| Id Trinity | FTRINITY_DN50342_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_232905 |
| Sequence | CCCTAGGTGGTGCTATCACAGTGTCGTTACTCCAAAGAGAATAAAAGAGTTGAATTGAAACCTAAACATTTGAACCTCTTCTTCTCCGCGAAACCCTAAC AATGGCTACCTCCATAGCCTCTCAGCTCCAAGCTATCAGATCACTCGTCCAATCCGACTCTCACTCTCTCAAGAGACCTTTCTCTCGCCCTTCCATCCTG TTCGATCCTAAGGAAGCTGCTGATATCGATCTCCAATCTATTTTCAACATCGCACTCGAAGGTTTGGAGGTTCTTATAAGCGCAGATGAGCGGTTCAGGA ACTATAAGAACGATTTGTTCAGCCACCGAAGTAAAGAGTTGGATAGAGAGTTGATGGGCATAGAGCAGAACAATCAACTCAATTCATCCATTGCTTCATA TTTAAAGTTACTTTCAGGCTATTTTCATCTTCCGTCAGCTCTTAAAACAATTGAGTACTTGATACGTAGACACAAGGTTCATGTATACAACACCGAAGAG TTGATTCTATGTGCTCTGCCTTTCCATGACACACATGAATTTGTTCGAATAGTACAGATACTTGACACAAGGAATAATACCAAATGGGGGTTTCTCGATG GTGTGAAAGTCTCTGGTGCACCACCACCTAGAACTGTCATAGTGCAGCAGTGTATACGTGACAAGGGTATCTTAGAAGTTCTAAGTAACTATGCATCCCC GTCAAAAAAGTTTCAACCTTCAAGGCATGTAATAGGTTTCTGTACTGCTGTTTTTGTTGAAGTTTTGGGTAGTTCTGTAACGGTTAATGATGATGTAGTC AAGAGAATACTTCCTTACGTGGTCTCTGGTCTTCAGTCTGGCATTAAGGGCATTTCAGACCACAAGGCTGGTTCTTTAATGATTGTTGGTTTACTTGGAA ATAGAGCTGCATTAGCTCCCAAACTTCTGAACAGTCTGATACGTTCAGTCGCTGAGGTTGCTCGTGAGGAGGCAAAAGAGTTAACTGATCTTCAGTGGTT TCGGCTGTCCATAATTGCCTTGATAAATCTTGTTCAGTCACAAAATGTTGACATACTTCCTACCAAGGCATTGGAGATTCTAAAAGAAATAAGGGACTTG GCAGAGGTTTTGTTAGAATTGTCTAGGGAGTTCAATATTGAAAAATTTCTTCTTGTGCTTTTGGACTCCCTGATTAACTGCAGTTCTTCTGATGAATACT GTCAACGGGCTTTGCTATCTATAATAGAAAAAGTCCCCATCAGTGGATCTGTTTATCATGTGGTCACTAAGATCCTATCAACTTGTGTGAAATTATCACA AAAAACTGGTGACTCAGCATCTTCCGTGTCAGAGATTACACTACAAGTTGGAAACAACCACTCTTTTTGTGGGGTTAAAGCAGCGTTCATTTACTCTACC AAAAACCCACCAGCTGGGTGGGCAAAAAAAATTATGATAATTGTTAATACGAAGTATCCTTCTGCACTACGTGGAGCAGTTCAGCATTTCCTTCAGGATA ATAAAGCGCATTCTATGAAAGATGACAAACTATATAAGGTTTTATGTAAGATGTTGGATGGCAATTTGGACTCATCACATGGTATATCAGATTCAAAAAT TTGGTTTGCCTTGCATCATCCGAAGGCTGATGTTAGACGTGCTACATTGCTTGATTTAAATTCATCTGGCATGCTGAAGACCAAAGCAGTTGCTTCAGAG AGTCTTATAGACATCGAAGAGGCAATATTGAGACAGCTTGATGATAAAGATCTAACAGTTGTTCAAGCAGCATTATCTATTGATGGCTTGCAAAATGCAA TAGATTCTTCTAAGCTTCTTGATGCACTGCAGAAGGTGCTAAGAAAATGTTTTGGCATGCTGGTGTCTGGTTCAACTGAAAACATTAGTTTAACCGTCAA TGTTTGTGTCATTTGTCTAAAGAATGCCATTTCATACTTCCATGATCTTAGTGGTTACTTGAACAAAGTTGCTTCCATGATTTTTCCTTTACTCCTTGTT TTACTACAGACACAACACTTGAATTTGAAGGCTCTTGGTTTAGTTGAAAAAATAAACTGGCCACTTTATCAGAACATTGCTGTTTCTTCCCCTGGAGAAT TGACATCAATACCTGGAAGTTTATCTTCAATTAACTTGAGAACTATCAATAACATGGCCGAGAATTTCATGGTCCAACCTGAAGATCATATTGCTTGGTT TGTTGACAACTGCAGTGATTTGGAATTGTCGAAGACATTGTTCTTTTTTGTTGTATTGCAATCTCTTTTGATCAAACCAAAAGGCGATGACTTCTCTGCA CTTTTTGAAAGTGTATTTCCTATTCTAAAGGCTGAGTGGAAATCCTTAGTGACTGCTGGTGATGTTCCCTTGGAAGAGTTTAATTCGGAAATGTTAGACT GGGATTGCAGTGCATTCTTTGATCATCTTTCGGTTGCTAGTCTTGGACCTTTAAATACAAAACTATTGGTTTGCATATTTTGGAGGCTGCTATCAGCACT AATATCAGTAGTTCCTTCAGATATTATACTGGATGATGATAATAAGTGGGTCAGCAGGATAAAGGACCTGTTTGTATTTTTTGCAACCTCACAATTCAAG AATTCTTTCAATGAACACCTCCATTACTTAGCGGCACATTGCAAAATATCACCTGCCCGCCTCTTATCTAAGTTCTTCACAGGGGAAGGTGTTCCTGTTG CAGTCCAGGTTGAAAGTCTGCAGTGCTATACTTTTCTCTGTAGTTTGTCACAAGATAGATGGCAAATTGAACTTTTAGCCGAATTTCCTTCCGTGCTTGT TCCATTGGCTGGTGATAACCAGACTATAAGGATTGCTGCCATGAACTGTATCGATGGGCTACATGCATTGTGGTGTCGTATCGAACCTCCTGGCAAGAAA AATGGTAGCAATTTTCTTGGTGAATGCAATTTTCTCGGTGAACTTCTACGGTTGATGGATGAGCAAAAAACACTTATATTGTCTGACAGGAAATTTCTTC CTTCTCTGTTTGCATCCATGCTGAGCTTATCCTGTCATAACATCTTAGTACCTCAAAATATAGAAAACAGGTTTGATCAGCCTGCAAAAGAAAAAATTCT TGGATTCATATTGCGTTCTGTTCCGAAATTCTCTAACTATGGGAAGCTAATGATTTTATCCTTGCTCAAAGGAATTGGGAGTGTTATTATGCACGTCAAA GAATACTGTGATGTGCTAGATACATCTTGTCAGAAATTGTCAAAAACTGAAATTCAGATAAAGTGCCTTTTGCTGGAGAGCTGTGTTATGTCATATTCTT CTGGTGGAAATGATCTGCAAGGTCATTTACTGAAGGCTTTGCAGTTGGATGCTACGACTTCAGATGACCCTGCGTATGTAGAGCCATGTATCACTGTCTT AAACAAACTTCACAACGAATTCTATAAGGGGTTGAAGAATGAAGTGAAGGAGCTTTTATTTTGTGAGCTTGTATTTTTGTGCCGCAATGCTAATGGTGCC ATACAGAGTGCAACCAGAGATGCCATAATGCGTATAGATATTGATTTCTCGACTGTTGGTCACATGCTTGATCTCATAATTAAACATGAAAATTTTGTGG GTAGTTCAATGTATGAAAAGACGGCGAAGAAACAGAAATTGACAGTAAATCAAGACGCAGACCTTCCCCCAAGTGACATATGTGGAGGAGTTGATCCAGT CTACGTCATTAGTTCTCTTCTTGATGTTTTGCTGCTAAAGAAAGACATAACATCCAGAGATTTGCTTTTAGGCCCCTTATTTAAGCTGCTTAGCACAGTA TTTTCAAAAGAATGGGTAAACAATGCACTTTCCCTCGAGACAACGTTAAGTCAACCTTTGTCAAGTTCATCTGAAGCCCACACTGCCATAATCTGTCATA TTCAACAGACACTGTTGATTATCCTCGAGGATATAGTTAGGTCATTTAAGAGCATAGCTCCACTAAAAGGAAAAATAGCAAATGTAATTGACATTAAGCT ACTGATAGAGTGTGCACGTACTTCAAACGATGTGGCCACCCGCAACCATGTATTTTCTCTTCTTGCTACCGTTACCAGAGTCTTACCAGAAGAAGTTTTG GGGCATATACTTGATATTATTGAAATTATTGGACAATCAGCAGTCATACAGATTGACACCCATTCAAAGCATGTTTTTGAGGATCTTATATCTGCGATTG TTCCTTGTTGGTTGTCTAAGACAGACGACGTGGAGAAGCTACTGAAGATTTTTGTAGATATATTGCCTGAAATTGTTGAGCACAGAAGACTCTCAATTGT TTTATATTTGTTAAGAACTTTGGGTGAGGGTAAAAGCTTGGCCTCATTGCTTAGCCTGCTTCTCTCTTCGTTAGTTTCAAGGAAAGCTACCTCTTTCCTT AACAGCGAGACTACAGATGCTTTAGCATTTTATACCAGAGAGTGGGAATTTAATTTTGCAGTGCAAATTTGCGAACAATATACAAGTATTAACTGGCTTC CTGCTTTAGTTGCGGTTTTTGAGCAGAATGGAATTAGTAACATTGGCCAGGGACAGTTTCTGGAGTTGTTTCTTGCAATGCAATTGACGCTGCAAAAATT CCAAGAACCAGAATTTGTGTTGAAGTTGGAATCAGGAGAGGACACGGATGTGATCCAGAGAGCATTGGGACAACTGATGGAACAGATCGTTTTCCTCTTG CATGTTGTAGATGCAAGAAAAAAGCAACTCAATTTGCCTGTCATTGTGAGGAAAGAGTTAAAGGAAATTATGCGTGCTGTTGTGAGGAATATAACCTTGG TCATGACACCGTCGGCATACTTTAAAAGCATAATTAATTTGCTCCAGCATGCTGATAAAAATGTTGGGAAAAAGGCTCTTGGTTTGTTATGTGAGACTGC AAGAAGTCATAAAAATGTCAGTTTAAAGCTGAAAGACAAGAAAGGTTCAAGGTCAAATCCAAGTTTTAGTTGGCTTCATATGAATGAAAGTTCTCAAGAA TCACTTAATAATATGTGTTTAGAAATTATTCGAGTACTTGATGATTCGTCTGATGTCTCTTTGAAAGTGGCTGCTGTTTCAGCATTAGAAATTTTGGCAG ACAGATTTTCTTCAAATAGTTCCATCTTTAGTGTTTGCCTTGGACCTGTTACCAGATGTATCACATCTAACATCCCGGTTGTTACTTCTAGCTGCCTTCG AGCAACTGCTGCCTTGGTCAATGTTTTAGGTCCTAAAGCACTGGCAGAACTTCCTCAGATTATGGACAGTGTGATGAAGTCCTCTCGTCAAGTGTTGTCT AAATCTGATACAAAACCCAAAACTAATGAGGTTTTATCAGCCTCCAATGAGTCCCATTTGTTTTCAGTTCTCATCACTTTGGAAGCAGTTGTGGACAAGC TTGGTGGATTTCTAAATCCATATCTGACTAATATCATGGAGCTTCTGGTGCTTCATCCCGAGTATGTCTCAGGAATAGATGCAAAGTTGGAGTCTAGAGC TCATGGAGTACGAAAGCTTCTAGCTGAAAAAATTCCTGTTCGACTTGTGCTGCCACCATTGTTAAAATTATACTCTGCTGCCATTGAGGCTGGGGATAAT AGCTTGACAATTGTATTTGATATGTTGGCAACCTTGGTTGGTACAATGGACAGATCATCTATTGTGGCGTTCCATGCTAAAGTTTTTGAATTTTGTTTGG TTGCTCTTGATCTTCGGTTCCAAAGTCCTCCTTCAGTTCAAAACATTGATGCAGTAGAGAAGAATGTCATTAATGCAATGGTTGCTCTGACCCTAAAACT TACTGAGAGCATGTTCAAGCCTCTTTTTGTTAAAAGTATTGAGTGGGCAGAATCCGAAGTGGATGAAACTGCATCTGCAGGAAACGTTGATAGGGCCATA TCATTCTATGCCATGGTAAATAAACTTGCGGAGAGCCACAGGTCATTATTTGTTCCATACTTTAAACACTTGCTTGGTAACTGTGTTCATCATCTTGATG ATGGTGGAGATGTGAAAGCATCCGGATTGAATAGGAAGAAAAAGAAGGCCAAGACTCAGGAAGGGGACAGTGTGTCTATAAAGAGCTGGCATCTCAGGAC ATTAGTTCTGTCATCCTTACACAAGTGTTTCCTCTATGACACTGGGAATTTGAAATTTCTTGACTCCTCAAATTTCCAGGTGCTTTTGAAACCTACAGTC TCACAACTTATCGTAGATCCACCAGCTTCGCTGGAAGACAGCACGAATATACCTAGCGTGAAGGAAGTCGATGACCTACTAGTTGTGAGCATTGGTCAAA TGGCTGTGACTGCTGGATCTGATCTTTTGTGGAAACCCTTAAACCATGAGGTGCTGATGCATACAAGGAGTGAAAAGTTGAGACCTAGAATATTGGGACT CAGAATAGTGAAATATCTAGTGGAGAACTTGAAAGAAGAGTATCTGGTATTATTGGCCGAAACAATACCCTTCCTTGGTGAACTGCTTGAGGATGTGGAT CTTTCAGTTAAAACTCTTGCTCAGGAAATTCTCCAAGAAATGGAATCTATGAGTGGGGAAAGCCTTCGCCAATATCTGTGATGTATCTTATGAATCTATT ACTTTTACTGCTAATTGTATTTTGTCATCTAATGTGTACTATGCTTATGTTTTTTAAGGAAGAGAAGCATTTTTGGTAGTATAAGGGTGATAAATTTATT CTTATTTATAAACCGAGAGTCCAAAGAAGATTACAAATAAACTGTTGTTTTTATATAGCTTCGTGAAAGAGACATTATGTTAAGAAATGAAATCAACAAG AGAATTGACC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_19993; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_232905
| Blastp | Uncharacterized protein At3g06530 from Arabidopsis with 46.64% of identity |
|---|---|
| Blastx | Uncharacterized protein At3g06530 from Arabidopsis with 46.57% of identity |
| Eggnog | U3 small nucleolar RNA-associated protein 10(ENOG410XNQQ) |
| Kegg | Link to kegg annotations (AT3G06530) |
| CantataDB | Link to cantataDB annotations (CNT0001374) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435540.1) |
| Pfam | U3 small nucleolar RNA-associated protein 10 (PF12397.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |