| Id Trinity | FTRINITY_DN50300_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_232781 |
| Sequence | CACTGTGTTCTTTAAACCATAAACCCTCTTTCTCTCTCTTTCTCTTCCTCTCACGCCGTCACCACTATCATTCCTTCACTGCAATAACTTCAACCCAAGT CATGGTTCAAACAACAGAAGGGGCAACGAATTTCGTTGAAGCGGTTGCGTTCAGTTTTTTAACTCATCAAGAGTTGAAGAGGAGTAGTTGTGTAACTATT AAAAATCCCATTTTGCTCGATGGTCTCGATCGACCTGTACCTGAGGGATTGTATGATCCTGCTTTGGGTCCATTGGATGAGAAATCTCCTTGTAAAACAT GTGGTCAAACCTCGAAACATTGCCCTGGTCACTTTGGTCATATTGAGCTCATTTTACCTGCATTCAATCCTTTGATGTTCAATATTCTTAAAAATCTTCT ACAGATAACTTGTTTCTCTTGTCATCGTTTTAAGGCTAGCAGACCTGAGGTGGACTTGTGTACATCCCAATTGGAGCTCATTATAAAAGGGGATATTATC AAAGCCAAAAATTTGGGTTCACTTAATCCAGAGGAAGCCATGCATCTGGGTGATGATGACAAGAGCCAGTGTTTTAGTGCTGAACAAATGGGAGAAAAAT GGACTTCCCTTCAATTTAGTGAGGCAAAGTCTGTTCTAAGGAAGTTTCTAATCAAGAAATATAGGAAGTGTCAAAATTGCAAATCCATCAATCCTAAAAT CACTACACCAACCTTTGGATGGTTTCATAAGACTGTTCTTTCGGCTGCTCATACAAGATCAAATATCATTAATGCTCAAGATGAATTCATGTCAAGTGAA GCTATCAATGATGATATTTCTTTTGAAAACGGGGATACTACAGATGTAGAGGATGTTGCCTTGGATGGGACTGGTAAAAGTGCTTCTAAAAAGCATAATT TGTCTCACATGCTCGCTAAGCTAGACGAACGTTCTGGGTCTTTCTTACCATCAAAGGTTAAAAGCATTTTCAAGCATTTGTGGGAAAATGAGGCTCGACT TTGTTCTTATATTAGTGATATTCAAGGTCAGGGGTTTGGAAAGAACACAGGTCCGTCAATGTTCTTTCTGGAGAATATTTTTGTTCCACCAATCAAATTC CGTCCCCCTACCAAAGGAGGTGATAATGTAATGGAGCATCCTCAAACTGTTCTTTTGACTAAGGTTTTAGAGTCAAACGAGTCCTTACGAGATGCGTGGC GTGCATATCTAGACGCATCAGGTTCCTCAAAAGTTGTAAGCAGCCGGTGGATGGAACTTCAGAAATCCCTGAACATCCTAATTGACAATAAAACATCTGG TCAAAAAGAAGCTGCTACAGGAATTTGTCAGTTGCTGGAGAAGAAGGAAGGCATCTTCCGCCAGAAAATGATGGGAAAGAGGGTCAATTTTGCTTGCCGC TCTGTCATATCTCCTGATCCTTATTTAGCAGTCAATGAAATTGGGATTCCCCCATATTTTGCTCTAAGATTAACTTATCCTGAGAGAGTCACTCCTTGGA ATGTAGCCATGTTAAGGGATGCTATCCTTAACGGTCCTGAGTCGCATCCAGGTGCCACACACTATGCTGATAAAGTTTCAATAGTCAAGCTTCCTCCAAA AGGGAAGATGCTTTCTTTGACATCAAGGAAGTTACCTTCCTCTAGAGGGGTTATTTTGCAACATGGGAAGATATCTGATCAGGAATTCGAAGGTAAAGTT GTATATCGCCACTTGAAGGATGGTGATATTGTACTCGTCAATCGACAGCCTACACTTCATAAACCTAGTATAATGGCGCATGTAGTTCGTGTTTTAAAGG GGGAAAAAACAGTACGGATGCACTACGCAAATTGTAGTACTTACAATGCTGATTTTGACGGTGATGAAATTAATGTTCATTTTCCACAAGATGAAATTTC CCGATCTGAAGCCTACAATATTGTGAATGCCAACAATCAGTATGTGAAGCCTACCAGTGGGGATCCAATCAGAGCCTTGATTCAGGATCATATTGTAAGT GCTGCTCTTCTTACAAAAAGGGATACTTTTTTAAGATGTGAGGAGTTCAACCAACTTCTCTACAGTTCTGGTGTATCCATGGCTGGGATTGGCTCTTTCT GTGGCAAATCTGGGAAGAAAGTATTCATGTTAAGTACCGAGAGTGAAATGCTGATGTTTCCTCCAGCAATATGGAAGCCAGAGCCGCTATGGACAGGAAA ACAGGTTATCAGTGCGTTGCTATACTATATCACTAAAGGTTCTCCACCATTTACTGTGGAGAAGAATGCAAAAATCCCCTCTAATTTTTTCAAGACTCGA ATCAGTGAGGGAAATAAATGCAGTGAAGATACATCAAGAAAGAAGGACGAGCCTGATGAGGATAAATTGTTGATATATAGAAATGATTTGGTGCGTGGTG TAGTTGATAAGGCTCAATTTGGTGACTATGGTATGGTGCATACAGTGCAAGAGCTTTATGGCTCAAATGTTGCTGGCAATCTGCTTTCAGCATTAAGTCG TTTATTCACTAACTTTTTACAGATGCATGGGTTCACATGTGGAGTAGATGATCTTCTGATAACAGAAGAAAAGGATGGTGAAAGAATGGCACAACTTGAA AGCTGCGAGGAAATTGGTGACATTGTTCATCGTGAATTTGTTGGGGTCATGGATAATGCTAGATTAGACCCAATCACACTGCAGTTGAATATTGAGAAAA AAATACGCAGTAATGGAGAAGCAGCATTAACATACTTAGATAGGAAGATGATAAGTAATCTTAACACCAGGACAAGCTCAGGCATATTAAAGGAGTTACT ATCTGAAGGAATATTGAAATCCTCTGGAAAAAATTGGATTTCTCTCATGACTACATCCGGAGCTAAGGGTAGTATGGTCAATTTTCAGCAAATCTCGTCT CATCTAGGCCAGCAAGAGTTGGAAGGAAAACGAGTTCCACGCATGGTTTCTGGAAAGACCTTGCCATGCTTTACTCCCTGGGATTGTTCTCCTAGAGCAG GAGGGTTCATTATAGATCGTTTTCTCACTGCCCTTCGCCCACAGGAATATTATTTTCATTGCATGGCTGGTCGTGAAGGATTAGTTGATACTGCAGTCAA AACATCTCGGAGTGGTTACCTACAAAGATGCCTAATGAAAAATCTTGAGTGTCTTAAAGTTAGTTATGATCATACTGTTCGTGATTCTGATGGTTCGGTT ATCCAGTTTCACTATGGAGAAGATGGTGTAGATGTCCATCAAACTAGCTTTATCACCAAGTTTGAAGCATTGTCAACTAATAAAGAATTGGTTAATAGCA ACTTTTGTCGTCAGCTAGACAAATCCAGTCCTTACATTAACAAGTTGCCTGATGCTCTTGAAAGAAAAGCAAAAAAATTCATTCGTGAGAAACAGAGAAA CACTGGTTCAATAAAACGATCAGACTTCTTGAAGTTGATGGAGCACAAGTATATTTCGAGTCTTGCACAGCCTGGAGAGCCAGTTGGTGTGTTAGCTTCT CAGTCTGTTGGAGAACCAGCAACACAGATGACTTTGAATACGTTCCATCTTGCTGGTCGTGGTGAAATGAATGTGACACTTGGAATTCCACGTCTACAAG AGATCCTAATGGCTGCCGCAAGAGATATCAAGACTCCATTTATGTCATGCCCCTTGACCTTGATACCTGAAAAATCAATGGAAGATGCAATTCGTCTTGC AGATAAGTTGAAGAAGATCACCGTAGCTGACATAATTGAGAATATGGAAGTGTCTGTTGTACCAGTAGCTGTTCTTGATGGTCAGATTTGCAGTATATAT AAGCTTGAGATGAAGCTATACAAGCCTAAACACTATCCAAAGTACACTGATATAACAATTGCAGACTGGGAGGAAACTCTAAGCGTTGTTTTTGTGAGGG AGTTGGAGGATGCCATTGAGAATCACATGTCATTGCTCTCTAAGATTAGTGGCATACAAAATTTTAAGTCTGATCCACAATCAAGTTCTTCAAATGGTTC AGAAGACGTTGACAGCAATGGATTGGAATCTGAGAAAAAGGGTCACAATAATGACGAGGACGATGAAGATGGTGGTGAAGATACAGAAGGGGCTGACGAT CTTGGTTCAGATGCTCAAAAGCGAAAACAGCAAGGTACTGATGAGGTTGATTACGAGGATGGTGCTGAAGAGGACACACATGACGGTGAGCTATCAGAGG ATTTCGAAGATGACGAGGGTGTGGGTGATGTAAAAGTTAACGAGGATGGGCGTCATGTCATAGTTAACGATAATGATAGTGATATTGAATTTAGTGAGGG TGGTGAGAATGTGCCAAATGATGCCAATAATTCTCATGAACATGGAATGCAATCCAAGCCGAAGTCTACTAATGAAAAGAATAATTTGGAATCTGGAAAG AAAAAATCTGAATCAACAACAAAAAAATTTGACAGGCGATTTTTTGTTGAAGCGAAAGGGATGAATTTTAAGATCCACTTTAAATTTATCAATGAACCTC ACATTTTGTTGGCTCAGGTACTTTCATGCCTGACCTCTTTTTTTCTTCACCTATGTCAATGTTGTTTTAATTATTATCTGAGATGGATAGTTTCATACTA CAAACAGTCTATTTCTATATTCCCGTAGATTATATCATTATGTGCACCAGAAATAGGTTGATTTCTGCCTACGTCGTGGCCCCTTTAATTGTTTGGATCA GGTGTCATAATTGTGTACCATGGGTGTCTTTGAAGACGCTAGCATAGTAAGTTTGGATGGAGATTTAGTACAAAATGATAGGTCTAAATGCATTTCATGC AGTTAGTATTAGTTACTTCATTTATGTGATTATGTCCTTGGTTCTTGACAATGTAAAGAAGATGCTAGCATAGTAGATTGGATGGAGATTTAGTTGTTTC CTTTCATTAGTCATTTTCTGATCTCTTCCCTCCTTCTGAAATCAGAAATACTATCTGGCAGATATAGTCCTGTGCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_19912; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_232781
| Blastp | DNA-directed RNA polymerase I subunit 1 from Arabidopsis with 54.39% of identity |
|---|---|
| Blastx | DNA-directed RNA polymerase I subunit 1 from Arabidopsis with 54.78% of identity |
| Eggnog | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086) |
| Kegg | Link to kegg annotations (AT3G57660) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421167.1) |
| Pfam | RNA polymerase Rpb1, domain 1 (PF04997.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |