Id Trinity | FTRINITY_DN50818_c0_g1_i2 |
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Name Transcript | Ll_transcript_261037 |
Sequence | CATTTTGCGTGTTTTATCCACTAGTTTAAAAGCTCTTAAATCTTGTTGCAGCAAATATACTCATATCCCCTCCAATCGAATCAATCAAACACAGTTTGGT GCTTTGAATCAATCAAACACACTTCAACCCTCACACTGGAATATGGCAACCCAAAACTCCCAAATCTATCACGAAAACCAAAGTTTACAGTTTTGTCTCC TTCATACTCTCAATTCCCTCTTTCAGCAAAAGGATGCATTTAATAGAGCTACCTTGAATTCAATTTCTGAAAAACTTGCACTTGATGACAACTCCAACAC TGACACATGGACACCACTGTCTCTTATTTTCAAGCCCCATCATAATGTTTTGACTGGAAACTATGATGTTAATGTTCTAATTGCGGCTTTGGAAGACAGA GGAAAGAGTGTGATCTGGCATGATCGTCGAAACGGAGTCTCCTCCATTGATCTTGATGCACCACAAGATGTTCTGATGGGGATTGTGCTCAATGTCCCTG TTAGAAGATTTGCTGGGATTTGGAAAAGCAGGCATTGGGTTGCACTGAGGAAGATTGATGGTGTTTGGTATAACTTGGATAGTGATCTTCATGCTCCTCA ACGTTTTCGAGATATACAAAAAGTTAGGGAGTTTTTGGGTTCTACCATTGGTCATGGAGGGGAGGTTCTGCTTGTCATGAATCAAAAACAGTAATGTTTG CTTGCTATATAATATATGTCTTCTTGATTATTTGGATCAAAATTTGTGCATGTCCATGTGTATATATAGTACAGAGTAAACCCTTGATTCAATCCTCGAA AGATTATGGTGTCGCCGAAGAGGCACTTAAAAGTTTTTCTTCACCAATTGGTTACATTGGTCTTTCTAAGAACTTAATTGGTAACAACAAAAATAATCAC TTTAAAGGTGTTTCAAACCTTTCAAGTACCTAATTGGTTATAAAAAAACTTTATATCTCCAGCTACATTGTAATCTTTTTATGACCAAATTGTTAGTTTA CCCTTGAGTTTATAGTACATGATTGATAGTGTTTTGTTGGAGAGTGCAGTCATGTTCATCCTTAGGTCTCTAATATCTCTTTGTTTCATTGTTTTGTGAA TAATTTCTTTTGGAGGGATGTTCATTATAAGAAATATGGTCTTGTCTGTAACACACTTATGAAATGAAAGCTTCACCTTGTTTCTTGGATCTTCAATGCA CCTTTGAACCATTACCTGCTGTGTGAGCTGAAATTTGAATCTGAATGGAATTGGAAGTGATATTTGATGACTATTTGGGGCAAGAACTGAGATATTCTTT CAGTGAGATTTCTCAGGGGTATTGGTTATCTCAGTGTGAAGGGGGCACTGTGGCCATTGTTCCCTAGTTGCCGATCTCATCACTGTCATTAGCTTTTCCC AATGCTTAAATTAACAACTTGAACTTATCTGTTTGTCCAAACCTGGTCTCTGCCATAGCCTTTGGCTTGTCTACTTCTTTGCTACACTCACTAGAGACCA ACTTGAGGGAATGAAAAAGATAAGTAATGAGTCCTTCAAGAATTATATGCCCAAAGATGGAGAGCCTTAGCAGCTCGAGTCGGACCACCAATGCTACATT CCGGATGTGCTCATACTTTATCTGCACCTTCAAGAACATGCTCTGAGCCCATGTTTAGGAGACGGATGAACGCAATCCAGCCATGATATCATTATGAACC TACCTTTTAACCAATACACGCCATCTTATCATTAACCTCCTTGACCATTTCATCCCCAACCCTACCAAATCAAAAGCTATTAATTGAGTATAATTTTCTC TATTTGAAATTGCAAGAAACTTGTGTGTTATATTGGTGTTCATTTAAAAAAACTTGTAAACTTCATAGATTAGAGTTACTGAGGAAGATCCTGCTAAAGG ATTCATGTGATGTGGTGGTTTTGTGGCTGGGTAACCACTTAAGACATTTTGTTTAATCACCCATGTTGTAAGCTGCATATGTATCTTCAATCACTCTTTA CGGCTGCAACTTGTAAAAAACATTTTGC BLAST |
Tissue | flowers |
Gene name | LI_gene_20829; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_261037
Blastp | Josephin-like protein from Arabidopsis with 67.88% of identity |
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Blastx | Josephin-like protein from Arabidopsis with 67.88% of identity |
Eggnog | Josephin domain containing(ENOG4111I4J) |
Kegg | Link to kegg annotations (AT2G29640) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431779.1) |
Pfam | Josephin (PF02099.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |