Ll_transcript_271347

• Id Trinity: FTRINITY_DN51071_c0_g1_i2
• Name Transcript: Ll_transcript_271347
• Sequence: ATCCAAACGGCCTAACTTACCTGGGCTTCCTCTACTGCAAACTTTTCTATCACACCCAACATTCTGAATTCTAACTGGAACCACACTAAACGACGACGCC GTTGCAACAGGATTTTGTTCACTCGAATCACAACACATTGGTGGTTGTGATTCTCACTTGGGGGTTCCTTCTTTTCTGTTGGAAACTTGGAATTAATTTG GCTTGGCTACCCTTCAAAACATAATGGATCAAGCACGAACGGCCTCAGGGAACGGCGAGGACAATGTTGGGATTCCAGATGATTTGCGATGCAAGAGATC AGACGGGAAACAGTGGAGATGCACTGCAATGTCCATGCCCGATAAGACAGTGTGTGAGAAGCACTACATCCAGGCTAAGAAAAGGGCTGCCAATTCTGCA ATGAGAGCAAACCTCAAGAAAGCTAAGAGGAAGTCATTGGGCGATTCTGATATTTATTTGGAGAGCAAAAGTGATGATCTTGATGTGCCCCTATCATCTA TTGAAGCTGATGAACATCGTTCTGGAAAGAAGTTATTGGATAAGATCTCCAAAAATCAGTTCCGTTATAACCCTGACAAGATAAAGGGTTCCACCATGCA CCATGCTATGAATCCAAATGACGATGATTCAGAGGATGAAGATGAGGCAGATACCCCTCTCTATGAAGAGAATTGGGTGTCGAACGATTCGCCCACCGCT TCTGGCGAGGACTCATCCAGGAAGCAAATGCAGATGAGCTTGGATGCTAATGCTACGACGGAACATTCTGATGGAAGTTCGGGTTCTTCCCAGGACACTG GCGGGCAAACTTGCCATCAATGCCGGAGGAATGACAAAGAGGGAGTTACTTGGTGCCTCCAGTGTGATAGGAGAGGTTACTGTGATAACTGTATATCTTC ATGGTACTCTGACATTTCATTGGATGAAATTCAGAGGTTATGTCCTGCGTGCCGTGGTATTTGTAATTGCAAATCTTGCTTACGTAGTGATAATTCCATA AAGGTTCGGATAAGGGAGATACCTGTTCTAGATAAGTTACAGTATCTCCACGTGCTGCTGTCATCAGTGCTTCCTGTAGTAAAGCAGATCCATCGTGAAC AGTGTTTTGAAGTTGAACTTGAAAAGAAGTTGTGTGGTGCTGAAATAGATCTTCCCAGGACAAAATTGAATGCAGATGAGCAGATGTGCTGCAATTTTTG TAGGATACCCATCATCGATTATCATCGACGGTGTCCAAATTGCTCGTATGATTTGTGCCTTAATTGCTGCCGAGATCTCCGAAAAGCAACTATAGATCAC AATAAAGAACCCCAAACAGAGCAAGCAAAAGCTTCTGACCGAAACATATTAAGTAAATTTCCTGAGTGGAGTTCCAATGACAATGGAAGTATTCCATGCC CCCCGAAGGACTATGGTGGCTGTGGTTATTTGTCATTAAATTTAAGCCGAATTTTCAAGAAGAATTGGGTTGCAAAATTGGTGAAAAATGTAGAGGAAAT GGTTAGTAGCTGTAGGATTAACAATGCTGATGATCTACCAGAAACTGGGTTGAATGCTCTCAGAGTTTGCCAATATGCTCATAGAGAAGCTGGTGATGAT AATTATCTTTATTGTCCAACATCTGAAGATCTCAAAACAGATGGGATTGACAATTTTAGAAAGCACTGGAAAAGCGGTAAACCAATTATTGTTAAGCAAG TATTTGCTACGTCATCAATCTCTAGCTGGGATCCCTTGGTCATCTGGAAAGGGATTCGTGAGACAACAGACGAAAAAATGAAAGATGAAAACAGAATTGT TAAGGCCATAGATTGCTTAGACAGGTCTGAGATTGATATCGAGCTTGGTCAGTTTATGAAAGGATACTCTGAGGGGGGTGTTCATGAAAATGGTTGGCCA CGGATATTGAAGTTGAAAGACTGGCCTTCACCAAGTGCATCTGAAGAATTTCTGTTGTACCAAAGACCTGAATTTATCAGCAAACTGCCTTTACTTCAGT ATATTCACTCCAAGTGGGGCCTTCTAAATGTTGCAGCTAAATTGCCTCATTACTCCTTGCAGAATGATGTAGGGCCCAAGATTTATATATCTTATGGGAT AAGTGATGAGCTTGAGAGAGGTGATTCAGTGACAAATCTTCACTTCAATATGCGTGACATGGTGTACCTTTTGGTCCATACGAATGAGTCAAAGCTGAAG GACTGTCAGAGAACTAATATTGAAATTATACAAAAAGATTATAAGGAACCAGATGTGAAAGAGTCACCAGGAGATCCCCAAATATGTCCAAAAGAGAGTT CACCTGATTCATTAGTTGGTGCCAATAATGATGGACCCGATATGGAGTCAGACCAGAATAAGTCAATTATGGATCAAGGGTCTGAATTTCATCCCAATGT TGAAGGGAATATGGTCAATGGTGAACTTCCACTTAAACAAAATGGAGATGTCTCTGAGGAAACAAATCCTGGACTTCTTTGGGATGTCTTTCGTCGGCAG GACATCCCGAAGGTGACTGAATATTTGAAAATGCATTGGAAAGAATTTGGGAAGACAGATGATATAGTAAATGAATTTGTGACATGGCCTCTTTATGATG GAGCTGTTTTTCTTGACAGACACCATAAAAGCAAGTTGAAGGAAGAATTTGGTGTGGAGCCATGGTCATTTGAACAGAACATAGGGGAGGCTATATTTGT TCCTGCTGGTTGCCCTTTCCAAGCCAGAAATGTTCATTCCACTGTTCAATTGGGCCTTGATTTCTTGTCTCCGGAAAGCCTGGGGGAAGCTGTAAGATTG GCAGAGGAAGTCCGTTGTCTACCTAATGAACATGAAGCGAAACTTCAAGTATTGGAGGTTGGGAAGATATCTCTCTATGCCGCAAGTTCAGCCATCAAAG AAGTTCAGAAACTTGTACTTGACCCAAAACTTGGCTCAGAGATCGGATATGGAGATCCTAATTTGACAGCAATGGTTTCTGAGAATTACGAGAAGATGGT AAAGCGGAGGCAAATTTCTTGTGCATGAACGCCCGCATTCAACTCGGTCATTGAATCAGGAAAAAGGGATTATGTACAGTAAAGTTGTATTTAAGCAATA TCATATGGGTTGGCATTTTTCAATGTAGTTGATCAAATACTCAGGTAACCCTTCAATGCGTATAGTAGATAGAAACATTTGATTTGAGAGTCATATTGAT GATAAATTGCATATATATATTTTGTATTTTATAAAGGAGAAAAGGCACATGTACTATATATACAGACTTGTTTCTGCAAGGAAGAGCCTACCTCATAGAA ATTTGACTTGAGTCCTGGCCAAGCTAATTCCGGTGCCTGGGCAATTAAAGCCAAAAATGTGGTCTCAAGTCTGAAATCTAGTTCATAGTATTAAGCATTT GTGAGGGAATCCTCTCTCAAACTTGATTTTTATCAATGTGCCCTTTAGTTCATAGTATCATCTTTGGGTTTCCAAATTAGAAATATAAGAATGCCACAAA ATTTGGTCGTCTCTTTGTAAAATTCATATACTCAGTATGTTTTAGCATTTTTCATAGTCAAGGATGAAGTGAAAAATCATCTAAAATATAATCATGATGG TGGCCAACGGATGCTAATAAAGTAAGTAAAGTGAAAGTTAC
• Tissue: flowers
• Gene name: LI_gene_21331;
• Additional information: details;

Expression of Ll_transcript_271347

FPKM

• FPAB: 8.2
• FPNAB: 10.1
• LF1: 10.2
• LF2: 12.2
• LF3: 10
• LF4: 7.7
• UF1: 8.5
• UF2: 11.1
• UF3: 9.8
• UF4: 8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_271347

• Blastp: Lysine-specific demethylase JMJ25 from Arabidopsis with 34.59% of identity
• Blastx: Lysine-specific demethylase JMJ25 from Arabidopsis with 34.59% of identity
• Eggnog: lysine (K)-specific demethylase(ENOG410XTAA)
• Kegg: Link to kegg annotations (AT3G07610)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428336.1)
• Pfam: WRC (PF08879.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;