| Id Trinity | FTRINITY_DN51062_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_271412 |
| Sequence | CTAATTTCTTTGAACATTTTTCCCTTTCTTCTTACTGTTCAATAGTGAAACCTTATCAGACCCTTACTGGTGCCTTTCAGTGTAATTACTTAAGCAAAAA ATTGTTAACTAACTTATAAGGGTACTTAGAAGTTTAATTGATGTTGTTGCTGTCATGGAAATCTAGAGGGAGTAAATTGATTCTGACTGACCTATATCTG TTGTTGCATATATACATTGTGATGTATGTTTACTTTTAGTGAATACCTCAACCTTAAAAGAATCAAATTCAACGACGATCTAGTTCATTTTAGATTATAG TTGATCTATATACATAAATGTGGTAAGAGGAATCTAGAAGGAAGTTGTATTTTATTTTTAGATTAGATGTCCCGTTTTGCAAGTTGGATTCGTTCCGTGT TTATGACTTTGAAGTAGTTTGACCATGTATAGTAGTGTTAGAATTTACATGTCCGCGTTTGGCTTGCCAATTGGAAGTTGATGAAGAGAATTGAGAATAT GATCATATTGTGTTAGATTTGTTTGAACCTTATGTGTTAGACGTTTGCAATGGTTTAAATTACAGTTGTGGTTGTGGTTACGTTGCGTTTAGTTTTGTTG TGAGGCTTGTCTTTGTTTATTCAACCTTCTCCCTTTTTTTCATCCGTTATTCAAGTCTATTCTATTTAGTTTTGTTTTTGCTAGTTGTTGGTTCATTGAT GTTTTTGTACTAGACTAGTAGGTGTTTCAGTCTTAAATAAATAGTAATGAGTTATGCATTATAGTTGCTTGAGGAAATTCCACAAGGAGAAATCCGATAA CAAAATTATTTTATTGGAAATAACATCCCCGGTATTGGTCTTATACACATCTTGCACTTTCTTGTGCATTTCTTTTGGAAGGTCTGAAGCTTCAACACAG TGTAAAGGACTAACCGGGTTCCACTCCAACAAGTTACCATTTTGGTGAGCCATAACTAAATCAACATACACAAATGTCTGTATTTCAAGCAAGAGCCATT CGACATGCACAAACATGTATATCTAGATGCTCTTATACTCTTCATTCTTGTCACTCACACACTCCCCGCTACATGTCTAAGCTTGCTCCTTTGCAGGAGA GGAAAATGAGAGACAGGGTTAAAATATTTGCAAAAGCAGGTGATGGAGGTGGTGGTTGTATCAGCTTTCGCCGTAGCCAACGTGATCGCCATGGCAGACC TGATGGTGGCAATGGTGGTAGAGGCGGTGATGTGATTTTGGAATGCTCTCGCAGAGTTTGGGATTATAGTGGTTTGCAGCATCACCTAGTATGCACTTAT ACTTTGTACCAAATTTATGTGAAATTATGAAATTTTCATGTCCAAAAGGTTAGTGACATTAATCTTGCCCCATAGATAGCTGAGAAAGGAGGACAAGGGT TATCAAAGAATAAGATAGGAACCAGGGGTGCTGACAAGGTAATCGGTCTTTATCGGTTCTTTTTCCTTGTAAAATGTTTGAAAATTTTCTTTCCTTTTGT ATGGCATCTGCAATGCAGAACTGTGAGTTCATTCCGAAATCATATACTCTAGTAGGTTGTTCATGTACCGGTTGGCACTGTACTTCATCTTCTTAGCGAC CATATTCCTTCTGTAGTCAAAATTGAATCATCAGCAGATGTAGATCCTTGGGATATTCCGGGTGCACTTGCTGAAGATCTTTCTGACCCTGTTGGTAGTT CTTTCTCCAATGCTACAAGTGGCAAAGCTGAAGTTGAAGCAAGACATCCTACTGGCTGCTCCACATCACAAGGTGCTGAAACAAAGGTTGAGAAATCTTT AAAATCAAGACAATTTGCACCAACGGATATATCTTCCCAACTTTCCAGTATGGACGACACTCTCAAATTTGGTACAGAAGATATAGGAGAGGAACAAGAG ATACAATACAGTGTGGCAGAATTAACAGAAGAAGGTCAACAAATTATCATTGCTCGTGGAGGAGAGGGTGGTCTGGGCAATGTGTCTATGTCGAAAGATT TAAGGAAGTCTATGGCTACAAAGGTAGGGGCCTATCAAGATAGACCAGATCTTGACGACTCGGACAGTGATTACTCCTCCCTGAGTGGAGGCGTGCCTGG TTCCGAGACTGTTCTTATATTAGAGCTCAAGAGCATTGCTGATGTAAGCTTTGTTGGAATGCCTAATGCTGGTAAAAGCACTCTACTTGGGGCTATCTCA AGAGCTAAGCCTGCTGTTGGCCACTATGCCTTTACCACTCTTAGGCCTAATTTGGGGAATCTCAACTATGATGATTTCTCAATAACCGTGGCTGATATTC CTGGACTTATAAAGGGTGCACACGAAAACCGTGGACTTGGACATGCATTTCTGCGCCACATAGAGCGCACAAAGGTTCTGGCTTATGTAGTAGACTTGGC TGCTGCTTTAGATGGAAGGAAGGGAATTCCACCATGGGAACAGCTGAAAGACTTAATCCTAGAGCTTGAGTACCACCAGGACGGGTTATCCAATCGGCCA TCCTTGATTGTGGCGAATAAGATCGACGAGGAAGGTGCAGAGGAAGTTTATAAAGAGTTACAGAGAAGGGTTCAGGGTGCTACCATCTTTCCTGTGTGTG CTGTTTTGGGAGATGGTATACCAGAACTTAAAGCTGGCCTTAGATTACTTGTCAATAGTGAAATGTCATCTACACTTTCCTTGGATCAAATTTTTATAGA TTAGATTACTATTAACAACTACTCATGTATTTGTCCAAACACCCCAGTTAGGAAAGATAGACCTGGAATTGTTCTATGCAGGGTTGAGGCCTTTTTTTGG TACATGCATTTGTGAAATCCAAAATAAACTCCCTAAAAGCAATGGTCTTAGCTTCATCAAACATCTAGTATGTGCCACATTAGTATATTTTTTATATTGT TGTTTTGATTTGGTCATACCAATGGTTTATAGCTTTTCTATCTGATTTTATCACAGAATTAGGATTCAGTAATGCTTCTTCAGTAAGCATTTTCCCATCA ATTTTAACTCTCCAAACTTTGTTAATTGGGACAGGGGAGATATACTAATTAGCATTTTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_21314; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_271412
| Blastp | Probable GTP-binding protein OBGM, mitochondrial from Arabidopsis with 68.25% of identity |
|---|---|
| Blastx | Probable GTP-binding protein OBGM, mitochondrial from Arabidopsis with 50.09% of identity |
| Eggnog | An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate (By similarity). It may play a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control(COG0536) |
| Kegg | Link to kegg annotations (AT1G07615) |
| CantataDB | Link to cantataDB annotations (CNT0002738) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453178.1) |
| Pfam | 50S ribosome-binding GTPase (PF01926.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |