Ll_transcript_117029

Id TrinityFTRINITY_DN50954_c0_g1_i7
Name TranscriptLl_transcript_117029
SequenceCTTATTATTACACGTGACATAACATTCGGAATTGAAAACCCAAAAACAAAGAAACAGATCAGAGAGATAATTGGTTTTGGTTCGAAGGGATCACAGAGTA ACCGAATTGAATCAAAATGTTCCATCAATTTGGAGCGACGGCGGAGTCTCTGAGCAAGGCGTCGACGGCGGTGTTTCGGATCGGCACCGACGCGCACCTC TACGACGATCCTGAAGACGTGAACATAGCTCCTCTCCTCGACAGCAAATTCGATTCCGAGAAATGTGAAGCTCTCAAACGCTTACTCGCTCTCATCGCTC AAGGCTTCGATGTTTCCAATTTCTTCCCTCAGGTTGTTAAAAATGTTGCGTCTCAATCATTGGAAGTTAAGAAGCTGGCTTACTTGTACCTCCTGCATTA TGCTGAAAAGCATCCAAATGAAGTGTTGCTATCCATTAATTGTTTCCAAAAGGACCTGGGAGACACAAATCCATTGGTGAGGGCATGGGCGCTTCGTGCC ATGGCGGGAATCCGCCTTCATGTAATTGCGCCTCTTGTCATAGTTGCTGTTGGAAAATGTGCTAGAGATCCTTCTGTCTATGTTAGAAAATGTGCTGCTA ATGCTCTTCCTAAACTTCATGATTTGCGGATGGAGGAACATACTTCTGCAATTGAAGAGGTCCATCTGTTTTGTTCTGCTTATCATAGATTTTCCTTCAC ATGTACTAGTACCTTGACTACATTCAGCTTAACCTAGTTGGCAGAATAACTTGAAGAGAAAAATGACTTATTTTCTGCAGGGTTTTCTTGGGGCATATAC TTTTGAACTAAGAGTTATTTATAGAAAGTTTTGTGCCAGAGATTTGACTTCATTAATGTGTGGTTGCAAGTCTATTTGCAGGTTCAGCTCATAAACTTTG ATTCTTCATATGGTGCAGATTGTTGGACTATTGTTAAATGACCATTCCCCAGGAGTTGTTGGAGCTGCTGCTTCTGCATTTACCTCTGTTTGCCCGAACA ATTTTTCATTGATTGGAAGAAATTACAGAAGGTTGTGTGAGATTCTTCCTGATGTGGAAGAGTGGGGTCAAATAATTCTAATCGGAATCCTTCTGCGGTA TGTGATAGCGAGGCATGGGCTTGTCAAAGAATCGATCATGTGTTCTTTTTATAATAAAGATGATGGCAATGTGGTGAAAGATGAACCAGACATTGTTTTT AAAAAAAATTCTAGTTATGCCAATGAGGAGGCTGTATCTGAATTAGCAAATATGATATTTCAGTGTTACATTGAAGGGCCAGATGAGTACTTATCACGGT CAAGTTCTACAAATAGGGTTGCTCCTAAATTAGATGTATCACAATTTACATCTTGCAGTAATGATGTTGTGAAGATCCTGCTGCAGTGCACATCACCATT GTTATGGTGTAATAACAGTGCAGTTGTACTTGCAGCTGCTGGAGTACATTGGATAATGGCTTCTAAGGGGAATGTTGAAACAATTGTTAAACCACTCTTG TTTATAATGCGATCATCATATGCCTCAAGATATGTGGTATTATGCAATATCCAAGTGTTTGCTAAAGCTATGCCATCTCTCTTCACTCCACACTATCAAG ACTTCTTCATATGTTCTTCAGATTCCTATCAGATAAAAGCGCTGAAACTGGAGATACTTTCTTCTATTGCTACAGATTCATCTTTTCCATACATTCTGAA AGAGTTTCAGGATTATATTAGAGATTCCGACCGGAGATTTGTTGCTGATACAGTTGCTGCCTTAGGACTATGTGCCCAGCGACTTCCCAAAATGGCAACT ACATGCTTGGAAGGATTGTTGGCTCTGATTAGACAGGAACTTTCGTGTGGTGAAATCAGATCTGTGGATGGAGAAGAGACAGTGCTAATTCAGGCAATTA TGTCCATCAAGTCAATTGTACAATTAGAACCCCCCAGTCATGAGAAGGTTATAATTCAGTTGATCCGTAGTTTGGATATAATCAAGGTTCCTGCTGCCCG TGCAATGATTATTTGGATGTTGGGGGAGTATTGCTCTTTGGGTGAGTTAATTCCAAGGATGTTGAGTACGGTGCTAAAGTATCTTGCTTGGTGTTTTCCT TCAGAAGCAATAGAAACCAAGCTTCAGATTCTTAATACAACTGCAAAGGTCTTACTATGCATTAAGGGAGAAGATATTTGGACCCTGAGAAAAGTCTGGA GTTATGTAATTGAACTGGCTGAGTGCGATCTGAACTACGATGTCCGTGATCGTTCGCGTTTCTTAAAGAAACTTCTCTCAAGCAATTTGGAGCCTCAAAA TTTGGAAGAAGAAAACAGTGAATCACAAAGAAGAGACCAGTCCTATGTACTTGCAGAATGCATATTTGGTAGACAAATAAAAGCTGTGACAGTGTCATCT GAACCCATCAATTACCGGTTTTATCTCCCCGGGTCTCTTTCGCAGTTAGTATTCCATGCAGCTCCAGGATATGAACCTCTCCCAAAACCTTGTAGTCTTC CATATATTGATCTTGATCAGCGTGATGGAGCTTCTGAGGGTGATTCAGATGAGGAGGATGGTTCTGGCACATCTGGATCATTGGATGAGGAAAGTGCTTC TGATTATAGCTCTGAACAGTCAATTACTGGTTCAAGTGAAGACAGTGGCAGTAACGAGAATGTTTCTGGCAATGAAGGTGGCAACCATGCAGATCCATTG ATTCAGATTTCAGACATTGGCAATGTCTATGATAACCAGAATGGTGGGGCTCATTCTAGCACAGCCGATTTTGGGGACTTGATGTCAACTAAGTCTCTTG AGTCTTGGTTGGATGAGGCACCCACATCATCAAACGAAACTGGAACAGAGCAAAACCGAGTTCATAGATCTTCAGCGAGAATAACAATCAGAAATATCGA AAGCCGAGTTAAACCCAAATGCTACACACTTTTAGATCCTACAAATGGAAATGGGTTAAAGGTGAATTATTCATTTTCATCTGAGGCTTCGAGCATTGCC TCCCATCTTATATGTCTAGAACTATACTTCGAAAATTTTTCATCGGAGCCCATGTTTGATATAATCTTAATAGATGAGAATTCTAGTAAAAGCTCAGATT CTATGGACCAAATATCTCCGACATCTGAAAATACCTTGAAAATCCATACTGATAAACCAGCATTGGTTTCCATGGAGGAGATCCCTTCTCTGGAGCCTGG CCAGACAGCAAACCGGACTGTACTCGTTCGCTTCCATCACCACCTTTTGCCTCTGAAACTGGCTATATTTTGCAATGACAAAACATTCCCTGTTAAGTTA CGACCTGACATTGGATACTTTGTAAAACCACTTTCGATCAGTATTGAAGCTTTCAGAGATAAGGAATCTCACCTTTGCGGGATGTTTGAATATGTGAGGA GTTGCGCCTTCACTGATCACATTCAAGAGCTGAACAAGGGAACTAACTCTTTGACAGAGGACAAATTTCTTGTGATCTGTGAAAGCTTAGCACTTAAGAT GCTGAGCAATGCAAATCTTTCTCTTGTATCTGTGGATATGCCGGTCGCTTCCAACCTTGATGATGCTTCTGGTTTGTGCTTGCGTTTCAGCAGTGAGATC TTGAGCAACTCCATACCATGTTTAATTACAGTTACTGTTGAAGGTAAATGCTCCGACCCATTGACTGTTTCTGCAAAAGTCAACTGTGAAGAGACTGTAT TTGGCTTAAATTTCTTAAATAGGGTTGTCAATTTCTTGGTGGAACCATCTGTTACCCACTCATAAGTTTTGATATTGTATAGAAGATTCATAAATATTAT TCATTTATGAGATGATATATTGGAAAAACTTGAAGTGCAATCGTTTTGGTTTTGGATGTATTTTAGGCTATGGTGAGTTATTGGAGTTATGGTTTTCCAT TTTTTAATCTGTTGGGAAGGATGAAAATGGAGGGAGGTTTTGTAATTCAACCTTGTATGACTGTAATCTCTAATTTTCCATAGATTTTCATGTCTTCTTT TCAATTCTCATTGAGTGTGGTTATGGTTTCTGGTGAAATGGAGCTTTCTAATTTAGTTTCTGATTCAGTTGTAAGCAAAACACAACTATTGTATGAGGAA TTTATACTGAACCTTTTCTGAGAAGCATATTTTGTATTTTACTGAATTTTGATGTGAGATAAAAGAGTTGCTATGTTCATAAGCCTTCACTTTTATGGAG TTGCTATGGTCCCCTCTACCTAAATGTTTGATGC BLAST
Tissueflowers
Gene nameLI_gene_21084; 
Additional informationdetails; 

Expression of Ll_transcript_117029

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_117029

BlastpAP3-complex subunit beta-A from Arabidopsis with 56.49% of identity
BlastxAP3-complex subunit beta-A from Arabidopsis with 54.24% of identity
EggnogThe coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins(COG5096)
KeggLink to kegg annotations (AT3G55480)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019432911.1)
PfamAdaptin N terminal region (PF01602.19)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;