Id Trinity | FTRINITY_DN50883_c0_g2_i1 |
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Name Transcript | Ll_transcript_261127 |
Sequence | CCACGTTCATGGTCAACTTTTCCTTCTTTCACTAGTTGCAGTCTCTGCTACTCTGCTCAATCGCTCTTTCTCATTTATCTCCGCGTACTTTTCCCATTTT ACCCCCTCTACCCTCAACTTTTTCCTCAAACCGTGTCTTTCCAGGGACATACCCGTCATTCTACCCTTCTCTTTATCTCTTTATTTATGTTTCTTCTTTG GTACAAGTGCAAGTGATGTACTCTACTAGCTATTAGGTGAGACAAAACATGGCTGAAAACGGTGAAGAGAAATTACTCGCTGTGGCGCGGCACATAGCAA AAACCCTAGGCCACAACAACATCAACATGGCCGATGATATTCTTCAAATATTTTCAAACTTCGACGGAAGGTTCTCGAAGGAGAATCTTTCTGATAAGGT TCTAGATTCTGATCATAGATCCTGCGTCGAACTCGATCACTCCCTCAAATCACTTGATCAACGTATCTCTCACTTTGTCTCCTCCGATCACCCAATTTGG GCTGACTCTGCTGGCTCCGCCGCCTTCCTCGACGCCGTTGACGATCTCGTCGCCGCTCTCTCCGAGTGGAGTTCACTTTCCTCCGATAAGTCCGTTGGTG CGTGTATCGCACGCGCCGAGAATATGCTCCAGCACGCTATGTTCCGTCTCGTGGATGAGTTCCGGTGGCTCATGGAACGTGGTGGTGAATCCTTCGACTT GAATCGTCCGTACATCAAGTCAACGGAGAACAAAATGCAGTTTGGCTCGGGGGAAGATGAAGACGAAGAAGAGATGAATGGAGAAGAGGAGGAACAGATT CCGGTGGCGATTCCGGTAACCGATTACGACATCGTGATTGATGCGTTGCCGTCGGGAACGATCAACGACCTTCACGAGATCGCGAAGCGAATGGTGGCCG GAGGGTTCGGGAAGGAGTGTTCGCACGTGTATAGTAGTTGCCGGAGGGAGTTCTTAGAAGAAAGCATTTCGAGGCTAGGATTAGAGAAACTGAGCGTCGA AGAGGTTCACAAGAAGACGTGGCAGGAACTGGAAGACGAAATCGAGAGATGGATTAAGGCTTCGAACGTCGCTCTCAGGATTCTGTTCCCAAGCGAAAGG AGACTCTGCGATCGCGTTTTTTTTGGATTCTCCTCCGCCGCGGATCTCTCTTTCATGGAGGTTTGCAGAGGATCAGCAATTCAGTTGCTCAATTTCGCGG ATGCCGTCGCGATTGGTAGCCGTTCACCAGAGCGGTTGTTTAGAATTCTCGATGTGTTTGAAACATTGCGTGACCTAATTTCAGAGTTTGAATTGTTGTT CTCCGATCAATACAATGTGTTGCTTAGGAATGAAGCAATTACAATTTGGAAGAGATTGGGGGAAGCAATTAAAGGAATTTTCATGGAACTGGAAAACTCA ATTCGGCGTGATCCGGCGAAGGTGGCTGTTCCTGGTGGTGGGCTTCATCCGATTACTCGCTATGTGATGAACTATCTCCTTGCTGCGTGCCGGTCACGAA TATCCTTGGAGCAAGTATTTGAAGAATATCCAAAGCTTGATGATAGAGTTGCATCATCCACTTCTTCATTATCAGTGCAAATGGATTGGATAATGGAACT ATTACAGACCAATTTGGAAGCCAAGTCCAAAATCTACAAAGACACTGCTTTGAGCTATATTTTCTTGATGAATAATGGGAGATACATAGTTCAAAAGGCA AAAGATAGTGATTTGGGAACCCTATTGGGTGATGATTGGATAAGAAAACACACTGCAAAAGTGAGGCAATACCATGTGCAATATCAAAGAAGTTCATGGA ATAAGATTTTGGGGATTCTGAAATTGGATAACAGCAATGGGTCAATGGGGGCTAATGGTTTTGCGAAAACAATAAAGGAGAAGATCAAGTTGTTCAACGC GCAGTTCGATGAAATATGCAGAGTTCAGTGTTCATGGTTTGTGTGTGATGAACAGCTGAGGGAAGAAATAAGAATCTCCCTTGAGAAAATATTGTTGCCA GCATATGAAAACTTCATTGTAAGGTTCCGTAATGTACCAGAGCTTGGTGGTAAGTATATTAGGTATGGAACAGGGGACATTGAAGCAAAAATTAATGATT TGTTTCAAGGAAGCAGTGGATCAAATGGTAGGTGTAAGTGAAGAAAAACCTAAGAATTTGTTCTTAATGTTGATATTTTCTACTGTTCCATTGTGCAATG CTTAGAGCAGTATCAGAGACTAGGACTGTAATGAATGAAGAAGTTTATAATATTTAATTTACGTTTTTCTTTTATTATTTTGGTTTTTTTCGTTTTAGAT TTGCGGCTAAGTGCAAGTCCCTACAATGCTTCGGATTCTTGCTTCAGCTAAAAAGTAATATATTTTAGGTCCTTTCAATGCAAGTTAGCAGAAGATTTAA TTTGTTAGTATATAATATACATGGGTATCGGACAATTCAAAATACTTAGAAAATATAAGTATATATTAGAATGAAAAAAAGAAGAGTGGTATACAAATCC TCTAACATCATCGAGAGGCATCTCATTACCGAAAAAAGTCTAGTCCAGGATTTCGGGTTAGTGGAATTTGATCGAGACAAAACAATTCTCTTTTTTATAT TTTTTTTTAGTATTATCAAAT BLAST |
Tissue | flowers |
Gene name | LI_gene_20962; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_261127
Blastp | Exocyst complex component EXO70B1 from Arabidopsis with 68.74% of identity |
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Blastx | Exocyst complex component EXO70B1 from Arabidopsis with 68.74% of identity |
Eggnog | exocyst complex(ENOG410YIGI) |
Kegg | Link to kegg annotations (AT5G58430) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432144.1) |
Pfam | Exo70 exocyst complex subunit (PF03081.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |