| Id Trinity | FTRINITY_DN50287_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_240512 |
| Sequence | ATTTTGTATATAAAGAAAAAATCGATTTTGGCGAAAGCAAGAGCATCCTCAACACAACACTGCTTTCCCTGAAGCGCCGTTTGCTTTGCACTACTTGTTC TTTTTATTCTCCATTTCTACACTTCCTTTTTCTCCTTTTTATTTTATTTTGAAGGTATCCTTTTCTTTTTGTTTCTTTCAATTCTTAATTTGCAACCAAT CCCATTTCCCATTTCCACACCCCTTTTCGTCATTATATGATGTTGTTGTTTAGGTTTATGAGTACTTACTTCTATGTGTTTGATAAAATGTCTGACTTAG GTTTTTGCTGGGAATGTGTTTTTTTTAGTTTATATTCTGTGTTTTTTGGGTATGATTTATGAACCTAACCATTCACTTTTCTGTTATTCATTTGGTTTAA AGCTACAATCTTGTGCATAAGGGTCGTTGAATAGTGTATTTGAATCTGGAACACGGTTTTTAGTTTTACTCGGTAGAGCAATGACAGATTTTTTGTGCAT TCTGAGAGTATTATACCCCATGGATCAAAAAAAATATATAACACTTGAATTGTGAAATAGTTTTAGAAGTACTGAACCTGTAGTGAAAACTTTAATTTTT TTCAGTTTGGTGTCCCTTAAATTTTGGGGTTTTCGTATTGATCTTATTGATATAATTTTCACCTTTAATTTGGGAATTGGATCTTTGCTTTTGTTTTGTC CATGAATGATGAAAATGTAATTGCAGAGTATAAAGAACTAGAAAAGAATATGAATAAGGATAAAATCTTCAAGCTTGCAAAGGGCTTCAGGGGGAGAGCT AAGAACTGCATAAGGATAGCAAGGGAGAGGGTGGAGAAGGCCTTGCAATATTCCTACAGAGACCGTCGTAACAAAAAACGTGACATGCGATCCCTTTGGA TACAACGGATCAATGCTGGAACCCGCCTTCATGGTGTATGTCTTCTATTCTAGTTGTTCTCTTTCCAAGTAATAATATGGGGTTGATTTGTTGTGTAGAA TTCAATACTTGAACAGGGAATGCAATATTGCTTCTAATATTTTCATCAAACTTCAATTTTTTATTGAAATCTTGGTGGTAGAGTTCTTATATTTTGAACC TTTTTGTAAAGCTTATTGTATATATACATGTCTTTTATATATTACCTGTCTTTTTATATTCATATTTTATGTATGTTAAAAAATGCTTGGCCCTTTGAAT AGGGTATTGTAGTACTCACACATGCGAAAAGGCCATACTGAGTGGTTTAATTCATGTCTCTGCATTAAATAATGACTACTAACTATGAAAGGTTACATTT TGTGATTTGTGGTTTATGATAGTGTAATTTTATGTTACTTGCACAAGCATCTTCCATCCAAGGAGATGGAAGTAGTGATGACCGAATACAAGGTTTTGTG AGTGATACATTTTTAACCTTAAATCGACTGAATATTAGGTGAACCTGTCTCTTTTTGGTCCTCTTATTTTTTAGTTTTATGTGAATGTAGACATGCTTTC TGCATGCACTACTTGGTGGCTCTCCTGACTTGGTTTTATTTGGCAGGTAAATTATGGAAACTTCATGCATGGGCTTACAAAAGAGAATATCCAACTTAAC AGAAAGGTCCTGTCAGAGTTATCCATGCATGAACCATATAGCTTCAAGGCGCTAGTGGATATATCGCAGAAGGCATTTCCAGGAAACAAGAATGTGGTGA TTCCTCCAAGAAAGGTGAATTTGTAGAGCATTTGGCTCTTAACCAAACTATTAGATTAGAGCTAAGTTTCTATCAGAATTGGTAAGGACCTTTCAGGATT TTGGGTTTGGCACCCTACAATTTATTGTAAACTTGCATGCCTTTGATTCTTGTGACCATGTTGAGTACTGTTGTGGTCTTGATGTTACTCCTCCAGCCTC CCTTTTACTTGCTTCAGTATCAATAATTGATCAAATTGTTGCCATTATTAGACTCTATCAAAAGCTGAGATTTCACATTAGTTGGTTGTTTTGCATTTAC AAATTTCAACTTGGTTCTGAACCCAAAATGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_19891; |
| Additional information | - |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_240512
| Blastp | - |
|---|---|
| Blastx | 50S ribosomal protein L20 from Rhodospirillum with 73.33% of identity |
| Eggnog | Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity)(COG0292) |
| Kegg | Link to kegg annotations (RC1_2313) |
| CantataDB | Link to cantataDB annotations (CNT0001777) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_016167189.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |