Ll_transcript_108855

Id TrinityFTRINITY_DN50791_c0_g3_i6
Name TranscriptLl_transcript_108855
SequenceGGTTAATGGAAGTTACTAGTTGGAGAAGAGAAATAGGTTCTAATTTAGAGTTTAGAGAAAGAATGGAATTCGAGAAGAGAAAAGCAGCGAGCATAGCTTC ACTAAGGTCAATAGAATCAGACAAATCAGCGAAAGGGTCATTAGACACACCAATTATTCCTCTCATTAATACTATTAACCATAACCCTCTTTACTTCACC ACCAGCTCCTGCTCTGGCAGAATCTCAGTCCTCTCTCAACCCCTCTCTACTCTCTCTTCCAACCCTAAGAAGAAGGCACGTGGTGGCACGTGGCTATTCG TCTCACACCACCCCGCTGAACCGGACTCGCTCCTCTCCCTTCTATTCCCCTCCCCCGACTCAACTCGCCTTTCTGAGTCCGAACTCGTTTTCAGATTCGA GCCTCTCATTGTTGCTGTTGAGTGCAAAGACCTCGCTTCGGCTCAGTCCCTTGTTTCTTTAGCCATTTCTTGCGGTTTCAGAGAGTCTGGGATTACTAAT ACTAACAAGCGTTTCATTATAGCCATTCGATGTTCGATAAGGATGGAGGTACCCTTAGGTGATACTCCCAATATTATGGTTACGCCTGAGTATGTCACTT TTCTTGTTCGACTTGCCAATCACAAAATGGAAGCTAATCGTAACAGAACTGATAGGTTCCATCAAATGTTGGTGTCGTTGTCACAATCTAATGATAACAC TAATCATTTATCACCAAATCATCATGCAATAGGGATTCTACATCACCATTCTGAAGTTGAGGATGATTCTCAGCACAACGGAGACAATTATTCAGGACAA CTTTCCTTTTAATATCAATCAAAAGTCTGAATCTTTCAATGGTTGGCTGGCAGGGTCAACTGTGGGGTTTTCTGGTTCTAGTCTTCCAATTGCCCATATC GAAATTGTTGGTGAACCAGTCGAGAAACTTTTCCTTTGGGGCCATTCAGCTTGTGCATTGAATAATGGCAAACACAAGAAAGTTGTTGCATTTGGTGGCT TTGGAGGCATGGGGAGACATGCCAGGAGAAATGATTTGTTGCTACTGGATCCATATTCTGGCAATCTGGAAACAGTCAGCAGTTTTGGTGAAGTAGCTCC ATCTCCATGCTTAGGCCATACGGCTTCCTTGGTTGGAGATCACATGTTTGTGATTGGAGGTCGGACTGGTCCTGATAAAATTTTGAATGATGTATGGGTC CTTGATACCACCAACAATTGTTGGAAGTTACTTCAATGTGGTGGCAGTGTCTTTCCTCCCAGGCATCGTCATGCTGCAGCTGTCATGGGTTCAAACATTT ACGTATTTGGGGGACTAGACAATGATACTATATTTTCCTCCCTTTATATTCTTGACACAATTAGTTTACACTGGAAAGAACTACCAGTTTCGGGGGACTG GCCATGTGCCCGCCACTCTCATGCAATGGTTGCATCTGATTCTCACATTTTTATGTTTGGCGGATACAATGGTGAGAAAGCACTTGGAGATTTGTATTCC TTTGATGTTCAGAAGGGTCAATGGCAGAAGGAAAAGACAGCTGGAAGTAACCCGCATGCTAGGTTCTCCCACTCAATTTTTGTTTATAAAAATTATCTTG GAGTTCTTGGTGGTTGTCCAATCAGACAACATTGTCAAGAGTTGTCTTTACTTGATTTGAAGCTTCATCTATGGAAGCATATTACCCTTACTTCTATAGG TAAAGATTTATTTGTACGAAGTACAGCCATTGTTATTGGAGATGATGTTGTTATAGTTGGTGGTGGTGCATCATGCTATGCATTTGGAACCAAGTTCAGT GAGCCAGCTAAACTCAGCTTGCTTCATTTAATGCATTCCTCACATGATGATCTTATGCCTGTCAAAAATCCAAGAAAGCTTATGTTTGGCCAAAATGATG GGACGAACCAGAATAAGATTGAAAGTTCTTTGGGATCCCAACTGGAACATGCGCCAAATATATCTGAAGATGAAACTTTATCTTCAAACGATGGCTTACC TTGCATGAATGATCAAAATCAGATGATTCTGCCACATTATATTCTGCAACTAGAAAAGAAATATGCAAAATTAGGGAAGGATATGTTGAAGAAATTTGGA TGGTTAGACTTAGGGAGAAAGGTGTACTGTGAAGAGGGTGGAGTACATATCTGTTTTCCTGTAATTAAAGATTTTGTTTCTTTATTTCATGAAAGGAATC ACCACTTAGAAGATGTGATTGATGGAAAAAATGGAGCCCCCTTTTCAAAACCACTTAAAGGAGATGGTAAGTCGTTACATGAGATATCCTGTTCCGAAGC ATTGAGTCTACTCCATGGATATGGTGCCATTTTGCTGGAAGATGAGATTGTTGAAGTAAGAAAAACTGCAAAGTCTCCTTTGAAAGTGATGATCGAAGCG GTAACGTCTTTGATTGAGCATAAAGGTCTACCAGCACAGCTTCTGGATGAACTGCCAACAAGGTGGGATCGACTTGGAGATATTGTTATACTTCCAGCTA CTTCTTTCAAGGATTCCATGTGGGATTCTATCACTGAAGAGCTTTGGACCATTGTTGCCAAATCACTTAAGGCTCATCGTCTCGCCCGCCAAGGCCCAGT TGCTGCAACTGGTACAAGAGATAGCACATTGCAGATTCTTGTCGGAGATAATGGCTGGGTCAACCATCGAGAAAACGGAATACTCTATTCTTTTGATTCT ACGAAGTGCATGTTCTCATGGGGTAATCTTTCTGAGAAGCTGCGGATGGCCAAGCTGGATTGTAAGGATGAAGTTATAGTAGATCTGTTTGCAGGCATTG GCTACTTTGTGCTGCCTTTTCTTGTCAGGGCCCAGGCAAAACTTGTATATGCTTGTGAGTGGAATCCCCATGCTTTAGAAGCTCTCCAACATAATCTGCA AGCAAATTCTGTGGCTGATCGTTGTATCTTACTTGAAGGAGATAATCGAATTATGGCTCCCAAGGTATTGTGCATGTAGTTATCCACCCATCAGCTATCG TATGTCCAAATGTTTGCTTCCTTGTAGATGTGGTTTATTCAAACCATCTAGTCCTTTTGGAAAATCATCTTAATAACTAAAAGGGAGAATTTTGGTGTGC AAAACTTGGGTAAAGATCCCTAAGTGCTTGTGGTGCTATGCTCCAATAGAAACATGACAAGTGTATTATTCTTTACACCTCAACTATGGGAATTTTAAGA AAGGAGAAAATGAGTGTTAGACGGCTAAAGAATTTTACATGCTATATTTTTATTGGAGAACACCACAAGTGCTTATGGAACTTTATCTAGTTTTGTCCAA TTTTAATTTTGGATATCTTGATCAACTTCAAATATATTTCCAATTGAGGATGATTAACCTAAACTACTAAAAGATTCGTTAGCAATATTGTAAGACGGTT AATATGTTAATCTGATTAACCATTCATTGGCAACATTGTAATCTGATTAACCTAAACTCCTAGGTCAGAAATATGTTAATCTCACTATCCCAAATTTTAG TTCTCCCTCAATAAACCTCATTGTACACAGCATGCTAATGAAGTATGGTGAATCTTTTGTGTTAGTTAAGATAATTTACTGTTAGCTTTAGAGTTACTCA CATATAAAAAATGAGCATTTTTCTAACAATATCGAAGATACTTTTTCTTCCCCTTGGATGTTGTGCCAAGGGGAAGGAAATTGTAAAGAGGAATTTGAGT GAGGATTGTAATATTTGTATTCCTTTGTTTGGATGAAAAGATGCAGTGAAAAGGAAATTGTAAAGAGGAGTTTGAGTGAGGATTGTAATATTTGTATTCC TTTGTTTGGATGAAAAGATGCAGTGAAAAGGAAAT BLAST
Tissueflowers
Gene nameLI_gene_20776; 
Additional informationdetails; 

Expression of Ll_transcript_108855

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_108855

BlastptRNA wybutosine-synthesizing protein 2/3/4 from Arabidopsis with 57.43% of identity
BlastxtRNA wybutosine-synthesizing protein 2/3/4 from Arabidopsis with 57.57% of identity
EggnogtRNA-yW synthesizing protein 3 homolog (S. cerevisiae)(COG1590)
KeggLink to kegg annotations (AT4G04670)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019462817.1)
PfamKelch motif (PF13854.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;