| Id Trinity | FTRINITY_DN50287_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_240513 |
| Sequence | ATTTTGTATATAAAGAAAAAATCGATTTTGGCGAAAGCAAGAGCATCCTCAACACAACACTGCTTTCCCTGAAGCGCCGTTTGCTTTGCACTACTTGTTC TTTTTATTCTCCATTTCTACACTTCCTTTTTCTCCTTTTTATTTTATTTTGAAGAGTATAAAGAACTAGAAAAGAATATGAATAAGGATAAAATCTTCAA GCTTGCAAAGGGCTTCAGGGGGAGAGCTAAGAACTGCATAAGGATAGCAAGGGAGAGGGTGGAGAAGGCCTTGCAATATTCCTACAGAGACCGTCGTAAC AAAAAACGTGACATGCGATCCCTTTGGATACAACGGATCAATGCTGGAACCCGCCTTCATGGTGTATGTCTTCTATTCTAGTTGTTCTCTTTCCAAGTAA TAATATGGGGTTGATTTGTTGTGTAGAATTCAATACTTGAACAGGGAATGCAATATTGCTTCTAATATTTTCATCAAACTTCAATTTTTTATTGAAATCT TGGTGGTAGAGTTCTTATATTTTGAACCTTTTTGTAAAGCTTATTGTATATATACATGTCTTTTATATATTACCTGTCTTTTTATATTCATATTTTATGT ATGTTAAAAAATGCTTGGCCCTTTGAATAGGGTATTGTAGTACTCACACATGCGAAAAGGCCATACTGAGTGGTTTAATTCATGTCTCTGCATTAAATAA TGACTACTAACTATGAAAGGTTACATTTTGTGATTTGTGGTTTATGATAGTGTAATTTTATGTTACTTGCACAAGCATCTTCCATCCAAGGAGATGGAAG TAGTGATGACCGAATACAAGGTTTTGTGAGTGATACATTTTTAACCTTAAATCGACTGAATATTAGGTGAACCTGTCTCTTTTTGGTCCTCTTATTTTTT AGTTTTATGTGAATGTAGACATGCTTTCTGCATGCACTACTTGGTGGCTCTCCTGACTTGGTTTTATTTGGCAGGTAAATTATGGAAACTTCATGCATGG GCTTACAAAAGAGAATATCCAACTTAACAGAAAGGTCCTGTCAGAGTTATCCATGCATGAACCATATAGCTTCAAGGCGCTAGTGGATATATCGCAGAAG GCATTTCCAGGAAACAAGAATGTGGTGATTCCTCCAAGAAAGGTGAATTTGTAGAGCATTTGGCTCTTAACCAAACTATTAGATTAGAGCTAAGTTTCTA TCAGAATTGGTAAGGACCTTTCAGGATTTTGGGTTTGGCACCCTACAATTTATTGTAAACTTGCATGCCTTTGATTCTTGTGACCATGTTGAGTACTGTT GTGGTCTTGATGTTACTCCTCCAGCCTCCCTTTTACTTGCTTCAGTATCAATAATTGATCAAATTGTTGCCATTATTAGACTCTATCAAAAGCTGAGATT TCACATTAGTTGGTTGTTTTGCATTTACAAATTTCAACTTGGTTCTGAACCCAAAATGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_19891; |
| Additional information | - |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_240513
| Blastp | - |
|---|---|
| Blastx | 50S ribosomal protein L20 from Rhodospirillum with 73.33% of identity |
| Eggnog | Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity)(COG0292) |
| Kegg | Link to kegg annotations (RC1_2313) |
| CantataDB | Link to cantataDB annotations (CNT0001777) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_016167189.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |