| Id Trinity | FTRINITY_DN50791_c0_g3_i4 |
|---|---|
| Name Transcript | Ll_transcript_108850 |
| Sequence | GGTTAATGGAAGTTACTAGTTGGAGAAGAGAAATAGGTTCTAATTTAGAGTTTAGAGAAAGAATGGAATTCGAGAAGAGAAAAGCAGCGAGCATAGCTTC ACTAAGGTCAATAGAATCAGACAAATCAGCGAAAGGGTCATTAGACACACCAATTATTCCTCTCATTAATACTATTAACCATAACCCTCTTTACTTCACC ACCAGCTCCTGCTCTGGCAGAATCTCAGTCCTCTCTCAACCCCTCTCTACTCTCTCTTCCAACCCTAAGAAGAAGGCACGTGGTGGCACGTGGCTATTCG TCTCACACCACCCCGCTGAACCGGACTCGCTCCTCTCCCTTCTATTCCCCTCCCCCGACTCAACTCGCCTTTCTGAGTCCGAACTCGTTTTCAGATTCGA GCCTCTCATTGTTGCTGTTGAGTGCAAAGACCTCGCTTCGGCTCAGTCCCTTGTTTCTTTAGCCATTTCTTGCGGTTTCAGAGAGTCTGGGATTACTAAT ACTAACAAGCGTTTCATTATAGCCATTCGATGTTCGATAAGGATGGAGGTACCCTTAGGTGATACTCCCAATATTATGGTTACGCCTGAGTATGTCACTT TTCTTGTTCGACTTGCCAATCACAAAATGGAAGCTAATCGTAACAGAACTGATAGGTTCCATCAAATGTTGGTGTCGTTGTCACAATCTAATGATAACAC TAATCATTTATCACCAAATCATCATGCAATAGGGATTCTACATCACCATTCTGAAGTTGAGGATGATTCTCAGCACAACGGAGACAATTATTCAGGGTCA ACTGTGGGGTTTTCTGGTTCTAGTCTTCCAATTGCCCATATCGAAATTGTTGGTGAACCAGTCGAGAAACTTTTCCTTTGGGGCCATTCAGCTTGTGCAT TGAATAATGGCAAACACAAGAAAGTTGTTGCATTTGGTGGCTTTGGAGGCATGGGGAGACATGCCAGGAGAAATGATTTGTTGCTACTGGATCCATATTC TGGCAATCTGGAAACAGTCAGCAGTTTTGGTGAAGTAGCTCCATCTCCATGCTTAGGCCATACGGCTTCCTTGGTTGGAGATCACATGTTTGTGATTGGA GGTCGGACTGGTCCTGATAAAATTTTGAATGATGTATGGGTCCTTGATACCACCAACAATTGTTGGAAGTTACTTCAATGTGGTGGCAGTGTCTTTCCTC CCAGGCATCGTCATGCTGCAGCTGTCATGGGTTCAAACATTTACGTATTTGGGGGACTAGACAATGATACTATATTTTCCTCCCTTTATATTCTTGACAC AATTAGTTTACACTGGAAAGAACTACCAGTTTCGGGGGACTGGCCATGTGCCCGCCACTCTCATGCAATGGTTGCATCTGATTCTCACATTTTTATGTTT GGCGGATACAATGGTGAGAAAGCACTTGGAGATTTGTATTCCTTTGATGTTCAGAAGGGTCAATGGCAGAAGGAAAAGACAGCTGGAAGTAACCCGCATG CTAGGTTCTCCCACTCAATTTTTGTTTATAAAAATTATCTTGGAGTTCTTGGTGGTTGTCCAATCAGACAACATTGTCAAGAGTTGTCTTTACTTGATTT GAAGCTTCATCTATGGAAGCATATTACCCTTACTTCTATAGGTAAAGATTTATTTGTACGAAGTACAGCCATTGTTATTGGAGATGATGTTGTTATAGTT GGTGGTGGTGCATCATGCTATGCATTTGGAACCAAGTTCAGTGAGCCAGCTAAACTCAGCTTGCTTCATTTAATGCATTCCTCACATGATGATCTTATGC CTGTCAAAAATCCAAGAAAGCTTATGTTTGGCCAAAATGATGGGACGAACCAGAATAAGATTGAAAGTTCTTTGGGATCCCAACTGGAACATGCGCCAAA TATATCTGAAGATGAAACTTTATCTTCAAACGATGGCTTACCTTGCATGAATGATCAAAATCAGATGATTCTGCCACATTATATTCTGCAACTAGAAAAG AAATATGCAAAATTAGGGAAGGATATGTTGAAGAAATTTGGATGGTTAGACTTAGGGAGAAAGGTGTACTGTGAAGAGGGTGGAGTACATATCTGTTTTC CTGTAATTAAAGATTTTGTTTCTTTATTTCATGAAAGGAATCACCACTTAGAAGATGTGATTGATGGAAAAAATGGAGCCCCCTTTTCAAAACCACTTAA AGGAGATGGTAAGTCGTTACATGAGATATCCTGTTCCGAAGCATTGAGTCTACTCCATGGATATGGTGCCATTTTGCTGGAAGATGAGATTGTTGAAGTA AGAAAAACTGCAAAGTCTCCTTTGAAAGTGATGATCGAAGCGGTAACGTCTTTGATTGAGCATAAAGGTCTACCAGCACAGCTTCTGGATGAACTGCCAA CAAGGTGGGATCGACTTGGAGATATTGTTATACTTCCAGCTACTTCTTTCAAGGATTCCATGTGGGATTCTATCACTGAAGAGCTTTGGACCATTGTTGC CAAATCACTTAAGGCTCATCGTCTCGCCCGCCAAGGCCCAGTTGCTGCAACTGGTACAAGAGATAGCACATTGCAGATTCTTGTCGGAGATAATGGCTGG GTCAACCATCGAGAAAACGGAATACTCTATTCTTTTGATTCTACGAAGTGCATGTTCTCATGGGGTAATCTTTCTGAGAAGCTGCGGATGGCCAAGCTGG ATTGTAAGGATGAAGTTATAGTAGATCTGTTTGCAGGCATTGGCTACTTTGTGCTGCCTTTTCTTGTCAGGGCCCAGGCAAAACTTGTATATGCTTGTGA GTGGAATCCCCATGCTTTAGAAGCTCTCCAACATAATCTGCAAGCAAATTCTGTGGCTGATCGTTGTATCTTACTTGAAGGAGATAATCGAATTATGGCT CCCAAGGTATTGTGCATGTAGTTATCCACCCATCAGCTATCGTATGTCCAAATGTTTGCTTCCTTGTAGATGTGGTTTATTCAAACCATCTAGTCCTTTT GGAAAATCATCTTAATAACTAAAAGGGAGAATTTTGGTGTGCAAAACTTGGGTAAAGATCCCTAAGTGCTTGTGGTGCTATGCTCCAATAGAAACATGAC AAGTGTATTATTCTTTACACCTCAACTATGGGAATTTTAAGAAAGGAGAAAATGAGTGTTAGACGGCTAAAGAATTTTACATGCTATATTTTTATTGGAG AACACCACAAGTGCTTATGGAACTTTATCTAGTTTTGTCCAATTTTAATTTTGGATATCTTGATCAACTTCAAATATATTTCCAATTGAGGATGATTAAC CTAAACTACTAAAAGATTCGTTAGCAATATTGTAAGACGGTTAATATGTTAATCTGATTAACCATTCATTGGCAACATTGTAATCTGATTAACCTAAACT CCTAGGTCAGAAATATGTTAATCTCACTATCCCAAATTTTAGTTCTCCCTCAATAAACCTCATTGTACACAGCATGCTAATGAAGTATGGTGAATCTTTT GTGTTAGTTAAGATAATTTACTGTTAGCTTTAGAGTTACTCACATATAAAAAATGAGCATTTTTCTAACAATATCGAAGATACTTTTTCTTCCCCTTGGA TGTTGTGCCAAGGGGAAGGAAATTGTAAAGAGGAATTTGAGTGAGGATTGTAATATTTGTATTCCTTTGTTTGGATGAAAAGATGCAGTGAAAAGGAAAT TGTAAAGAGGAGTTTGAGTGAGGATTGTAATATTTGTATTCCTTTGTTTGGATGAAAAGATGCAGTGAAAAGGAAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_20776; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_108850
| Blastp | tRNA wybutosine-synthesizing protein 2/3/4 from Arabidopsis with 57.65% of identity |
|---|---|
| Blastx | tRNA wybutosine-synthesizing protein 2/3/4 from Arabidopsis with 57.08% of identity |
| Eggnog | tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)(COG1590) |
| Kegg | Link to kegg annotations (AT4G04670) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462817.1) |
| Pfam | Methyltransferase TYW3 (PF02676.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |