| Id Trinity | FTRINITY_DN50861_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_261348 |
| Sequence | CTGAAGTCCAAAATCCAATCCATAACGAGTGACTCGGGAGACTCAGTGATGCAACTCAGCAGCAACCTGTTATCAATTAAACCGTCACCACCACCACCAC CGAGTCCAAAACCGTCATTATTCAAACCCATCTTCTGCTTTCCCAACTCGGCCGAGTCAAACTCACTCGAATTCGAGACCCTACAATGGAGTTCCATATG CAACCAACTCTCTTCCTTCACCTCAACCTCCATGGCTTCTTCTACAGCACAAAATGCAACATTACCAATAGGCCGAACCCTCCACGAGAGTCAGAAGCTT CTCGATCAGACTTCTGCGGCAAGGTTAGTCGCTCACCCCATGGATTTCTCCGGAATCGATGATTTATCGGAGATTCTTGCTCTTGCTGCTTCCGGTCAAT TGCTAACGATCCGGGAACTTTGTACCGTTCGACGCACGCTTCGAGCTTCAAGGGAACTGTTCCAGAAGCTCAATGAATTGGCTTCCAACTATAGTCATCC ACAAAGGTATTGTGTTTTTCTTGACAAAGTTTGGAGCATAGATCATATGGTTTTGGATTCTCATGTCCCAATAAGGCTTTAAAAGAAAGTATATCTCAAA GGTACTTACCCCTTCTCGAAATACTGCAAAATTGTAACTTTCAAGTGGGGTTGGAGCGTAAAATTGAATTTTGCATCGATTGCAATCTTTCAGTAATTCT TGATAGAGCAAGTGAAGACCTGGAGATCATTAGATCAGAAAGAAAGAGAAACATAGAAATTCTGGATTCTTTGTTGAAGGAAGTATCATCTCAAATTTTT CAGGCAGGGGGCATTGACAGACCATTAATAACAAAGCGTCGGTCTAGAATGTGTGTGGGTATTAGGGCTTCCCATAGATATTTGCTTCCAGATGGTATAA TTCTGAATGTTAGCAGTTCTGGAGCAACATACTTTATGGAACCCAAAGATGCTATAGATCTAAACAACATGGAAGTTAGGCTTTCAAACTCTGAGAAGGC TGAAGAAAGAGCAATTTTAAGTTTGCTTGCATCTGAAATAGCAAATTCAGAACGGGAGATAAACTATTTATTGGATAAAATCCTTGAGGTTGATCTTGCT TTTGCAAGAGCTGCATATGCTCAATGGATGAATGCAGTGTGCCCAATTTTCAGTTTAGGTAATTCTGAAGGCTGTGATTCTGTTGAAGAGGATGATGATT TAGCGGTAAATATTGGTGGTATGCGTCATCCATTACTTCTGGAGTCTTCTCTAGAAAAAATTCCAAAGAATGTTGCATTAAAATCCAGAAATGCCACTGA GTCGGGTAATGGAAATGGAGCAGTGGCTTCTAAAAATGTTTTTCAAGGCATACCAGACTTCCCTGTGCCTGTTGATTTTAAAATTAGACACGGAACCAGA GTGGTGGTGATCTCAGGTCCTAATACAGGAGGGAAAACTGCTTCCATGAAAACATTGGGCCTAGCATCACTTATGTCAAAGGCTGGAATGCATTTGCCTG CCAAAAACCATCCAAAACTTCCTTGGTTTGATCTTATCCTGGCAGATATTGGAGATCACCAGTCCCTAGAACAAAATCTCTCAACCTTTAGTGGGCACAT CTCACGTATCTGTAAGATTTTGGAAGTTGCCTCAAAACAATCACTTGTTCTAATTGATGAAATTGGCAGTGGAACTGATCCTTCAGAAGGTGTAGCTCTT TCTGCCAGTATCTTGCAATATCTTAAAGATCATGTTAACTTGGCCGTTGTGACTACTCATTATGCTGATCTAAGTAGAATGAAGGAAAAGGATACCCGTT TTGACAATGCAGCTATGGAATTTTCTCTTGAAACATTACAGCCAACCTATAGGGTCTTATGGGGATGCACTGGTGATTCAAATGCATTGAGCATAGCACA GTCCATTGGATTTGATAGAAATATAATTCATCGTGCACAAGAATGGGTGGAGAAGTTAAAACCAGAGCAGCAGCAAGAGCGGAGAGGAATGCTCTATCAG TCATTACAGGGGGAAAGAAACAGATTAAAGGCTCAGACTGAAAGGGCTGCATCCATTCATGTTGAAATTATGAACATATACTATGAGATCCAAGCGGAGG CAGAAGATCTTGATAGACGTGAGGTGGAACTTATGGCAAAGGAAACCCAACAGGTCCAACAAGAGCTAGAAGATGCAAAATCTCAGATAGAAACCGTGAT ACAGGAGTTTGAAAAGCTACTCACAGTTTCTGGTCGCGATCAACTCAATTCACTTATTAGAGAATCCGAATCTGCAATTGCCTCCATTGTAAAAGCTCAT ACACCTGCTGTTAAATATCCCATTAATGAAGCTGATCAGGCTTCATATACTCCACAATTTGGAGAGCAAGTCCTTGTCAAGGGTTTGGGAGGGAAATTAG CCACAGTGTTAGAGTCGCCTGCAGATGACGAGACAATCCTGGTACAGTATGGTAAAGTGAAAGCCCGTGTGAAGAAAAGTAGTATCAGAGCTATTCCATC TAGTGCAAAGAATGTTGTACCTAGTTCTTCTACACATCGGCAGGGGCAGGTATGTGTTAAGAAGTATCCATCTTTGCAATCATGTGAATGTTTGATTGAT ATAATTTACCTATGTGAAGTGTGAACATTGGGAAAAATAGCTGAGTCAAGACCTGCCGTAAATCTTGTTTATAACTTCAGATCATCCTATGATCTAGGCA CATTGAAGTTTTCATCTATAAATTATTCATCCTCTCCTTTTTAACAGGTTTTTTTAACTTGATGCAGTTAATTCTAAATTTCACCTTTGTCCATCGCTTG TATATTTTGCACCTCCTATTGAATTAAGTAATTTCAGATCCAGACATTGTTTCTGAGTTCTGATGACTTTTTTTATCAGCATAGACTATATAACCTGTTT GAAGAATAATCCCTTTTTTATCAATTATTTGTTCTTACATTATCCAACACCAAGATCTATATTTGAAGAAGAAGTAAGAAATTGTTCAAAGGATGATAAT CATTAGTGTTTCATTCAAAATAATATGAATTTTTAACATCTGTTTTAACATTGTAGAATCTGCAAAATAGAGAATACCGGGAAAATTTGGAGACTGAGCT TTCTTATGGTCCAGTGGTTCAGACATCTAAGAATACGGTGGACCTACGCGGTATGCGAGTGGAAGAAGCATCTATCAACCTTGAGATGGCAATTAATGCA AGCCGGCCATATTCAGTTCTCTTCATCATACATGGGATGGGCACTGGTGCTATTAAGGAGCGTGCACTTGAGATTCTGAGAAATCATGCTCGTGTTACTA ATTATGAACCAGAAAATCCAATGAATTATGGTTGTACCATTGCTTATGTCAAGTGAACCATCATTTTCCTGGTGCAGTAAGCTATGCCATTGCAAGCTTG TGCCCTTTTTGTTGCTACTTTTTTACTTTTCCTGTTCCCTCATTACCTGATGAATACGTACACAAACTCATTTCAAACCCAGTTTGTAAGATTTAGTAGT TTTAATTTGATTTTTTCGTTGAAGTTCTAGTTTGCATTTTATTCGTCCTTTATTTTGTTCATACATAGTATATGGAGAATTCTTCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_20923; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_261348
| Blastp | Endonuclease MutS2 from Synechocystis with 32.47% of identity |
|---|---|
| Blastx | Endonuclease MutS2 from Synechocystis with 32.02% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (sll1772) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421908.1) |
| Pfam | MutS domain V (PF00488.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |