Ll_transcript_3470

Id TrinityFTRINITY_DN50191_c0_g1_i1
Name TranscriptLl_transcript_3470
SequenceAAAAAATGGAAGGATGAAGAAGGTAACCTTCATGCTACTCTCTCTGTCTCTCTCTTTATTTGTATTGTATTTTTGTTATGCAATGTAATTGAGGAAATGC TTAGCTGTGTCTGTGTTTGGGTTTTGCTGCCAAATTCGAATTATTTCAATATTGTATTTCGAAACCCCACTGAGGACCTTGTAAGCTACGCAACTAACTT GTTTGAATTAAAAATAAGCTACCTATTGCTTTTTGTATAAGGGCTTATTTCAATAAGCTGTAAGCTACATGAGGTAGCTCATGACTTATAGGATAGGGGC TTATGTCATTTACACCTATCAGTTGGCTTTTCAGCCAATCATGCTAAACAGTTTTGATTCAACCAACTAGGTTATACCTACCTTCTAAGGTTTCAGGTAG GTTATAAAGCTTCCAGCTAGCTTATAAAGCTTTCAGATAGCTCAATAGTTTCCAGCAAACATGTATGCTTTCAACTACCTTATCAGCTAGTTGTGACAAT GGCAAACAGAACTGTTGTAATCAATTGTATATTGTATTCGAGTCAATTTTATGGTTAAATGGATTCTTTGAAAAGGGAATTTAAGTTAATCTATTTCATT TGTATTGTGTAAAAAATTCACTTTTATATACAAAGTCAGGTAGCTATGGGAAAATTTCACACAAGAGTCCAGTAAATAATTGAACAGAGAGAAGTTATGG GATAATAATTGAGTGGGTTGAAAATAAGCTATATTTGAAATCATAATGATGAAGCTTTGAGATGGAGAAGAAATAGTTTTTTAGTTTTTACCTCAAGAGT TTTTTTGCTGCCAAATTCACTAGTTTAATTATTAAACAATCCCCCCTCTTTCAAAACATCTAAAATCCATAGTAGACTAGTTATCCCAAACAAACACTCA GTGGTAAATGTGATTTTGAAGAGAGCACTAGATTATAGGATCACTGTTTTCCTTTTTATTTGTGAACATGTGATCTCACATGTCTGTGGCATGAAAGTGC TACATTTGTATGAATTTTGTTCAAGTTTATTTCGTTGTAGTTTGTTTTAAGGTCTTTATTTTTATAAAGTATATGAAGTATGAACATTTCCTTTTGAATT GTTGCAGGGCCTGGCGAAAGTTATTAGGTTTCACCCAAAGGTCCCAGGAGTTTGGATTTATGCTGCAGCTTGGGAATTTGATCACAACTTAAATGTTACA GCTGCTCGTGCTTTAATGCAGGAAGGTCTCAGGGTTTGCCCAACTTCTGAAGAGCTTTGGGTAGAGTACCTTCGGATGGAACTTACATACATTAACAAGT TAAAGGCCCGGAAGGTTGCCTTAGGTGAGGATGAGGGAACTCTGACCCGCGATCCTAAAACTGCGGTTGAAAAACAGTGGAGAGATGAAAACAAAGAGTT ATTTAGGCCCCTCGGTGAAAAAGCCAGTAATGATGGACCCGATGTTGAAAGTGAAGAACCAAACAAGAAAAAGGAATTGTTTGAAGAGCATGGTATGAAC ATTTTTCGAACTGTCTATGGTGCAGCTGTTGAAGCAATTCCTTTGAGTCTTAGTCTTAGGAAGTGTTTTTTTGAAATATTGGAGGGTACCAACTTAGCAC ATTTTGAAGATGTGCGTAAGGAGATATTGGGTGACATGAAGAGGGATTTTTCAACAGAACCAGAATTTTGGGACTGGCTAGCAAGACACGAATGTGATCT TGAAAATGTGCCGGTGGACATAAGTGAGGAAGTCATAACTTCCAAGGTGGATAAGGCAATTCAGGTCTATGAGGAGGCTTTGAAAAATATGTCTTCGGGA ACTATATTTAGTTTATATTCAAATTTTCTATTGGGTATTGTGGCTCATAAAGAAGGAGAAATCAATATATCTGGGTTATCAGGTCACAATGAAAACTATA TATCACATCTCCTCAAAATATATGAAAGGGCTGAAAGTTTGGGTTGCATTACTGAAGATCTTGCTTGCAAACATGTGTCTTTACATTTACAACTGCAGCA ATTTGATGAGGGCAGGAAACTAGCAGCAAAGCTTTGCAGTGGAAAGCTTGCCGAATCAGCACAGTTATGGGAATTAAGGATCACTATAGAAATTAGATGT ATCACAGGGAATTCTCCTTCGCCAAGTGATGCTGATCTGCAATCCCTTTTTGAACTCCTTAGACAAATTTTGACAAAAGTGCCTGTTTCAAAATCAGAGA ACTTGTGGGTAAAGGCCTTTAAATTTTACACAAATCAAAGACAGTACTTTGATAAACTGGTGGAAATTTCTGTAAGTTCTTTGACCAGAGATGGTGGAAG TGAAAGTGCATTTTCCCTCTCCTCTACAATTGTAAGTTTTATTCTTCAAAAGGATGGAATTCAGCAGGCCAGAGAAATGTATAAACGATATCTAGCTTTA CCACATCCTGGCCTTGCTCTATATAGAGGCTGCATTGGCCTAGAAACAAATGTTGCCTCAGTCGGAGATAAAAGTGGTCTCATTAACGCTAGGAAATTAT ATGAATCTGCACTTGCAACTTATGATCAAAATGTAAGCCTGTGGCAAGATTATTATCGATTGGAGACCAAGATGGGAACATCAGAAAAGGCTACTGCTGT TTATTGGCGAGCAAGGAGAATTCTCAAAGATGCCACTGAATTTGTTGCTTCCTCAAACTTGTGATTATTTCTAAAGTAAGGTCATGGCTTTGGAGTTCAA TTTTGACCACATTTAAATTTAAGGTTTCCTTCTCCGTGAGAGGGTGACAATGATGGATTTACCTCCCTTTTCCCTAAGGTGATAGTAACTGTAATACAAC CCTTGTATCCGACCCTTTTCATGCAGTGAAATTCTAATATACTCAGCAATTTCATAACTGTTGAGAATCGATTTTGAAGGATTTTTATTTCATTGGATCG ACATGCAGTGCAGTGTAGTAGAACTTCTGAATTTGATTTCGTTGTTACCACGTGTGAACATCATCTATTGCAGTAGGAATATTGATCGATCAAGTGGGTT GTATAAGACCATGTCCCAGAAGTGCTATACTAATAAGCAAAATTTTAGAGAGTAAAATGAATCACT BLAST
Tissueflowers
Gene nameLI_gene_19727; 
Additional informationdetails; 

Expression of Ll_transcript_3470

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_3470
BlastpU3 small nucleolar RNA-associated protein 6 homolog from Mus with 23.6% of identity
BlastxU3 small nucleolar RNA-associated protein 6 homolog from Mus with 24.34% of identity
EggnogUTP6, small subunit (SSU) processome component, homolog (yeast)(COG5191)
KeggLink to kegg annotations (216987)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019464069.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;