| Id Trinity | FTRINITY_DN51071_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_271345 |
| Sequence | ATCCAAACGGCCTAACTTACCTGGGCTTCCTCTACTGCAAACTTTTCTATCACACCCAACATTCTGAATTCTAACTGGAACCACACTAAACGACGACGCC GTTGCAACAGGATTTTGTTCACTCGAATCACAACACATTGGTGGTTGTGATTCTCACTTGGGGGTTCCTTCTTTTCTGTTGGAAACTTGGAATTAATTTG GCTTGGCTACCCTTCAAAACATAATGGATCAAGCACGAACGGCCTCAGGGAACGGCGAGGACAATGTTGGGATTCCAGATGATTTGCGATGCAAGAGATC AGACGGGAAACAGTGGAGATGCACTGCAATGTCCATGCCCGATAAGACAGTGTGTGAGAAGCACTACATCCAGGCTAAGAAAAGGGCTGCCAATTCTGCA ATGAGAGCAAACCTCAAGAAAGCTAAGAGGAAGTCATTGGGCGATTCTGATATTTATTTGGAGAGCAAAAGTGATGATCTTGATGTGCCCCTATCATCTA TTGAAGCTGATGAACATCGTTCTGGAAAGAAGTTATTGGATAAGATCTCCAAAAATCAGTTCCGTTATAACCCTGACAAGATAAAGGGTTCCACCATGCA CCATGCTATGAATCCAAATGACGATGATTCAGAGGATGAAGATGAGGCAGATACCCCTCTCTATGAAGAGAATTGGGTGTCGAACGATTCGCCCACCGCT TCTGGCGAGGACTCATCCAGGAAGCAAATGCAGATGAGCTTGGATGCTAATGCTACGACGGAACATTCTGATGGAAGTTCGGGTTCTTCCCAGGACACTG GCGGGCAAACTTGCCATCAATGCCGGAGGAATGACAAAGAGGGAGTTACTTGGTGCCTCCAGTGTGATAGGAGAGGTTACTGTGATAACTGTATATCTTC ATGGTACTCTGACATTTCATTGGATGAAATTCAGAGGTTATGTCCTGCGTGCCGTGGTATTTGTAATTGCAAATCTTGCTTACGTAGTGATAATTCCATA AAGGTTCGGATAAGGGAGATACCTGTTCTAGATAAGTTACAGTATCTCCACGTGCTGCTGTCATCAGTGCTTCCTGTAGTAAAGCAGATCCATCGTGAAC AGTGTTTTGAAGTTGAACTTGAAAAGAAGTTGTGTGGTGCTGAAATAGATCTTCCCAGGACAAAATTGAATGCAGATGAGCAGATGTGCTGGTACACCTA TAACACTTTCCTTATATGTGATGGATTTAGTGGGTGCTGAAGTTGTCTTTATATTCCTTATCACTAGATAGTAGAAGGGCCATTTTTATTTTATTTGTTT TCTTGCAGCAAGTTTTGTAGGATACCCATCATCGATTATCATCGACGGTGTCCAAATTGCTCGTATGATTTGTGCCTTAATTGCTGCCGAGATCTCCGAA AAGCAACTATAGATCACAATAAAGAACCCCAAACAGAGCAAGCAAAAGCTTCTGACCGAAACATATTAAGTAAATTTCCTGAGTGGAGTTCCAATGACAA TGGAAGTATTCCATGCCCCCCGAAGGACTATGGTGGCTGTGGTTATTTGTCATTAAATTTAAGCCGAATTTTCAAGAAGAATTGGGTTGCAAAATTGGTG AAAAATGTAGAGGAAATGGTTAGTAGCTGTAGGATTAACAATGCTGATGATCTACCAGAAACTGGGTTGAATGCTCTCAGAGTTTGCCAATATGCTCATA GAGAAGCTGGTGATGATAATTATCTTTATTGTCCAACATCTGAAGATCTCAAAACAGATGGGATTGACAATTTTAGAAAGCACTGGAAAAGCGGTAAACC AATTATTGTTAAGCAAGTATTTGCTACGTCATCAATCTCTAGCTGGGATCCCTTGGTCATCTGGAAAGGGATTCGTGAGACAACAGACGAAAAAATGAAA GATGAAAACAGAATTGTTAAGGCCATAGATTGCTTAGACAGGTCTGAGATTGATATCGAGCTTGGTCAGTTTATGAAAGGATACTCTGAGGGGGGTGTTC ATGAAAATGGTTGGCCACGGATATTGAAGTTGAAAGACTGGCCTTCACCAAGTGCATCTGAAGAATTTCTGTTGTACCAAAGACCTGAATTTATCAGCAA ACTGCCTTTACTTCAGTATATTCACTCCAAGTGGGGCCTTCTAAATGTTGCAGCTAAATTGCCTCATTACTCCTTGCAGAATGATGTAGGGCCCAAGATT TATATATCTTATGGGATAAGTGATGAGCTTGAGAGAGGTGATTCAGTGACAAATCTTCACTTCAATATGCGTGACATGGTGTACCTTTTGGTCCATACGA ATGAGTCAAAGCTGAAGGACTGTCAGAGAACTAATATTGAAATTATACAAAAAGATTATAAGGAACCAGATGTGAAAGAGTCACCAGGAGATCCCCAAAT ATGTCCAAAAGAGAGTTCACCTGATTCATTAGTTGGTGCCAATAATGATGGACCCGATATGGAGTCAGACCAGAATAAGTCAATTATGGATCAAGGGTCT GAATTTCATCCCAATGTTGAAGGGAATATGGTCAATGGTGAACTTCCACTTAAACAAAATGGAGATGTCTCTGAGGAAACAAATCCTGGACTTCTTTGGG ATGTCTTTCGTCGGCAGGACATCCCGAAGGTGACTGAATATTTGAAAATGCATTGGAAAGAATTTGGGAAGACAGATGATATAGTAAATGAATTTGTGAC ATGGCCTCTTTATGATGGAGCTGTTTTTCTTGACAGACACCATAAAAGCAAGTTGAAGGAAGAATTTGGTGTGGAGCCATGGTCATTTGAACAGAACATA GGGGAGGCTATATTTGTTCCTGCTGGTTGCCCTTTCCAAGCCAGAAATGTTCATTCCACTGTTCAATTGGGCCTTGATTTCTTGTCTCCGGAAAGCCTGG GGGAAGCTGTAAGATTGGCAGAGGAAGTCCGTTGTCTACCTAATGAACATGAAGCGAAACTTCAAGTATTGGAGGTTGGGAAGATATCTCTCTATGCCGC AAGTTCAGCCATCAAAGAAGTTCAGAAACTTGTACTTGACCCAAAACTTGGCTCAGAGATCGGATATGGAGATCCTAATTTGACAGCAATGGTTTCTGAG AATTACGAGAAGATGGTAAAGCGGAGGCAAATTTCTTGTGCATGAACGCCCGCATTCAACTCGGTCATTGAATCAGGAAAAAGGGATTATGTACAGTAAA GTTGTATTTAAGCAATATCATATGGGTTGGCATTTTTCAATGTAGTTGATCAAATACTCAGGTAACCCTTCAATGCGTATAGTAGATAGAAACATTTGAT TTGAGAGTCATATTGATGATAAATTGCATATATATATTTTGTATTTTATAAAGGAGAAAAGGCACATGTACTATATATACAGACTTGTTTCTGCAAGGAA GAGCCTACCTCATAGAAATTTGACTTGAGTCCTGGCCAAGCTAATTCCGGTGCCTGGGCAATTAAAGCCAAAAATGTGGTCTCAAGTCTGAAATCTAGTT CATAGTATTAAGCATTTGTGAGGGAATCCTCTCTCAAACTTGATTTTTATCAATGTGCCCTTTAGTTCATAGTATCATCTTTGGGTTTCCAAATTAGAAA TATAAGAATGCCACAAAATTTGGTCGTCTCTTTGTAAAATTCATATACTCAGTATGTTTTAGCATTTTTCATAGTCAAGGATGAAGTGAAAAATCATCTA AAATATAATCATGATGGTGGCCAACGGATGCTAATAAAGTAAGTAAAGTGAAAGTTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_21331; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_271345
| Blastp | Lysine-specific demethylase JMJ25 from Arabidopsis with 34.97% of identity |
|---|---|
| Blastx | Lysine-specific demethylase JMJ25 from Arabidopsis with 34.59% of identity |
| Eggnog | lysine (K)-specific demethylase(ENOG410XTAA) |
| Kegg | Link to kegg annotations (AT3G07610) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428336.1) |
| Pfam | JmjC domain, hydroxylase (PF02373.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |