Ll_transcript_232779

• Id Trinity: FTRINITY_DN50300_c0_g1_i2
• Name Transcript: Ll_transcript_232779
• Sequence: CACTGTGTTCTTTAAACCATAAACCCTCTTTCTCTCTCTTTCTCTTCCTCTCACGCCGTCACCACTATCATTCCTTCACTGCAATAACTTCAACCCAAGT CATGGTTCAAACAACAGAAGGGGCAACGAATTTCGTTGAAGCGGTTGCGTTCAGTTTTTTAACTCATCAAGAGTTGAAGAGGAGTAGTTGTGTAACTATT AAAAATCCCATTTTGCTCGATGGTCTCGATCGACCTGTACCTGAGGGATTGTATGATCCTGCTTTGGGTCCATTGGATGAGAAATCTCCTTGTAAAACAT GTGGTCAAACCTCGAAACATTGCCCTGGTCACTTTGGTCATATTGAGCTCATTTTACCTGCATTCAATCCTTTGATGTTCAATATTCTTAAAAATCTTCT ACAGATAACTTGTTTCTCTTGTCATCGTTTTAAGGCTAGCAGACCTGAGGTGGACTTGTGTACATCCCAATTGGAGCTCATTATAAAAGGGGATATTATC AAAGCCAAAAATTTGGGTTCACTTAATCCAGAGGAAGCCATGCATCTGGGTGATGATGACAAGAGCCAGTGTTTTAGTGCTGAACAAATGGGAGAAAAAT GGACTTCCCTTCAATTTAGTGAGGCAAAGTCTGTTCTAAGGAAGTTTCTAATCAAGAAATATAGGAAGTGTCAAAATTGCAAATCCATCAATCCTAAAAT CACTACACCAACCTTTGGATGGTTTCATAAGACTGTTCTTTCGGCTGCTCATACAAGATCAAATATCATTAATGCTCAAGATGAATTCATGTCAAGTGAA GCTATCAATGATGATATTTCTTTTGAAAACGGGGATACTACAGATGTAGAGGATGTTGCCTTGGATGGGACTGGTAAAAGTGCTTCTAAAAAGCATAATT TGTCTCACATGCTCGCTAAGCTAGACGAACGTTCTGGGTCTTTCTTACCATCAAAGGTTAAAAGCATTTTCAAGCATTTGTGGGAAAATGAGGCTCGACT TTGTTCTTATATTAGTGATATTCAAGGTCAGGGGTTTGGAAAGAACACAGGTCCGTCAATGTTCTTTCTGGAGAATATTTTTGTTCCACCAATCAAATTC CGTCCCCCTACCAAAGGAGGTGATAATGTAATGGAGCATCCTCAAACTGTTCTTTTGACTAAGGTTTTAGAGTCAAACGAGTCCTTACGAGATGCGTGGC GTGCATATCTAGACGCATCAGGTTCCTCAAAAGTTGTAAGCAGCCGGTGGATGGAACTTCAGAAATCCCTGAACATCCTAATTGACAATAAAACATCTGG TCAAAAAGAAGCTGCTACAGGAATTTGTCAGTTGCTGGAGAAGAAGGAAGGCATCTTCCGCCAGAAAATGATGGGAAAGAGGGTCAATTTTGCTTGCCGC TCTGTCATATCTCCTGATCCTTATTTAGCAGTCAATGAAATTGGGATTCCCCCATATTTTGCTCTAAGATTAACTTATCCTGAGAGAGTCACTCCTTGGA ATGTAGCCATGTTAAGGGATGCTATCCTTAACGGTCCTGAGTCGCATCCAGGTGCCACACACTATGCTGATAAAGTTTCAATAGTCAAGCTTCCTCCAAA AGGGAAGATGCTTTCTTTGACATCAAGGAAGTTACCTTCCTCTAGAGGGGTTATTTTGCAACATGGGAAGATATCTGATCAGGAATTCGAAGGTAAAGTT GTATATCGCCACTTGAAGGATGGTGATATTGTACTCGTCAATCGACAGCCTACACTTCATAAACCTAGTATAATGGCGCATGTAGTTCGTGTTTTAAAGG GGGAAAAAACAGTACGGATGCACTACGCAAATTGTAGTACTTACAATGCTGATTTTGACGGTGATGAAATTAATGTTCATTTTCCACAAGATGAAATTTC CCGATCTGAAGCCTACAATATTGTGAATGCCAACAATCAGTATGTGAAGCCTACCAGTGGGGATCCAATCAGAGCCTTGATTCAGGATCATATTGTAAGT GCTGCTCTTCTTACAAAAAGGGATACTTTTTTAAGATGTGAGGAGTTCAACCAACTTCTCTACAGTTCTGGTGTATCCATGGCTGGGATTGGCTCTTTCT GTGGCAAATCTGGGAAGAAAGTATTCATGTTAAGTACCGAGAGTGAAATGCTGATGTTTCCTCCAGCAATATGGAAGCCAGAGCCGCTATGGACAGGAAA ACAGGTTGTCATCTGTTAAGATTCTCCAAATTCATAACACTATAGGCACTATAACAGATTACTATCTAAATGAATTCAGACAACAATTTTTGTTGTCCTT TTTCCTCTTGTAGTTATTATTTCATAATGGCCGTATGTACATAATGGCTATATTGACAACATCTTGCCCCACTTGTTCACCATTTACTTCTTCTATTTAG ATGACATAATGGCTGTATGTACAATTTGTTTCTGCTGTCTCCCTAGGTTATCAGTGCGTTGCTATACTATATCACTAAAGGTTCTCCACCATTTACTGTG GAGAAGAATGCAAAAATCCCCTCTAATTTTTTCAAGACTCGAATCAGTGAGGGAAATAAATGCAGTGAAGATACATCAAGAAAGAAGGACGAGCCTGATG AGGATAAATTGTTGATATATAGAAATGATTTGGTGCGTGGTGTAGTTGATAAGGCTCAATTTGGTGACTATGGTATGGTGCATACAGTGCAAGAGCTTTA TGGCTCAAATGTTGCTGGCAATCTGCTTTCAGCATTAAGTCGTTTATTCACTAACTTTTTACAGATGCATGGGTTCACATGTGGAGTAGATGATCTTCTG ATAACAGAAGAAAAGGATGGTGAAAGAATGGCACAACTTGAAAGCTGCGAGGAAATTGGTGACATTGTTCATCGTGAATTTGTTGGGGTCATGGATAATG CTAGATTAGACCCAATCACACTGCAGTTGAATATTGAGAAAAAAATACGCAGTAATGGAGAAGCAGCATTAACATACTTAGATAGGAAGATGATAAGTAA TCTTAACACCAGGACAAGCTCAGGCATATTAAAGGAGTTACTATCTGAAGGAATATTGAAATCCTCTGGAAAAAATTGGATTTCTCTCATGACTACATCC GGAGCTAAGGGTAGTATGGTCAATTTTCAGCAAATCTCGTCTCATCTAGGCCAGCAAGAGTTGGAAGGAAAACGAGTTCCACGCATGGTTTCTGGAAAGA CCTTGCCATGCTTTACTCCCTGGGATTGTTCTCCTAGAGCAGGAGGGTTCATTATAGATCGTTTTCTCACTGCCCTTCGCCCACAGGAATATTATTTTCA TTGCATGGCTGGTCGTGAAGGATTAGTTGATACTGCAGTCAAAACATCTCGGAGTGGTTACCTACAAAGATGCCTAATGAAAAATCTTGAGTGTCTTAAA GTTAGTTATGATCATACTGTTCGTGATTCTGATGGTTCGGTTATCCAGTTTCACTATGGAGAAGATGGTGTAGATGTCCATCAAACTAGCTTTATCACCA AGTTTGAAGCATTGTCAACTAATAAAGAATTGGTTAATAGCAACTTTTGTCGTCAGCTAGACAAATCCAGTCCTTACATTAACAAGTTGCCTGATGCTCT TGAAAGAAAAGCAAAAAAATTCATTCGTGAGAAACAGAGAAACACTGGTTCAATAAAACGATCAGACTTCTTGAAGTTGATGGAGCACAAGTATATTTCG AGTCTTGCACAGCCTGGAGAGCCAGTTGGTGTGTTAGCTTCTCAGTCTGTTGGAGAACCAGCAACACAGATGACTTTGAATACGTTCCATCTTGCTGGTC GTGGTGAAATGAATGTGACACTTGGAATTCCACGTCTACAAGAGATCCTAATGGCTGCCGCAAGAGATATCAAGACTCCATTTATGTCATGCCCCTTGAC CTTGATACCTGAAAAATCAATGGAAGATGCAATTCGTCTTGCAGATAAGTTGAAGAAGATCACCGTAGCTGACATAATTGAGAATATGGAAGTGTCTGTT GTACCAGTAGCTGTTCTTGATGGTCAGATTTGCAGTATATATAAGCTTGAGATGAAGCTATACAAGCCTAAACACTATCCAAAGTACACTGATATAACAA TTGCAGACTGGGAGGAAACTCTAAGCGTTGTTTTTGTGAGGGAGTTGGAGGATGCCATTGAGAATCACATGTCATTGCTCTCTAAGATTAGTGGCATACA AAATTTTAAGTCTGATCCACAATCAAGTTCTTCAAATGGTTCAGAAGACGTTGACAGCAATGGATTGGAATCTGAGAAAAAGGGTCACAATAATGACGAG GACGATGAAGATGGTGGTGAAGATACAGAAGGGGCTGACGATCTTGGTTCAGATGCTCAAAAGCGAAAACAGCAAGGTACTGATGAGGTTGATTACGAGG ATGGTGCTGAAGAGGACACACATGACGGTGAGCTATCAGAGGATTTCGAAGATGACGAGGGTGTGGGTGATGTAAAAGTTAACGAGGATGGGCGTCATGT CATAGTTAACGATAATGATAGTGATATTGAATTTAGTGAGGGTGGTGAGAATGTGCCAAATGATGCCAATAATTCTCATGAACATGGAATGCAATCCAAG CCGAAGTCTACTAATGAAAAGAATAATTTGGAATCTGGAAAGAAAAAATCTGAATCAACAACAAAAAAATTTGACAGGCGATTTTTTGTTGAAGCGAAAG GGATGAATTTTAAGATCCACTTTAAATTTATCAATGAACCTCACATTTTGTTGGCTCAGATTGCTCAGAAATCTGCTAAGAAGGTTTGCATCCAGAAGTT TGGAAAGGTTGGCGAATGTAAAGCTATTACATGCAAAGAAAGTGGAGTACTCTACAATGGTGAAGATGAAGGTAAGAAGGATGCAGAGAAAATACCAGCA CTTCAGACATCAGGGATACATTTCCAAACATTCTGGGAGTTGCAAGATGATCTTGATGTTAACTATGTTTATTCAAACAACGTCTCCGAAATGCTAAATG CTTATGGGGTGGAAGCAGCCAGAGAGACCATCATAAGGGAAGTACAAAATGTGTTCAAGTCTTATGGGATATCAGTAAATATCCGGCATTTGACGCTTAT TGCGGACTTTATGACACACTCCGGTAGCTATCGTCCAATGAGCAGAATGGGTAGCATAGCGGACTCCACATCCCCTTTCATCAAAATGTGCTTTGAGACA GCCTCCAAATTCATTGTTGAAGCAGCTTATCATGGACAAGTGGACACATTGGAAACTCCTTCAGCTAGAGTTTGCCTTGGTTTACCAGTAAAAATGGGAA CTGGGTGCCATGAGCTGATCCAGAAGGTGGAAATATGATATAGCTGCCATGTTCCTCAGCTCAGACCTGTGGCAAGATTTTGACACATTACACAACAAAG TTTTGTTTGAAAAAATTAAATTGTCTTGGAGGTAGTGGTATTATTATTGTATTAAATGCCATGCCTGGTGCAATATACAAGTGGTAGAAAGAATAGCTTC TTGTTCCTGTGCCATTTTCCTGATTATTTTAATATATTGTATAACATATTGACATGTAATTTTATTTCAATGTTTTTACTTAGCTTTGATGATTTAAAGT ATACTTTGTGGATGACCTTATTTAAGTTGTATGCAATTACCCATTTTCATAAATTATACATTATTTTCTTCATTGCCAAAAAAAA
• Tissue: flowers
• Gene name: LI_gene_19912;
• Additional information: details;

Expression of Ll_transcript_232779

FPKM

• FPAB: 0.2
• FPNAB: 0.8
• LF1: 0
• LF2: 0.3
• LF3: 0.3
• LF4: 0.1
• UF1: 0.1
• UF2: 0.3
• UF3: 0.4
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_232779

• Blastp: DNA-directed RNA polymerase I subunit 1 from Arabidopsis with 55.76% of identity
• Blastx: DNA-directed RNA polymerase I subunit 1 from Arabidopsis with 56.35% of identity
• Eggnog: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
• Kegg: Link to kegg annotations (AT3G57660)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421167.1)
• Pfam: RNA polymerase Rpb1, domain 3 (PF04983.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;