Ll_transcript_271917

• Id Trinity: FTRINITY_DN51030_c0_g1_i1
• Name Transcript: Ll_transcript_271917
• Sequence: CCAAGTCCAATCTTCTATCATAGTTTATAGGTTATTATTGTATCCATACCCATTACACATTGTTCGTTTTTTTCTGTTCCGCCTCCTTCTTATTCACTCA GTAGAGAACTCAAAAAAACATCAACACTATGTATCGCGTTCTCCACCGCAACTTGTGTACCTTAATACAGCCCACCACTGCCGCCGCCACCACTGCCGCT GCCACCACTGCCGCCGCCACCACTGTCACCGCCGATACTACCGTAACCAGCTTCAAATCCATATCTCAGGATATCTTCAAAGAACAAAACTTCAAACGCC TTGTGGACAAGTTCAAGAAAGCCTCCGACATCGACAGCTTCCGAACAAAAAACAGTTTTTACGGCGCAATCGTTCGCCGCCTTGCCGTCGCCAAGTGTTT CAACCTTGTCGAGGACATTCTCGAGCACCAGAAACAATATTCAGATATCTCCAAGGAAGGCTTCAACGCACGCCTCATCACTCTATATGGCAAATCAGGA ATGCATAGAAATGCACGCAAGGTGTTCGACGAAATGCCAGAACGAAACTGTACCCGCACGGTACTCTCTTTCAATGCCCTCTTAGCGGCTTATCTCCACT CAAGCAAGTTCGAATCGGTTCATCGCCTTTTCAATAAGCTTCCCGAGGAGCTCTCCATTGAACCTGATTTGGTGTCATATAACACTGTCCTTAAGGCTTT GTGTGAAAAGGGTTCTTTTGATTCTGCGTTAAGCTTGATCAGCGAAATGGATAAGAAAGAATTGAAACCTGATTTGATCACGTTTAATACCATGCTTGAT CAATTGTACTCAAAGGGTCGTTTCGAGGACGCTGAGAAAATTTGGAACCAAATGGATGTGAAGGGTGTTGAACCTGATATTAGGAGTTACAATTCTAGGT TGGTGGGTTTGGCTTTGGAGAAGAGAACAAATGAAGCTGCTGATTTTCTTGTGGAAATGGAGAAAAAGGGTGTCAAGTCTGATATTTTTAGCATCAATGC TTTGATTAAAGGTTTTGTGAATGAGGATAATTTGGATGAAGCTAAGAAATGGTATGGTGAAATAGCAAAGTCTAGTTATGACCCTGATAAGACTACTTTT GCGACCTTTGTCCCCTTCCTGTGTGAGAAAGGTGAATTGAAACTGGCAATTGAGGTGTGCAAGGAGTTCTTCAACATTCAGTGCCGTGTTGACGTATCAT TGCTGCAGCTTGTGGTGGATAAGCTGGTGAGTGAGTCCAGGATTTCAGAAGCGAAGGAGATTGTAGAACATGCGAAAACCAATAGGTACTCACGCTATAA ACTGAATTTGCCAGCAGCTGAATAGAGCGTAGTAGCATATCAATTTGTTTTTTTGTTGTGTCTATTGTTAATCTTGCACTTTAAATGTTATGTTACAATG GTGAATTGGATATTGCCACCAAGAATTGGTTTTGTTCTTGTTTGGTGAGCTTAGTAACTGATTTACTTGAAGATGGCATTCACTGTCATTGCTTTTAGAT ATTAGCCACAAAATTGAGAGCATTTCCTCCTCTCATTTCTACTAGGTGAGAGCATTTCCTGAACTTATTTTTTTCTCCCCCTTATATATTTGGTGAAGCA TTTCCGACCAACTTTTCCTTCTTTCTTTTAGTGGTAATAGAATTGGCACAAACAACTAAATTGTGGGTGAGAATTGTGAGAAATGACAATGGTAGT
• Tissue: flowers
• Gene name: LI_gene_21253;
• Additional information: details;

Expression of Ll_transcript_271917

FPKM

• FPAB: 6
• FPNAB: 12.6
• LF1: 7.3
• LF2: 5.5
• LF3: 6.5
• LF4: 9.6
• UF1: 6.5
• UF2: 6.3
• UF3: 8.1
• UF4: 9.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_271917

• Blastp: Pentatricopeptide repeat-containing protein At1g55890, mitochondrial from Arabidopsis with 51.46% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g55890, mitochondrial from Arabidopsis with 52.53% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G55890)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445622.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;