Id Trinity | FTRINITY_DN50698_c0_g1_i10 |
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Name Transcript | Ll_transcript_194466 |
Sequence | AATGAATGAGTAGTTTAAGCATATGATAAACAATTTATGAAGAAAAGGACAATTTAGTTGCCCCCTACCTCATATATACAACCAGAACAACGTAAATATG TGTGCTGGCTCTTTTTGCCCTTTTTTTTATATTTGTTGAAAATGATAGCTATTCATCCGAAATAAACTAGCTTTTTATCTAAATAGTTAAAATTTCTTGA TGGTACCAATAAAACTAGAACAACATAAATATTTGTATTTGTGCTGGCTGTTTTTCTCACCTCGTTTTCCATCAATATTACAACAACTTGAAACAAGACA AGGACTTAGTCAGTGTTGAAAATTTTACACTTCTGTTTCTGGCTTTAAAATCAATCGTTGGTCCCTTTCTTTTTCTGTATCAACAAATTTGCAAAACCAA TTTTCTTTCTCAATGGGGGTTCATACTCAAACACTCTCTACCTTTGACCTTAACTCTAACCCTTCATTCCCATACTCCACCGTCAACGGCATTCACCGCC CAACTTCCCCTCTCGCCAACGACCAGCCTCTTAAAACGTCAAATGTCGAATCGCCGGAGTGCCACGCGCCGTCACGCGCGTGGCATCAGGATACCGCTGC CGTCAGGGTGCAGAAGGTGTACCGCAGTTACCGTACCCGGCGGAGGTTGGCTGATTCCGCCGTCGTCGCCGAGGAGTTATGGTGGCAAGCGATAGATTTT GTGAGGCTAAACCGTAGCACCATTTCCTTCTTCAATTTGCCGGAAACCGCTGCGTCACGCTGGGCTCGTGTTATACTCAACGCTTCCAAGGTGGGTAAGG GTTTGTCTGTTGACGCCAAAGCACAAAAGTTGGCTTTTCAACATTGGATTGAAGCTATTGATCCACGCCACCGCTACGGGCATAACCTGCATTACTACTA TGAGGAATGGTGTAAAACGGATGCTGACGAACCATTCTTTTATTGGTAAGACTAATTTACTTTAAACAAAAGCATTTTCTTCACCCCCTTTTGAAAAATT TGGGCTAAAGTTGAAGTGGATTGAGTGGGATTGGGTGTGATTTAACTTGGCAGTGCGCAAGTAAGTGAAGTTCTGTTTTCTAATGCTGTTGATACTGGCT GATTCCATTGAATTAACAGGGAAATATGGCTTGTACAGTTTACTGTGCGCACTTGTACAGTTCAGTATCTGATTAAGTGTATATCCTTTTGCATTTGATC TGTTGATTAATGCTTCTACCCTCTAACCCATAAATGCTCCCCTGAATTTCCCAAAATTCTGTTAAAAAAAATGGATTACATATTAGGTATATACAATGGT GATTTTTAATTTTGCTTCCTACCTCCTGTTTTAACAAAAAGTGCTGTCTGTCTTACAAGGTCAAGGCATAGAGTAAGAGTTTATGATGCTAAGATGAGAA CTTGCAGCTTCTTGAAATATGTTTTCTCATTTTACAGGTTGGATTTAGGAAAAGGGAAAAATCTTGATCTTGAAAAATGCCCCCGATCAAAGCTCCGGAA ACAATGCATTAAATATCTTGGACCTCAAGAGAGAGAACACTATGAATACATTGTCTGCGAGGGAAAAATTATCCACAAGTATTCAGGAGATGTTCTCCAT ACGAAGGAAGGTTCTGAAGATGCCAAGTGGATTTTTGTAATGAGCACCTCTAAGAAACTGTATGCTGGCAAGAAAAAGAAGGGATCATTCCATCATTCTT CCTTTTTAGCTGGCGGAGCTACCTTAGCTGCTGGAAGGCTGGAGGCTGAACATGGGACTCTGAAGTCCATCTCTGCATATAGTGGACACTACCGGCCATC AGACGACTCTCTTGACAGTTTCTTATCATATCTCAAGGAAAATGGTGTCCAGCTTGATGAAGTTGAGGTAAACTGGTTACTAATGGTTAGCATCAGGACA TTTCATATGCAGAATAACTCTTGTTATTATATTTCTCTGTCAACCTTGTTTCTAGAACAATTTTATGCCAAAATATGTTTCTTTTTCTTGAAGATCTTGA TACTTTATGAATTGATTGGTTGCCTCTGTTGTTGATTCAATCTTTATTATAATAATTTATTTGCTTCACTTAAAAGTTTGGTCTTGCATTTCCAAATGAT GTTTATGGTCATAGGCTCATAGCTGGAAGCCTGGAACATGTAATATTCAATTGAAATAACCCTGATTTTTCAGATATGCAACACAAAAGATGACACTGAT ATGTATGAGAATGGAAAGCTTACTGAAAAAGATACAGCATCTGAAGTGTCAATGACTGCTAAAATGTCCGAGTCTGGATTATCCGAGGAAGCTGAGAATA CCCCATCCTCAGACAAGGAAGATCTTCAACCTCGATCCGTTGGTTGTTATCAAAGGACACTATCAGGTGGTATTCCGAGCCCAAGAGCTGAGGTTCCCAA GACTGCTATATTGCAAAGAATAAATTCCAAGAAGGGTTCAAATTCGTACCAACTCGGGCATAACCTTTCCCGTAAATGGTCAACAGGAGCCGGACCGAGA ATTGGGTGTGTTGCTGACTACCCTGTAGAGCTTAGACTACAGGCCTTGGAGATAGTAAACCTTTCTCCAAGGACCCATCCCTCCCCTTCATTGGACACGC GAATGAATGGTCTTATATCACCTATAGCTTGTCCAACTCCCAAGGCTTCTGTTATTTGAACTACCTTACTGATCATTAGATCATGTTTCCTACCCAGTCT TGTGATGATTTAGGTTTTTTGAGTTGTAGGTGCTTTAGTTAATGTAATATTGTCCGTTCTCTATGTCATGTTAAATTTTTGGACTAGGTGTTATCTTATA AAAGACAATTGTACCTTATGCTTGTTTCCACAAATGCTAAGAGAACCTGAGAAGTGTTTGATGTGTGACTAATTATATTTCATGCCTTGTGCTAGATGGG TAAGCTTAAAATTGAGGTAGAGCTACTATTGTGTGGTTTGTGGCCGATGTAATTTGATATCACCACTGTCTTCCACACAGAAAGTGATAGCAATAAATGT TATTTTCAAAAGAGGCTGGTATATTCAGCAAGAAACAAAATATAAATGCAG BLAST |
Tissue | flowers |
Gene name | LI_gene_20603; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_194466
Blastp | IQ domain-containing protein IQM3 from Arabidopsis with 72.3% of identity |
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Blastx | IQ domain-containing protein IQM3 from Arabidopsis with 62.71% of identity |
Eggnog | NA(ENOG410XYBD) |
Kegg | Link to kegg annotations (AT3G52870) |
CantataDB | Link to cantataDB annotations (CNT0001189) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417633.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |