Ll_transcript_108857

• Id Trinity: FTRINITY_DN50791_c0_g3_i7
• Name Transcript: Ll_transcript_108857
• Sequence: GGTTAATGGAAGTTACTAGTTGGAGAAGAGAAATAGGTTCTAATTTAGAGTTTAGAGAAAGAATGGAATTCGAGAAGAGAAAAGCAGCGAGCATAGCTTC ACTAAGGTCAATAGAATCAGACAAATCAGCGAAAGGGTCATTAGACACACCAATTATTCCTCTCATTAATACTATTAACCATAACCCTCTTTACTTCACC ACCAGCTCCTGCTCTGGCAGAATCTCAGTCCTCTCTCAACCCCTCTCTACTCTCTCTTCCAACCCTAAGAAGAAGGCACGTGGTGGCACGTGGCTATTCG TCTCACACCACCCCGCTGAACCGGACTCGCTCCTCTCCCTTCTATTCCCCTCCCCCGACTCAACTCGCCTTTCTGAGTCCGAACTCGTTTTCAGATTCGA GCCTCTCATTGTTGCTGTTGAGTGCAAAGACCTCGCTTCGGCTCAGTCCCTTGTTTCTTTAGCCATTTCTTGCGGTTTCAGAGAGTCTGGGATTACTAAT ACTAACAAGCGTTTCATTATAGCCATTCGATGTTCGATAAGGATGGAGGTACCCTTAGGTGATACTCCCAATATTATGGTTACGCCTGAGTATGTCACTT TTCTTGTTCGACTTGCCAATCACAAAATGGAAGCTAATCGTAACAGAACTGATAGGTTCCATCAAATGTTGGTGTCGTTGTCACAATCTAATGATAACAC TAATCATTTATCACCAAATCATCATGCAATAGGGATTCTACATCACCATTCTGAAGTTGAGGATGATTCTCAGCACAACGGAGACAATTATTCAGGGTCA ACTGTGGGGTTTTCTGGTTCTAGTCTTCCAATTGCCCATATCGAAATTGTTGGTGAACCAGTCGAGAAACTTTTCCTTTGGGGCCATTCAGCTTGTGCAT TGAATAATGGCAAACACAAGAAAGTTGTTGCATTTGGTGGCTTTGGAGGCATGGGGAGACATGCCAGGAGAAATGATTTGTTGCTACTGGATCCATATTC TGGCAATCTGGAAACAGTCAGCAGTTTTGGTGAAGTAGCTCCATCTCCATGCTTAGGCCATACGGCTTCCTTGGTTGGAGATCACATGTTTGTGATTGGA GGTCGGACTGGTCCTGATAAAATTTTGAATGATGTATGGGTCCTTGATACCACCAACAATTGTTGGAAGTTACTTCAATGTGGTGGCAGTGTCTTTCCTC CCAGGCATCGTCATGCTGCAGCTGTCATGGGTTCAAACATTTACGTATTTGGGGGACTAGACAATGATACTATATTTTCCTCCCTTTATATTCTTGACAC AATTAGTTTACACTGGAAAGAACTACCAGTTTCGGGGGACTGGCCATGTGCCCGCCACTCTCATGCAATGGTTGCATCTGATTCTCACATTTTTATGTTT GGCGGATACAATGGTGAGAAAGCACTTGGAGATTTGTATTCCTTTGATGTTCAGAAGGGTCAATGGCAGAAGGAAAAGACAGCTGGAAGTAACCCGCATG CTAGGTTCTCCCACTCAATTTTTGTTTATAAAAATTATCTTGGAGTTCTTGGTGGTTGTCCAATCAGACAACATTGTCAAGAGTTGTCTTTACTTGATTT GAAGCTTCATCTATGGAAGCATATTACCCTTACTTCTATAGGTAAAGATTTATTTGTACGAAGTACAGCCATTGTTATTGGAGATGATGTTGTTATAGTT GGTGGTGGTGCATCATGCTATGCATTTGGAACCAAGTTCAGTGAGCCAGCTAAACTCAGCTTGCTTCATTTAATGCATTCCTCACATGATGATCTTATGC CTGTCAAAAATCCAAGAAAGCTTATGTTTGGCCAAAATGATGGGACGAACCAGAATAAGATTGAAAGTTCTTTGGGATCCCAACTGGAACATGCGCCAAA TATATCTGAAGATGAAACTTTATCTTCAAACGATGGCTTACCTTGCATGAATGATCAAAATCAGATGATTCTGCCACATTATATTCTGCAACTAGAAAAG AAATATGCAAAATTAGGGAAGGATATGTTGAAGAAATTTGGATGGTTAGACTTAGGGAGAAAGGTGTACTGTGAAGAGGGTGGAGTACATATCTGTTTTC CTGTAATTAAAGATTTTGTTTCTTTATTTCATGAAAGGAATCACCACTTAGAAGATGTGATTGATGGAAAAAATGGAGCCCCCTTTTCAAAACCACTTAA AGGAGATGGTAAGTCGTTACATGAGATATCCTGTTCCGAAGCATTGAGTCTACTCCATGGATATGGTGCCATTTTGCTGGAAGATGAGATTGTTGAAGTA AGAAAAACTGCAAAGTCTCCTTTGAAAGTGATGATCGAAGCGGTAACGTCTTTGATTGAGCATAAAGGTCTACCAGCACAGCTTCTGGATGAACTGCCAA CAAGGTGGGATCGACTTGGAGATATTGTTATACTTCCAGCTACTTCTTTCAAGGATTCCATGTGGGATTCTATCACTGAAGAGCTTTGGACCATTGTTGC CAAATCACTTAAGGCTCATCGTCTCGCCCGCCAAGGCCCAGTTGCTGCAACTGGTACAAGAGATAGCACATTGCAGATTCTTGTCGGAGATAATGGCTGG GTCAACCATCGAGAAAACGGAATACTCTATTCTTTTGATTCTACGAAGTGCATGTTCTCATGGGGTAATCTTTCTGAGAAGCTGCGGATGGCCAAGCTGG ATTGTAAGGATGAAGTTATAGTAGATCTGTTTGCAGGCATTGGCTACTTTGTGCTGCCTTTTCTTGTCAGGGCCCAGGCAAAACTTGTATATGCTTGTGA GTGGAATCCCCATGCTTTAGAAGCTCTCCAACATAATCTGCAAGCAAATTCTGTGGCTGATCGTTGTATCTTACTTGAAGGAGATAATCGAATTATGGCT CCCAAGAATGTGGCTGATAGAGTCTGTCTGGGTCTCATTCCATCTAGTGAGAGTAGCTGGGTCACAGCTGTGAGGGCTTTAAGGATAGAGGGTGGAATAT TACATGTCCATGGGAATACAAAGGACTCTGAGGAGCCTGAATGGATTGATCATGTATCAAGTTCAATATATGAAATTGCTAAATCTGAAGGTTATTGTTG GGAGGTTTCTATAGAACATGTTGAGAGGGTGAAATGGTATGCTCCTCATATTCGCCATGTTGTTGCTGATGTAAGATGCAGACACATCCAAAGATAGTGA AAAGAATGGCATTTGATGTTGTTAACAATAATGAATGTCATTAAGAACTTGTCAAGATCTTAAATGAGAGCTACCTTTGTACCATTGGCCAATTTAAATG CAGAGTTTGGATTTCAGACGGTTCCGAGAATCGGATTCAATCATTGATGATGGAGAGGTGATGATGAACACTTCAATGGCAAACTTGTGTCTCAATCCAA ATACTGCATACTACATTGTATCTGGCGTGTTTTGTGCTATAATACAGTTTGATGTATAATGTTTTCCAATTTGGGGAGGGCTTGTGCACAGTGAATTTTA TTACATGAAACATGTCAAATTTTTGTTTGCTATTTATTTAGGCTGCAATTGAAGTCTATTTGATATGTGAGACAAAAAAGAAGAAATTGATGTGAAAACA ATCATTTAACTTTTCTGAATAACGATATTGTAGTGAATTTCCAAA
• Tissue: flowers
• Gene name: LI_gene_20776;
• Additional information: details;

Expression of Ll_transcript_108857

FPKM

• FPAB: 2.4
• FPNAB: 7.6
• LF1: 5.8
• LF2: 6
• LF3: 5.6
• LF4: 4.2
• UF1: 4.2
• UF2: 6
• UF3: 5.8
• UF4: 4.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_108857

• Blastp: tRNA wybutosine-synthesizing protein 2/3/4 from Arabidopsis with 58.7% of identity
• Blastx: tRNA wybutosine-synthesizing protein 2/3/4 from Arabidopsis with 58.19% of identity
• Eggnog: tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)(COG1590)
• Kegg: Link to kegg annotations (AT4G04670)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462817.1)
• Pfam: Methyltransferase TYW3 (PF02676.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;