| Id Trinity | FTRINITY_DN50266_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_240332 |
| Sequence | CATTATCTGCATTGAAATGGCATCAACAACATCATGGGCAGGACTATGGTTTCTCACTAGAAACACCACTTTTTCAACTACAAACACAAACACAAGCCTT GAGTTCTCAGTTCTAAAACCAAATGCTGGATCTTTTCGATTATTCTCACCTTATTCTTTGTTTCATAATGGCTCAACATCACTCACTCAACGCTCATGCA AGTGTTCCTATTCTGCTCCTGTTTCCACTAGAACCTATGAGTTTTCTGATACATCTTCAGAAGTGGAGCTGAGATTAAATTTAAAAGGACTGGATATTAA AAGTTCAAAAGAGATATTGGTTGATACAAGTGATTCCTCTTTAGCTATCAGAGCATTGCGGCCAGGACTTCCTGTCACACTTATAGAAACCAATCGTCTT TTTGACAGAATTAAACCCTCCGAAACGATATGGTATATAGATGACGATGAACTGGTTGTGAACTTCAAGAAACAGGACCCTGATTTGAAATGGCCTGATA TAATGGAATCATGGGAATCACTTACAGCAGGATCTGCACAACTTTTGAAGGGAGCATCAATCTACCTTGTTGGCAATTCAACCGAAATCAACTACAAAGT GGCTCAAGAGATAGCAACTGGTCTTGGGTACTATTAAGTCCAATTCTGATTCTTATTGAGTTATTGTCAATATCAATATACTTACTGTGCATTAACATAT AAACCGTATTCCGAATTTGACATATATATCAGTTATGGCAGTTATGAGGTTTTTCCCACAGAAGAAAGATCTTATTCATGTTGCATACTTGGCTATAGCT ATAATCAAATGCTAGTAGTTTCTAACAGCTTTTATGAAGGCATAATTATATCAACAGATGCACTTCTATTATAGATGCCTATGGTTGATGTGCAACTTTC ATAAATGGCTTATAAATTTTAGTGTTTGATATTCTTATCAGGTACACACCACTTAGTACAAAAGAGTTGCTGGAAACTTATTCCAACCAAACCGTGGATT CCTGTAAGTGTCAATGTGTCATTTTCTATGCCTTGCTTCACATCGTCAATGTTTTCTCTTTCTCCTCCTGCAGTTCAGGTTTCTGGTAAATATATAATAC AAACATCGAATTACTATATGCCTACGCTATTTAATATGTATCATCATCAACTTCAGCATCTTTAATGATTAAAACTACTACCAGAACTCTAGGATCAATC TTGGGAGTGAGTATATAAAGTCTTACATGATAATATGACATTGATGTTAAGTGCTCCCAAATTTTTATGGCATAAAACTAAAGGAGTGTGCAGATTCTGC TTTTCAGCATATGAATATCCAGCATCTCATGAAAGCTACTGAGTTCTGATATTTCCATTGTAGTGCCTATTGTTTAATACTTTTCTTATGAAGATCCCTT TCACAAAGGGTGAAAAGTGAAAACTGAGTCTACTTTTTATAATCATGTCTGAAAAAATTGTATTTGTTTAAAGTATCAGTTGTGATGAAACACATTTGTC GTATATATAAATTCATTATGTCCTTGCACAGTTGCACTAATGCGATGCATCTTACTCAATAGAAGATACTGCTTAAATAAATATATACATCTAAGTACTT TCATATTTTGCAGTGCATTAACAAGTGTAATGAATTCCAGGGCTGCTTGCTGAAGGTTCTGATTCAGTTGCAGAAGCAGAAAGCGCAATTCTTGAAAGCA TAAGTAGTCATGTTAGGGCTGCAGTTGCAACGTTAGGAGGGCAACACGGTGCTTCTGGCAGACCTGATAAATGGCGGCATCTTTATGCAGGATTTACTGT CTGGTTGTCACAGACTGAAGCCACAGATGAAGATTCTGCAAAGGAGGAGACCCGTAAGAACGTCAAGGATGGCAGGCTTGCATACACAAATGCTGATGTG GTTGTTAAGCTACAGGGCTGGGACTCTGCTTATGCCAAGAATGTGGCACAAGCATGCTTGAGTGCCTTAAAACAGTTAATCTTGTCAGACAAGAAACTTC CAGGTAAAAAAAGCCTCTACATAAGATTGGGATGTCGTGGTGATTGGCCAAATATCAAACCCCCTGGTTGGGATCCATCAAGTGAAGGTGACAGAAGTCT TGGTACACAATAGTGTAACATGAAATTCGGTTAGCCACAAAGTTTGTGTATACAAAGTTCATGTATTACCACAAAAATATAAGAGACAGCTTCTGTGGTT CAAGTCGTTATTAAGCTATATAATATTAGTTTTGATTGCCACATGATGGAAGGTGCAACATGATTAAGGGCTCCCACTAAATCACAAGTATCTACTAACA GAGAATTTGTAGAAGAAAATGTTGAAAGAGTATGTTCTTAGCGTTGCTCAAATGTGTATACTTTGGTACTCTTGTGTTATTAAGAAATTCCAAGTAAAGG CTAAGAATCGTATTCCTATTATTAGCATTTTTGCTTAAAACTTCTGATCAGCATTTATAACTGTAGTACATGAGCTGCAATACTTAGTCGTTGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_19847; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_240332
| Blastp | Probable inactive shikimate kinase like 2, chloroplastic from Arabidopsis with 57.06% of identity |
|---|---|
| Blastx | Probable inactive shikimate kinase like 2, chloroplastic from Arabidopsis with 77.03% of identity |
| Eggnog | Shikimate kinase(ENOG410XSXA) |
| Kegg | Link to kegg annotations (AT2G35500) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450710.1) |
| Pfam | CS domain (PF04969.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |