| Id Trinity | FTRINITY_DN50617_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_194551 |
| Sequence | CGATCTCAGATATCAACCTTTAGTTATAAAGACACCGTATGGCTGCCATTCATGCACGATTGTCACGTTTTCACCGTTAGATATAAAATAATCAAACGGC TACGAGTTGTGCATTAGAACAGCAGAACATGCGCAGCGGAACATTCAACTACTGAAGAGAGAGAAAGAAAGTTGAGTTGGAGAAGAAGCAAGATGAAGCA AAGTGGAGGAATGGGAAATGGGTCGCAGGAAAGGAACCAACTTGTTCGAGCTAGTCATGGTTCAGATAATGGGTCTAATAAACCCTTGAAGAATCTGAAT GGTCAAGTTTGTGAAGTATGTGGTGATACTGTTGGATTTACCACCACTGGTGATGTGTTTGTTGATTGTCAAGAGTGTGGCTTCCCACTTTGCCATAATT GCTATGAATATGAGCTGAAAAATGGGAACCAATCTTGCCCCAAGTGCAAGACTAGATACAAGAGTCACAAAGTGATTCCTCAATTGGGGGGAGATGATCA GGACGATGATGTTGATAATCCAGAGAATGAGGCCAGTTATGGACAAGGAAATACTAAGACAGGGCTGCAGTGGGAAGAAGAAGCTGACCTATCTTCGTCT TCCGGACATGATTCTCAACAACCAAAATCCCATCTCACAAATGGGCAGCTGGTAATGTACTGAACTTATTTTTGCGACTCTTAACTTGGGAAAACTGATG AGTTTTACAGCAAAAATGGGTCAACTTAGTTATCAACTTAATTGGTCAAAACCTTGCTTTGACTCAGTTGCATTTACACAAACATGAGTGAACTTTGAAA ATTATGAAACTTTTGAAGATCTTGCTCTCCTTTTTCCTTCTTGACATTGTGATTTGCCTGCAATAGTCATGTTGCTTGATTAGACATTTAATATTAATGT GACATTAGTTGTTTCAAAGTTTGTTATGCATTTTGGTTATGGATGTTAACATAGCATTGTTTTCATGGACACTAACATTTATAATGTTGGCTAACTTAAC AAGTTTATGATTCAAGTGTACCCACTCTCCAAAAGTTTACTTAAATAGCCTTGTGAGTTTCACAACTTTGCTCGTCGCTTGTCAAATGTTGTCAGTGTTC TTTAATCTTTATCTGTGATGTAAAATTGGGATCTCTTGTTTAAACTTTAAAATAAGTGAACTTTAGATTATGTAAACAAGTGATTATAGTTTATAGGTTC TGGTGTAAAGAAGAAAGCTAAACTCAAAATGTCAAAATTTGAGATTCTAATTAAATTTGGTTAAACCCAAACAGTCAATTTTCTTCTCAAAATTATCAGA AATCTGATTATTCTGGGGTTCTGAACTTCTGATTATTGTAAATATCTTATATGTGATATTTTCAATAAAAAAATGATTTTTATAAAGACATAATCCCAAA TGGGCTCTTGATCAAACATAAAAAATGTCCAGATGAACTTCTTTTTCATTTTTAATTGTCTGTAATCAGTACTACATATGTTCTACAGGTAAGAGTATAT GCTACATAAGTTACTTGTAGGCTTTGTTGACAACCAATTGACAAATAGTTCCGTGTTCATACTGGTGGGATTATTTAGTTTGCAAGAATATTAACTAATA ATTAGTGCTTTATATGGTCAGATGTCTGGTAAGATTGCATGTGCTACTCATAAAAATCAATCTCTGCGAGCCACATGTATTCCTTTGGGTCCATCTGGAA GGGTTCACTCACTTCCTTATATTGATCCAAAGCAACCAGGTATGTAGTTTACTTGATGCCATTGTTGCATATCACCTACTATGGATATTATTGATTCTCA ATTCAATATATCCTTATTATTGTAGTTCTAGCAAGAGTTGTTTACCCATCAACAGACTAAACATTCTTATTTTCATTTCCTTAAATATTGAAATAATGGA TGGAAGTCTTTTTTTATTTATCAGAAGCTCCTAGTATTGTTTTATGGAATACCTACACTTAAACTAATTAAAAATAAATTTTCGAAGATTCTTTTTCAAT GTCCGAACTCTTAAGTAATGAATGATTGAGAGTGTAATATTAAAATTTTACACTTGGTATATAGGCTTTATGGTATTGAATATTTCCTTTTCTATACCCA GTCTTATTTTCCTGAAATCTACTTCATCGAAAGAGCTCCTTAAGTCAATTTATCATTGTTGTCTGTTGTTCTCATAAACTTGAATAAAATGATTATCTTG ATTCTCCAGATAATTTACTGGGGTTTGAACTTCATTGAAATTGGCATAATCCAGGTCTTGAGAGTGATGAGGAGATCAGAAGAGTGCCGGAGATAGGAGG TGAATTTGCTGGAACATCAGCCGCTCGCCCAGACACTGGTTCAACCATGGCTCCTGAAAGTGTTCATGGTACAAGAGAGGGTCAGAGGAAGAGAGGGAGA AACCCAGCTGACAAAGAAAGCAAGCGATTAAAGAGGTATGCATTTAATTAAGCTTTGTTTTGTTCGGCATCTACTAAAAGCCTAGTGGTACTTTCTTGTC CCTTTTCTTTGGGATAGATGTATTGAAATTTGTGATTTTGTAACTTTGGTGGGGTGTGAAAATGGAAATAGGCTACTGAGGAACAGAGTTTCAGCTCAGC AAGCAAGGGAGAGAAAAAAGGCTTACTTGAATGATTTAGAAACTAAAGTCAAAGACTTGGAGAAGAAGAATTCCGAGCTCAAAGAGAGACTATCTACTTT GCAGAATGAGAATCAAATGCTAAGACAGGTATGCTAATTTTTCAAATTCAATTACCATGTTTTCATCATCATCATAATGTTTTACATGCTATCTAAATCA TCAATATCATCATGATGTTTTACATGCTCTATGGTCTGCACCAGCTTATCGCTAGTTTGATACTACCTTTCGCTTTTCTTTCGCTTATGATATGAACCAT CATATTTCATAGTTTATGTATTATGTGTGATTGTTCTTTTGCAGATACTGAAAAACACAACAGCTACCAGGAGAGGGAGCAATAGTGGTGCCAATGCTGA ATGAACTTGATGAGAAATATGGATTACCAGATAAAGTTATAGGTATTGTAGATGTAGAGTGTGAAAGTGAGAGAGGAGAGTAAACTAGCGAGAAAGGGAA AAGTAATAGTGAAAAATTAGTTTTGATAATTCTTTAATGGTGTTTGGTTGTAATATTATGCAGTGCTTTATCCTAGGATATTGTGATGTGTGTAATATAT ATGCACTTTCCGTGTAAAGATTTATAGACGGTCACTATGTTATACACTATTCATTTGGATTAGTTTTTTTGAAGAGTTAATGATTATTAAATATGAATGC TGGATGATACAGTGTCAGTGTATAAAACTCTTTTTTTTCTCTTGTGATTTGATGTGAATTTATTCATTGTTTTACCTCAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_20452; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_194551
| Blastp | Probable cellulose synthase A catalytic subunit 10 [UDP-forming] from Arabidopsis with 52.03% of identity |
|---|---|
| Blastx | Transcription factor HY5 from Arabidopsis with 85.19% of identity |
| Eggnog | Glycosyl transferase, family 2(COG1215) |
| Kegg | Link to kegg annotations (AT2G25540) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437116.1) |
| Pfam | Zinc-binding RING-finger (PF14569.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |