Ll_transcript_232778

• Id Trinity: FTRINITY_DN50300_c0_g1_i1
• Name Transcript: Ll_transcript_232778
• Sequence: CACTGTGTTCTTTAAACCATAAACCCTCTTTCTCTCTCTTTCTCTTCCTCTCACGCCGTCACCACTATCATTCCTTCACTGCAATAACTTCAACCCAAGT CATGGTTCAAACAACAGAAGGGGCAACGAATTTCGTTGAAGCGGTTGCGTTCAGTTTTTTAACTCATCAAGAGTTGAAGAGGAGTAGTTGTGTAACTATT AAAAATCCCATTTTGCTCGATGGTCTCGATCGACCTGTACCTGAGGGATTGTATGATCCTGCTTTGGGTCCATTGGATGAGAAATCTCCTTGTAAAACAT GTGGTCAAACCTCGAAACATTGCCCTGGTCACTTTGGTCATATTGAGCTCATTTTACCTGCATTCAATCCTTTGATGTTCAATATTCTTAAAAATCTTCT ACAGATAACTTGTTTCTCTTGTCATCGTTTTAAGGCTAGCAGACCTGAGGTGGACTTGTGTACATCCCAATTGGAGCTCATTATAAAAGGGGATATTATC AAAGCCAAAAATTTGGGTTCACTTAATCCAGAGGAAGCCATGCATCTGGGTGATGATGACAAGAGCCAGTGTTTTAGTGCTGAACAAATGGGAGAAAAAT GGACTTCCCTTCAATTTAGTGAGGCAAAGTCTGTTCTAAGGAAGTTTCTAATCAAGAAATATAGGAAGTGTCAAAATTGCAAATCCATCAATCCTAAAAT CACTACACCAACCTTTGGATGGTTTCATAAGACTGTTCTTTCGGCTGCTCATACAAGATCAAATATCATTAATGCTCAAGATGAATTCATGTCAAGTGAA GCTATCAATGATGATATTTCTTTTGAAAACGGGGATACTACAGATGTAGAGGATGTTGCCTTGGATGGGACTGGTAAAAGTGCTTCTAAAAAGCATAATT TGTCTCACATGCTCGCTAAGCTAGACGAACGTTCTGGGTCTTTCTTACCATCAAAGGTTAAAAGCATTTTCAAGCATTTGTGGGAAAATGAGGCTCGACT TTGTTCTTATATTAGTGATATTCAAGGTCAGGGGTTTGGAAAGAACACAGGTCCGTCAATGTTCTTTCTGGAGAATATTTTTGTTCCACCAATCAAATTC CGTCCCCCTACCAAAGGAGGTGATAATGTAATGGAGCATCCTCAAACTGTTCTTTTGACTAAGGTTTTAGAGTCAAACGAGTCCTTACGAGATGCGTGGC GTGCATATCTAGACGCATCAGGTTCCTCAAAAGTTGTAAGCAGCCGGTGGATGGAACTTCAGAAATCCCTGAACATCCTAATTGACAATAAAACATCTGG TCAAAAAGAAGCTGCTACAGGAATTTGTCAGTTGCTGGAGAAGAAGGAAGGCATCTTCCGCCAGAAAATGATGGGAAAGAGGGTCAATTTTGCTTGCCGC TCTGTCATATCTCCTGATCCTTATTTAGCAGTCAATGAAATTGGGATTCCCCCATATTTTGCTCTAAGATTAACTTATCCTGAGAGAGTCACTCCTTGGA ATGTAGCCATGTTAAGGGATGCTATCCTTAACGGTCCTGAGTCGCATCCAGGTGCCACACACTATGCTGATAAAGTTTCAATAGTCAAGCTTCCTCCAAA AGGGAAGATGCTTTCTTTGACATCAAGGAAGTTACCTTCCTCTAGAGGGGTTATTTTGCAACATGGGAAGATATCTGATCAGGAATTCGAAGGTAAAGTT GTATATCGCCACTTGAAGGATGGTGATATTGTACTCGTCAATCGACAGCCTACACTTCATAAACCTAGTATAATGGCGCATGTAGTTCGTGTTTTAAAGG GGGAAAAAACAGTACGGATGCACTACGCAAATTGTAGTACTTACAATGCTGATTTTGACGGTGATGAAATTAATGTTCATTTTCCACAAGATGAAATTTC CCGATCTGAAGCCTACAATATTGTGAATGCCAACAATCAGTATGTGAAGCCTACCAGTGGGGATCCAATCAGAGCCTTGATTCAGGATCATATTGTAAGT GCTGCTCTTCTTACAAAAAGGGATACTTTTTTAAGATGTGAGGAGTTCAACCAACTTCTCTACAGTTCTGGTGTATCCATGGCTGGGATTGGCTCTTTCT GTGGCAAATCTGGGAAGAAAGTATTCATGTTAAGTACCGAGAGTGAAATGCTGATGTTTCCTCCAGCAATATGGAAGCCAGAGCCGCTATGGACAGGAAA ACAGGTTATCAGTGCGTTGCTATACTATATCACTAAAGGTTCTCCACCATTTACTGTGGAGAAGAATGCAAAAATCCCCTCTAATTTTTTCAAGACTCGA ATCAGTGAGGGAAATAAATGCAGTGAAGATACATCAAGAAAGAAGGACGAGCCTGATGAGGATAAATTGTTGATATATAGAAATGATTTGGTGCGTGGTG TAGTTGATAAGGCTCAATTTGGTGACTATGGTATGGTGCATACAGTGCAAGAGCTTTATGGCTCAAATGTTGCTGGCAATCTGCTTTCAGCATTAAGTCG TTTATTCACTAACTTTTTACAGATGCATGGGTTCACATGTGGAGTAGATGATCTTCTGATAACAGAAGAAAAGGATGGTGAAAGAATGGCACAACTTGAA AGCTGCGAGGAAATTGGTGACATTGTTCATCGTGAATTTGTTGGGGTCATGGATAATGCTAGATTAGACCCAATCACACTGCAGTTGAATATTGAGAAAA AAATACGCAGTAATGGAGAAGCAGCATTAACATACTTAGATAGGAAGATGATAAGTAATCTTAACACCAGGACAAGCTCAGGCATATTAAAGGAGTTACT ATCTGAAGGAATATTGAAATCCTCTGGAAAAAATTGGATTTCTCTCATGACTACATCCGGAGCTAAGGGTAGTATGGTCAATTTTCAGCAAATCTCGTCT CATCTAGGCCAGCAAGAGTTGGAAGGAAAACGAGTTCCACGCATGGTTTCTGGAAAGACCTTGCCATGCTTTACTCCCTGGGATTGTTCTCCTAGAGCAG GAGGGTTCATTATAGATCGTTTTCTCACTGCCCTTCGCCCACAGGAATATTATTTTCATTGCATGGCTGGTCGTGAAGGATTAGTTGATACTGCAGTCAA AACATCTCGGAGTGGTTACCTACAAAGATGCCTAATGAAAAATCTTGAGTGTCTTAAAGTTAGTTATGATCATACTGTTCGTGATTCTGATGGTTCGGTT ATCCAGTTTCACTATGGAGAAGATGGTGTAGATGTCCATCAAACTAGCTTTATCACCAAGTTTGAAGCATTGTCAACTAATAAAGAATTGGTTAATAGCA ACTTTTGTCGTCAGCTAGACAAATCCAGTCCTTACATTAACAAGTTGCCTGATGCTCTTGAAAGAAAAGCAAAAAAATTCATTCGTGAGAAACAGAGAAA CACTGGTTCAATAAAACGATCAGACTTCTTGAAGTTGATGGAGCACAAGTATATTTCGAGTCTTGCACAGCCTGGAGAGCCAGTTGGTGTGTTAGCTTCT CAGTCTGTTGGAGAACCAGCAACACAGATGACTTTGAATACGTTCCATCTTGCTGGTCGTGGTGAAATGAATGTGACACTTGGAATTCCACGTCTACAAG AGATCCTAATGGCTGCCGCAAGAGATATCAAGACTCCATTTATGTCATGCCCCTTGACCTTGATACCTGAAAAATCAATGGAAGATGCAATTCGTCTTGC AGATAAGTTGAAGAAGATCACCGTAGCTGACATAATTGAGAATATGGAAGTGTCTGTTGTACCAGTAGCTGTTCTTGATGGTCAGATTTGCAGTATATAT AAGCTTGAGATGAAGCTATACAAGCCTAAACACTATCCAAAGTACACTGATATAACAATTGCAGACTGGGAGGAAACTCTAAGCGTTGTTTTTGTGAGGG AGTTGGAGGATGCCATTGAGAATCACATGTCATTGCTCTCTAAGATTAGTGGCATACAAAATTTTAAGTCTGATCCACAATCAAGTTCTTCAAATGGTTC AGAAGACGTTGACAGCAATGGATTGGAATCTGAGAAAAAGGGTCACAATAATGACGAGGACGATGAAGATGGTGGTGAAGATACAGAAGGGGCTGACGAT CTTGGTTCAGATGCTCAAAAGCGAAAACAGCAAGGTACTGATGAGGTTGATTACGAGGATGGTGCTGAAGAGGACACACATGACGGTGAGCTATCAGAGG ATTTCGAAGATGACGAGGGTGTGGGTGATGTAAAAGTTAACGAGGATGGGCGTCATGTCATAGTTAACGATAATGATAGTGATATTGAATTTAGTGAGGG TGGTGAGAATGTGCCAAATGATGCCAATAATTCTCATGAACATGGAATGCAATCCAAGCCGAAGTCTACTAATGAAAAGAATAATTTGGAATCTGGAAAG AAAAAATCTGAATCAACAACAAAAAAATTTGACAGGCGATTTTTTGTTGAAGCGAAAGGGATGAATTTTAAGATCCACTTTAAATTTATCAATGAACCTC ACATTTTGTTGGCTCAGATTGCTCAGAAATCTGCTAAGAAGGTTTGCATCCAGAAGTTTGGAAAGGTTGGCGAATGTAAAGCTATTACATGCAAAGAAAG TGGAGTACTCTACAATGGTGAAGATGAAGGTAAGAAGGATGCAGAGAAAATACCAGCACTTCAGACATCAGGGATACATTTCCAAACATTCTGGGAGTTG CAAGATGATCTTGATGTTAACTATGTTTATTCAAACAACGTCTCCGAAATGCTAAATGCTTATGGGGTGGAAGCAGCCAGAGAGACCATCATAAGGGAAG TACAAAATGTGTTCAAGTCTTATGGGATATCAGTAAATATCCGGCATTTGACGCTTATTGCGGACTTTATGACACACTCCGGTAGCTATCGTCCAATGAG CAGAATGGGTAGCATAGCGGACTCCACATCCCCTTTCATCAAAATGTGCTTTGAGACAGCCTCCAAATTCATTGTTGAAGCAGCTTATCATGGACAAGTG GACACATTGGAAACTCCTTCAGCTAGAGTTTGCCTTGGTTTACCAGTAAAAATGGGAACTGGGTGCCATGAGCTGATCCAGAAGGTGGAAATATGATATA GCTGCCATGTTCCTCAGCTCAGACCTGTGGCAAGATTTTGACACATTACACAACAAAGTTTTGTTTGAAAAAATTAAATTGTCTTGGAGGTAGTGGTATT ATTATTGTATTAAATGCCATGCCTGGTGCAATATACAAGTGGTAGAAAGAATAGCTTCTTGTTCCTGTGCCATTTTCCTGATTATTTTAATATATTGTAT AACATATTGACATGTAATTTTATTTCAATGTTTTTACTTAGCTTTGATGATTTAAAGTATACTTTGTGGATGACCTTATTTAAGTTGTATGCAATTACCC ATTTTCATAAATTATACATTATTTTCTTCATTGCCAAAAAAAA
• Tissue: flowers
• Gene name: LI_gene_19912;
• Additional information: details;

Expression of Ll_transcript_232778

FPKM

• FPAB: 8.2
• FPNAB: 12.1
• LF1: 6
• LF2: 4.8
• LF3: 5.9
• LF4: 8.1
• UF1: 4.2
• UF2: 4.3
• UF3: 7.1
• UF4: 5.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_232778

• Blastp: DNA-directed RNA polymerase I subunit 1 from Arabidopsis with 55.14% of identity
• Blastx: DNA-directed RNA polymerase I subunit 1 from Arabidopsis with 55.5% of identity
• Eggnog: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
• Kegg: Link to kegg annotations (AT3G57660)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421167.1)
• Pfam: RNA polymerase Rpb1, domain 1 (PF04997.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;