| Id Trinity | FTRINITY_DN50287_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_240514 |
| Sequence | ATTTTGTATATAAAGAAAAAATCGATTTTGGCGAAAGCAAGAGCATCCTCAACACAACACTGCTTTCCCTGAAGCGCCGTTTGCTTTGCACTACTTGTTC TTTTTATTCTCCATTTCTACACTTCCTTTTTCTCCTTTTTATTTTATTTTGAAGGTATCCTTTTCTTTTTGTTTCTTTCAATTCTTAATTTGCAACCAAT CCCATTTCCCATTTCCACACCCCTTTTCGTCATTATATGATGTTGTTGTTTAGGTTTATGAGTACTTACTTCTATGTGTTTGATAAAATGTCTGACTTAG GTTTTTGCTGGGAATGTGTTTTTTTTAGTTTATATTCTGTGTTTTTTGGGTATGATTTATGAACCTAACCATTCACTTTTCTGTTATTCATTTGGTTTAA AGCTACAATCTTGTGCATAAGGGTCGTTGAATAGTGTATTTGAATCTGGAACACGGTTTTTAGTTTTACTCGGTAGAGCAATGACAGATTTTTTGTGCAT TCTGAGAGTATTATACCCCATGGATCAAAAAAAATATATAACACTTGAATTGTGAAATAGTTTTAGAAGTACTGAACCTGTAGTGAAAACTTTAATTTTT TTCAGTTTGGTGTCCCTTAAATTTTGGGGTTTTCGTATTGATCTTATTGATATAATTTTCACCTTTAATTTGGGAATTGGATCTTTGCTTTTGTTTTGTC CATGAATGATGAAAATGTAATTGCAGAGTATAAAGAACTAGAAAAGAATATGAATAAGGATAAAATCTTCAAGCTTGCAAAGGGCTTCAGGGGGAGAGCT AAGAACTGCATAAGGATAGCAAGGGAGAGGGTGGAGAAGGCCTTGCAATATTCCTACAGAGACCGTCGTAACAAAAAACGTGACATGCGATCCCTTTGGA TACAACGGATCAATGCTGGAACCCGCCTTCATGGTGTAAATTATGGAAACTTCATGCATGGGCTTACAAAAGAGAATATCCAACTTAACAGAAAGGTCCT GTCAGAGTTATCCATGCATGAACCATATAGCTTCAAGGCGCTAGTGGATATATCGCAGAAGGCATTTCCAGGAAACAAGAATGTGGTGATTCCTCCAAGA AAGGTGAATTTGTAGAGCATTTGGCTCTTAACCAAACTATTAGATTAGAGCTAAGTTTCTATCAGAATTGGTAAGGACCTTTCAGGATTTTGGGTTTGGC ACCCTACAATTTATTGTAAACTTGCATGCCTTTGATTCTTGTGACCATGTTGAGTACTGTTGTGGTCTTGATGTTACTCCTCCAGCCTCCCTTTTACTTG CTTCAGTATCAATAATTGATCAAATTGTTGCCATTATTAGACTCTATCAAAAGCTGAGATTTCACATTAGTTGGTTGTTTTGCATTTACAAATTTCAACT TGGTTCTGAACCCAAAATGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_19891; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_240514
| Blastp | 50S ribosomal protein L20 from Rhodospirillum with 64.42% of identity |
|---|---|
| Blastx | 50S ribosomal protein L20 from Rhodospirillum with 64.42% of identity |
| Eggnog | Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity)(COG0292) |
| Kegg | Link to kegg annotations (RC1_2313) |
| CantataDB | Link to cantataDB annotations (CNT0001777) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459247.1) |
| Pfam | Ribosomal protein L20 (PF00453.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |