTTCTAGTTATCATGTCGCTTTTCACACCTTATGTTTTTCAGGTGA GAATAAACCTCTTCTTGAGGAAGAAATGGAAGAAGGAAAGACAAAGAAAGAGGAAAAGGAAGCAAAACCAGTTAGTTATTCATACTCATTCTTCCACCTA ATATTTGCCCTGGCTACCATGTATTCAGCTATGCTTCTTTCCGGGTGGACCAGCTCAAATGAAGGCACAGACCTTATAGATGTCGGGTGGACATCGGTGT GGGTTCGGATTGGCACCGAGTGGGTCACTGCTGGGTTGTATATCTGGACTCTTGTGGCTCCTTCCCTGTTTCCGGACCGCGAGTTTGCTTAGTTCCCTCT CTTGTATATAAATTATTACTGTAATTGTTGCCATTGGATATATGTTATTGTAAGTTATGGCCTTCCTTCCATGTCTGCAAATAGAATGTCAGTGTTGCAA GAAAATGATGTATGTATAGATTCACCTATGTAAAATGGCATGCACTCTTACATCTATTATTGTATATAGTCTTCCATGTTTGCTTCATTTGAGATACAAA TGAATGTCGGATAATATACGGACCGTGTAGATTTTACACTATGCAGTGACACTGTAAAAGTTTTTTATATTGTCGTGCATCATCCATTATTTATATTTAA TTGCCGAGAGTTGAGATGTTTTATTACCTTGAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_19566; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_275007
| Blastp | Serine incorporator 2 from Bos with 40.48% of identity |
|---|---|
| Blastx | Serine incorporator 3 from Pongo with 35.78% of identity |
| Eggnog | serine incorporator(ENOG410XP7K) |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002349) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426195.1) |
| Pfam | Serine incorporator (Serinc) (PF03348.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |