Id Trinity | FTRINITY_DN51059_c0_g1_i4 |
---|---|
Name Transcript | Ll_transcript_271362 |
Sequence | ATGATACCTCCCTCGCATCTCACACTTTGATAGCATAGCAGAGACATCTGATCTGTAAACCCCAATCCTCCAAATAACTAAAATTCATTTGAGACTAGTC ACTAGTGCCTTTGTCCACTCATTCCCCTTTTTACAAATCTCTCAAAATTTCTCTCTTCCATTCCCTTCATCACCATGCCTGGTATCGTAAAATCCCCAAC CGACGCTCCACCTCCCAGGCTCACAATACCCAATACCCCAACCCAAAGAACCGAATCAACAACAACACCAATAATCAAAACCTCTTCCCCTATCCCCAAA AAACCCCCTTCTCCTTCCCCTTCCCGGTCCAAGAAAAAAAACCCAGAAACCCCAACCTCGAACCCGGTTCACTCGGAATCCTCACTCGACAACCCGGATC TCGGTCCATTCCTCCTCAAAGTCGCCCGAGACACAATTGCCTCTGGCGAGGGCCCCACCAAGGCGTTAGATTACGCCATCCGCGCCTCGAAGTCTTTCGA GCGTTGCGCGGTCGATGGCGAGCCTAGTTTGGACCTCGCCATGAGCCTCCATGTGCTTGCTGCTATTTACTGCAGCTTAGGGAGGTTTGAGGAGGCCGTG CCCGTGCTTGAGCGCGCGATCCAGGTCCCTGATGTGGATCGCGGCGCAGATCACGCGCTCGCGGCTTTCTCCGGGTATATGCAGTTGGGGGATACTTTTT CGATGCTTGGACAGGTGGATAAGTCTATATCTTGCTATGATCATGGGCTTCAGATTCAGATCCAAGCGTTGGGTGAGACTGATCCTAGAGTAGGAGAGAC TTGTCGATACTTGGCCGAGGCCAATGTTCAAGCGATGCAGTTTGATAAAGCAGAGGAGCTGTGCAAGAAAACTCTCGAGATTCATCGTGCACACAGTGAA CCAGCATCTCTTGAGGAGGCAGCTGATAGAAGACTTATGGCCCTTATATGTGAGGCAAAGGGAGATTATGAATCGGCTCTTGAACACCTTGTCCTTGCCA GCATGGCTATGATTGCGAATGGACAAGACAATGAAGTTGCTTCTATTGATGTCAGCATTGGAAACATTTACATGTCTCTCTGTCGCTTTGATGAGGCTAT CTTCTCATATCAGAAGGCACTAACTGTCTTCAAATCATCCAAGGGTGAAAACCACCCTTCGGTTGCATCTGTCTTTGTACGTCTTGCTGATTTGTATCAC AGAACTGGAAAGCTTCGAGAGTCCAAGTCCTACTGTGAAAATGCTCTAAGAATTTACTCAAAACCAGTGCCTGGAACCACATCAGAAGAGATTGCTGGTG GTTTAACAGAAGTTTCAGCCATTTTTGAATCTGTGGAAGAGCCCGAGGAGGCACTGAAACTCTTACAAAAGGCAATGAAATTGTTGGAGGATAAACCAGG ACAGCAGAGCACAATTGCTGGAATAGAAGCACGGATGGGAGTGATGTATTACATGACTGGGAGGTATGAAGAAGCAAGGAGCTCTTTTGAGAGTGCTGTA ACAAAACTCAGAGCCAGCGGGGAAAGGAAGTCTGCCTTCTTCGGAGTTGTTTTGAACCAGATGGGATTGGCATGTGTACAGCTGTTCAAGATAGATGAAG CTGCTGAATTATTTGAAGAAGCTAGGGGAATTCTTGAACAGGAGTGTGGTCCATGTCATCAAGATACTCTTGGAGTATACAGCAATCTTGCAGCAACTTA TGATGCTATGGGAAGGTAAAATTACTGTTTCAACATCCTTGTTTTCCTTTAACTCATACTCACTGTGGCGTTGTCTGCATAATTCCTAGATTTCACTGAG TAAATTATTTTCTTCTCTTGTTGGTTTCATCCATGTTATTCTAAGTGCTAGTAAAAAGGGTGGCTTAGTTAGTGCCCGAGGCTCCCAGCTAGTGGTGTTT GGGGGAGGATATATGTATGCCACCTAACCCATACAACCGAGGAGACTGTTTCCCGGATTGGAAGTGCTCTTAAAGCAGACATAGAAGTTTTAGTTATTGG TTAACATTGTGAGAGACTTCTAAGCTTCGGACTAGAAGCTAAGTGATGTAGTTGCTCCCGTAGTTATATGCTTGGATGCATGATTGCATATTTTCTGCCT TACCTGTGTTGACTTCATTTTTTTCTTAAATCCTCCACCTGAACATTTGCTTTTGTATTTGTCATCAAGTATATAACATTATAACTTCTCTGTTTCCTTG AGGAGTTACCGTTGGTTTGAACACTCATCTCTCATAGTAACTCACTCCTTTTTATCAAAGTTTATACCCACCTTCTATGCTCTTCATGAGTCAGGATTTC TAGTTATATTTCTGATGTTGCCATTTTTGTAATAGAATACATCATGTAATATCTATTTTAAGCTTTTTGACGCCATAGAACTTATATGTTTATTGAACCT GACAGACTTTGTTCTTATCCTAATATGATGCTATTCTTCAGGGTGGGGGATGCTATTGAGATCTTGGAATATGTCCTTAAATTGAGGGAGGAAAAGCTGG GAATAGCAAATCCTGATTTTGAAGATGAAAAGCGTCGTCTGGCCGAACTTCTGAAAGAAGCCGGGAAGACACGAGACAGAAAAGCGAAATCTCTGGAAAA CCTTATTGATCCCAACTCAAGGAGGACAAAGAAGTAGGGGGGAAAGAAGTGGCCTGGTTTGGGTTTTAGAATTTAACCATATTTTTACTCATTATATATA TTGAATGCACATTATGTAACCTAGATTGTCTTGTATAGGGTTGAATATCTAATTTGGAAGCTTCTTTGTTTCTTTGATCTTTGTTGTGGCATTTGTTTTT ATTGGTTAATTGTTTTATCAATTGTGTTGTGATCTTTTAGTTGTACCAAAAAACTCAATCCCTGTTCTACTTTCCGGAAAATATTGAAAGCAAATTTTAT TTGAGTGAATAAATTTGAATGATGATGTGTTTTATTCCTCAAAAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_21310; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_271362
Blastp | Protein KINESIN LIGHT CHAIN-RELATED 1 from Arabidopsis with 78.68% of identity |
---|---|
Blastx | Protein KINESIN LIGHT CHAIN-RELATED 1 from Arabidopsis with 77.47% of identity |
Eggnog | repeat-containing protein(COG0457) |
Kegg | Link to kegg annotations (AT4G10840) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421593.1) |
Pfam | Anaphase-promoting complex subunit 5 (PF12862.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |