Id Trinity | FTRINITY_DN50902_c0_g1_i8 |
---|---|
Name Transcript | Ll_transcript_117170 |
Sequence | GTGTGGTTCTCACTTCTCATACTTTCTCTCATATCTCAAATCTCAATGGCTTCTACTCAAGGTCAAATCATTACATGCAAAGCTGCGGTGGCCTGGGAAC CCAATAAGCCCTTGACAATTGAAGATGTTCAGGTGGCTCCGCCGCAAGCCGGCGAGGTTCGTGTGAAAATACTTTACACGGCTCTTTGTCACACCGATGC TTATACTTGGAGCGGCAAGGATCCAGAAGGTCTCTTCCCTTGTATTCTTGGTCATGAAGCTGCTGGGTAGATGAAAAAAGTTGCTTATTTTTTTAAGCTG CAAGATGTAAGCATACACATTGGCATATTTGATTGTTGATGTGAACTTTTATCCTTTGGTGCAGGATTGTAGAAAGTGTCGGAGAGGGCGTTACTGAAGT TAAGCCTGGAGATCATGTCATCCCCTGTTATCAGGCTGAATGTGGAGAATGCAAGTTTTGCAAATCAGGAAAAACAAACCTTTGTGGCAAGGTTCGTTCT GCCACTGGAGTTGGGGTCATGCTCAATGACCGCAAGAGTCGTTTCTCTCTTAATGGAAAACCCCTCTATCATTTTATGGGAACTTCCACATTCAGTCAAT ACACTGTTGTTCATGATGTCAGTGTAGCTAAGATTGACCCAAAAGCTCCTTTGGAGAAGGTTTGCCTTCTTGGATGCGGTGTTCCAACTGGCCTTGGAGC TGTCTGGAACACTGCAAAAGTGGAAGCCGGGTCAAATGTTGCTATTTTTGGCCTTGGAACTGTTGGGCTTGCTGTTGCGGAGGGTGCAAAAGCTGCTGGT GCATCCCGGATTATTGGCATTGATATTGATAGCAAGAAGTTTGAAGTAGCTAAAAACTTCGGAGTCACTGAGTTTATCAATCCAAAGGAACACGAGAAAC CTATTCAGCAGGTAATAGTTGATGAAACAGATGGTGGAGTTGATTATAGCTTTGAGTGCATTGGAAATGTCTCTGTGATGAGATCTGCTCTGGAGTGCTG CCACAAGGGTTGGGGGACATCAGTTATTGTAGGTGTTGCAGGATCAGGGCAGGAAATATCAACTCGCCCTTTCCAATTGGTAACTGGGCGTGTCTGGAAA GGAACAGCTTTTGGTGGTTTCAAGAGCAGGTCGCAAGTGCCTTGGCTTGTAGAGAAGTACTTGAAAAAGGAAATCAAAGTTGATGAATACATAACCCACA CTTTGACTCTTGAAGAGATCAATAAGGCTTTCGATCTTTTGCATGAAGGAGGGTGCCTACGTTGTGTGCTCGCTACAAATGCATGAGTTCATTCATCAAA AGTCTCTGCTAGTTTCATGTGGAATGGTTGGTTTTTCCTCTCTTGTGGTGATTGTAGTTACGTTTAGCTGAGTGGTTGTAATTTCTAAGATCATGGTTTT TAATCTGGACACGATCTTACGTATCTCTTTGGAAACTAATAATAACAAACCAATGCTTTTGATTTATGTTATGGATATGCTATTATTATATGGCAAATGT TAACCTACCAAGTTTATGGGAAAATACTATAATTGATAGATTAAACATTACGTATTTGGTCCCCCAATGAATTTTTTTACTGCTTTCTGGCTCCATGACT GGACTAAATAATAAATATACCAGCTTTCAATAAATTTCTTTGATTTCAACTTAAAAATAGTATGTTTTATTTAGATATGTTATATCCTTTTACCATAT BLAST |
Tissue | flowers |
Gene name | LI_gene_20992; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_117170
Blastp | Alcohol dehydrogenase class-3 from Oryza sativa with 90.94% of identity |
---|---|
Blastx | Alcohol dehydrogenase class-3 from Oryza sativa with 91.48% of identity |
Eggnog | alcohol dehydrogenase(COG1062) |
Kegg | Link to kegg annotations (4331130) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425929.1) |
Pfam | Zinc-binding dehydrogenase (PF00107.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |