| Id Trinity | FTRINITY_DN50879_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_261018 |
| Sequence | TAATAATAAAAGGCCCAATAATTTGATATTCAAATGAATCAATCCTATCCAATTGAATTGAGGATTTGAATCCGCCATGGCTGCAACTCCATTCCTTATT CTTCAACCACGTTTCAACTCCTACATCAACCCTCTCTTTCGTTCACTCTCTTCTTCACCTCTCTCATTCAATGCCGCCACTGCAATTCAATCCTCTCTCT CTCCACCCTCCGATACTCATTCCTCCACCGCCGCCGGTAGGTCAGGCGCGTTATCTCCCGCTCCGCCTCTCTCCGGCGCCGTGCAGAAGATCGACGTGAA TCCTCCCAAAGGAACGCGTGATTTCCCGCCAGAAGATATGCGATTGCGTAACTGGCTCTTCAATAATTTCAGAGAGGTTTCGCGGTTGTATGCGTTTGAG GAGGTTGATTTTCCGGTGCTTGAAAATGAGGCATTGTTCACTAGGAAAGCAGGGGAGGAGATTAAGGATCAGCTTTATTGTTTTGAAGATCAGGGTAAAC GTCGTGTTGCACTGAGGCCTGAGCTTACTCCTTCTCTGGCAAGGCTGGTGATACAGAAAGGGAAGTCTGTGTCACTACCATTGAAGTGGTTCACTGTTGG GCAATGTTGGCGGTATGAGAGAATGACAAGAGGGCGTCGTCGTGAGCACTATCAGTGGAATATGGACATCATTGGCGTTCCTGGGGTTATGGCTGAAGCA GAGCTTATAGCCTCTATTGTCACATTGTTCAAGCGAATAGGAATTACAGAATCAGATGTTGGATTTAAGGTTTCCAGTCGAAAGGTGCAGACTCTATTTT CTTCATATGAATGATGTACCTACATCCTTCCATACTGTTGTTTGTATTGCATTTTCTAGAGTTATGTACTTTTAAGGGTTTCCATTGATTTATATTCTCA AATACAGTCCCAAGAGTCAGTTCAATTGGTAGAGTTGTTGAACATTAAGCATGATGTATGGGTTCCAACCCCGACAGAAGCACTCTCCCCCCTCCCGTTA AAAATATTTGTCTCTAAAACGGAAAATATTATTCAAAACGTCTGCTGCTAAAAACTGTCTGTTTTGCTGGGTGATGAGAGGGATTCAGTTTCAACACGAG TATTTATAGATTAAATTTTCAAAGCTTGGTTTAGTTGACTTGGCTTGGTTTATTAGGACTAATGACCCATGAGTGCAATAGACCTATACGGCTATGACAA TAGTTTATTATAATGTAAGTCCTTACTATGCTTGTGTTTTTTAGATTTTAGAATTCTTTTTACACCATGCTCCTTTTCTTCATGTAATGACATGATTAAT TTAGAATATGTGAAGTTTTATTCATGTAGTTTGTGTTACTCTTCATTGTGTTAACCACAGTTTTTGCCTGTAGCTTGTTTCACCTCTGTAGGTAAGCACA TTCTGCAATAAACAGCATCAATCCTGACTTTTTTAACTTATCTACTTGGTTCTTAGGTACCACTTTGGTTTTATGATTTCCTTTCTCTCTTTTACAGGTT TTACAGGGAGTATTAAAGTGTTATTCCATACCTGAAAATTTATTTGGCAAGGTCTGCGTCATTATTGATAAAATTGAGAAGATTCCAGCTGAGGAGATAA AGAAAGAGTTGAAGGTTGCTGGTGTGTCAGAAGAGGCTGTCCATGAGCTATTAGAAGTTCTTTCTGTGAAGTCATTGGCGGAGTTGGAAGGTTCACCCTC TACAGTTAATTGATACTGAAGTATTACAAATTTCCTGAAAATCGTATTTTGTTTCTTGCTATATAAAGTAACCTGTTATAGCTTGGTGCTTGAAAGCAGG TTTATGATAAGAGTATAGGTGCAAGCTTTTGATGCTGGTATATAATTGCCCAAGTTATGGCATGTGCATAATGAAAACTGTATTCTTGTTTCATAGAGAA TTTCTTTATTTTTCATTTATTCTTCATACTTTTTTATAAAAGAAAAACTTCATTAAGATTAAGAGAAGCTGATTGCAAGGAATTGGGAGCATAAGACAAA ATAATATATAAAAAGACTAAAAGAGAACAAACAGAGAAGAAACCATCAATGAAGCAAAGCTGTCTAAATTTTCAACATTTCTGAAAGAGAAACCTCTTTT AAATGACCATTGGCTTCACACCAAATAAAAGCCAAGAATTACACTCCAAAGATGCAAAAATGTCCTTCATTTCTCTTTTTGATAGAGGCGTTGTTTTTCT TCTTCTGAATATCCTGGATGAGATTTTGAAATAATGGTTCATATTATTGTTGGTTGGCTACTTGAATTCATTTTTTGCTTCGACAGATGTATTTGTTTAT TTTGGGTTGCCTATCATGTCCTAAAAATTTCTCCCAGCTTTCCCTTTCTCTTGAAGCTTATCACGTCACCATAAAGTTCATATACTCTGCATTAGTTTGT ACAAAGCAAATCATACAAGTTATATTGAATCTAAATTTGGTTATATTCAGAGAGAGTCGATAGCTGTGGGGAAGCAATAGCTGATCTGAAACAACTATTC TTACTTGCTGAGAAGTTTGGCTACTCAAAATGGCTTCAATTTGATGCATCAATTGTTCGTGGCCTTGCTTACTATACTGGCATTGTATTTGAGGTTTGAT TTTCTTCATAGTCAGTACTTAATAGTCAATACATATTAGATGTTATCGTTACATGAATATGAATAATTTTGAACCTTGTTGGGCTAAGTTCTTGCTTGTG GACTTGCCTCTGTTGCATAATTAGATATTTTTTCCATTGGGTAATGACCTGATTCTGTGACAATTGTAAAGGTTCATTCAAATGTTCTGAAGTTCCTTAG GCAACGTGTTTTAAAATTTATACTCTTCAGGCATAATTGTGAATGGTTGCAAGTGGACTGAAGTTCTAACTGGTTTTTTTTTCTGCAACGAAGTTGTCTT CACTATGCCTTCCACTTACAGTTATTGAGTCAGAAAAACAGACTGTTTTTTTTGTTGCCATTGTTCTTATTATTGCACTAATTTGTAGCTATGGTGTAAT TCGGCTGTTGTATTTCTTTCTCTCTTTCAAATGATTAAATTCTTCAGTAGGGTTTTGACCGAGAAGGAAAACTGCGAGCTATCTGTGGTGGTGGCCGATA TGATCATTTGTTCTCAACTTTTGGTGCTGATGACATTCCTGCCTGTGGTTTTGGGTTTGGTGATGCAGTCATAGTGGAATTGCTCAAAGAGAAGGGTCTG CTGCCAGAGCTCAGCTTACAAGTTCATAACGTTGTGTGTGCATTGGATGAAGATCTTCAAGCTGCTGCTGCTATGGTTGCTAATCTTCTTAGAGAAAAGG GACAGAGTGTTGACTTGGTTTTGGAAAGCAAACCTCTTAAATGGGTTTTTAAACGAGCAGCCCGAACAAATGCCGAGCGGCTGGTTATAGTGGGGAGTTC TGAGTGGCAAAGGGGTATGGTTGGTGTCAAAATTCTGTCTACTGGTGAACAGTATGAGATTAAACTGGATGATCTAAAATAAAGCAGAATTTGAATTTTC CAGATATGTATTTGTCTCATTATACTTTCTAGGGTTTTCAGACATGTATTTTTCAGTCAAGTACTTCACTTATGCCAAATACCTATTTTTTCTATCCCCT CCATGTGTATATGTATGAGCAGAAGGCCATACTATAGAGCTCAATGGGATATTTTAACTTGAAATCTTTAGTTGAATAATTTGTTTGATAACCTATCAAA AACTTTTCATCTTACTTGTGTCCATACTAATGATGCTTACAAACCATTGGTCTTTAATTAGTACAATCAATTTTCTTTCAGATATAGAATGCTGCTATAT TTAATGTAAGTCATCCATATGATGATATTTCCAAATTATCATTACTTTAGAATAAGGTTAGATAAGGTTGTTTCTGCTTTAAGTGAACTAAATGTTGATT TTTGTCCCTATGGATCCATAAATATTGGAAGCCTGTTATTTCTTGCTTATGCTCTTGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_20955; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_261018
| Blastp | Histidine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 75.46% of identity |
|---|---|
| Blastx | Histidine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 81.03% of identity |
| Eggnog | Histidyl-trna synthetase(COG0124) |
| Kegg | Link to kegg annotations (AT3G46100) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456673.1) |
| Pfam | Histidyl-tRNA synthetase (PF13393.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |