| Id Trinity | FTRINITY_DN50871_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_261265 |
| Sequence | GTTCGAATCAAATCCAAGTTAGTTAAAGAGAATGATGTATAGTTCCTGTAGTAGTAGTAGTAGTATGACACTGTCAATGACAATGATTCGTCGTCGTTTT TGCTCTTTACATAATTACAGTGTCACTTCATCGTCTTCTATCACAAACACGAAGAAGAAGAGTGTTGTTGTATTGGGGGCACCGAAAGTGTCAGCAATAG TGCTTGAAGCGTTATTGAAAGCACAATCACAATCTAATTCGTTATTTGAGGTATCAGGTATTGTTACTCAACCACCTTCTAAGAGGGACAGAGGTAAAGT ACTAATGCCTACTCCATTGGCTCAATTTGCTATTCAAAATGGGTTTGATTCTGACCTCATTTTCACTCCCCAACGTGCTGGAGATGATGATTTCTTGTCT CAATTCAAAGCTTTACAACCTGACCTATGTGTTACAGCTGCGTATGGCAATATATTGCCGAACAAGTTTCTTCAACTTCCACCTTTGGGAACAGTTAATA TTCACCCTAGTCTGTTGCCAATGTATCGTGGTGCTGCTCCTGTTCAAAGAGCATTGCAGGATGGTGTTAAAGAAACTGGTGTATCACTAGCATTTACTGT TCGTGCACTGGATGCTGGACCTGTCATTGCTACTGAATCTGTTCAAGTTGATGATCAAATAAAGGTATGATTTTCTGTTGTCGCTGTATGCTTCAAACAT GTAATGTGATTGCATGAAATTTTTGCTCTAAAAAGACTAATGCTCGTGTATTTGTCTTTCCCTCGAGTTGTTAACCAAATTTGGAATGTTTTAACAATTG GTTTGAATGATGCATATTATATGAACTTATGAAAGGCTATACCCTCTTTGATTATGCTAATATTTTCATAATATTTTCGATTTATAATCAGAACATCCAG TACATTTGTTTGAACCTGTTCTCACCATATCTCTCAACTTTCTCGGTGAAACTTACAAGTCATTAGTTCCTTCTCTCCCTGCTTCTGACAAATCTTTAGA TATCTATGTAGGCACCTGATTTGCTTGATCTCCTATTTTATAAGGGATCTGAGCTTCTGATTGGAGAACTTCCTTCTATTTTTGATGGATCAGCGAGAGT TAAGGCATGCCCTCAAGATGATTCTAAGGCTACATTAGCTCCAAAGATAAGTCAAGAGGAATCATGGCTGCTTTTTTATCAAGAAGCACCGGTTCTACAT AACAAGGTAAACTTCATGATCTTGCCTGAAATGTACAGTTGAGGCATAAAACACTTTCAGGTTCGTGCTTTTTCAGGGTGGCCAGGAACTAGAGCAAAAG TTTTGGTAGTTGAGAAAAATGGGCAGCAGAAAACCTTGGAGATTAAAATTATTACCACAAGAGTTAGTAGTCATGGAAGTGTACAATCCAATGAAGCAAA TGACATTTCATTTGTTGAGGGTGCATTGGTGTTTCCATGTGGAGGGGGCTCCATACTTGAGGTATTGGAAGTTCAGCTTCCAGGTAAAAAGGTAGTGAGC GCAGCTGCTTTCTGGAATGGGTTGCAAGGGAAGAAGATTAAGACATTATGAGAGGTGGTTTATCAGACCGAAAATTTTAAAATCTTGTTCTGGCTGTTCA GGCAATTGATTATTTGTTTTGATTCAAGTTTTTTGTTTTTTAGTTCATTTTGTATGATTTATGTTATTATGTATCACTAATTACCAACTTTTGTAATTCT ATTTAGGAAAAAAAAAGCTTATCAGACAAGCATATTTTTATTTTTATCTGCTGTTCGCATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_20942; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_261265
| Blastp | Methionyl-tRNA formyltransferase from Dictyoglomus with 39.64% of identity |
|---|---|
| Blastx | Methionyl-tRNA formyltransferase from Dictyoglomus with 39.76% of identity |
| Eggnog | Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP (By similarity)(COG0223) |
| Kegg | Link to kegg annotations (DICTH_1334) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449712.1) |
| Pfam | Formyl transferase (PF00551.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |