| Id Trinity | FTRINITY_DN51177_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_206039 |
| Sequence | AGTTGATGTTTGCGGTTTAAATTAGATAAATTTTATAAGGGAGAAAAGTGAACCAACCTTTGGCTGCACTAATAAACGTAAGGAACAACGTGCATCACTG CAATTACCATGTCAATGTTCAAAACTACATTGAGGTTTTGGTACATTAATTTTTCGCCACACCCTATTCTCCAACGTTTTTTCCAAACCTCATCTCTTGT TTCAACCTCACACAACTTCATAAAACTTCCCATACACTACTCCAACCTCTTATCTCAATGTGCTGCTTCGAAGTCCCTCATTTCAGGCATGGAACTACAT GCCCATCTCATCAAGTTTGGATTTTTCAATGACCCAAGTCTTATGAACCACTTGGTTACTATGTACTCCAAGTCCCGGCATTTCGGGTATGCCCGCAAGC TGGTTGATCATTGTACTGAACCAGATTTGGTTGTTTCTTGGTCTGCTTTGATATCTGGCTATGTGCAGAGTGGGCTTGTGGAGGAAGCCTTGTTGGCATT TAGTGACATGTCAATGTTGGGTGTTAAGTGCAATGAGTATACTTTCCCATGCGTTCTTAAGGCGTGTTCAATCAAGAAGGATTTGAACATGGGGAAGAAA ATTCATGGGATGACTTTGGTCACGGGGTTTGATTCTGATGGGTTTGTTTCTAATGCGTTGGTTGTTATGTATTCCAAATGCGGGCAACTTGGTGAGTCTA GGAAATTGTTTGGCGCAAATGTGGAGCGAAATGTTGTTTCATGGAATGCCTTGTTATCTTGTTATTTGCAGAGTGATTTCCATGTTGAAGCTTTGAATTT GTTTACAGAAATGGTTCAGAGTGGAATGAGGCCTAATGAGTTTAGCCTTTCCATCATATTGAATGCCTGCGCAGGATTGCGGGATGGCGGTCTAGGAAGG ATGGTTCATGGGATTTTGCTAAAGCTTGGACATGATTTAGATCAATTTTCTGTGAATGCGTTAGTTGACATGTATTCAAAAGGAGGGGAAATTGATGATG CAGTTGCTGTTTTTCGAGAAATTACACACCCTGATATTGTTTCTTGGAATGCAATTATTGCCGGTTGTGTTCTTCACGACCGTAATGATTTGGCTTTGAT GCTGTTAGATGAGATGAAAATATCAGGAACTTGTCCCAATATGTTTACCTTATCAAGTGCTCTGAAGGCCTGCGCTGCAATGAGGTCCAAGCAGTTGGGT AGGCAGTTACATTCTAGTTTGATAAAGATGGATACTCATTCAGATTTGTTTGTCGAAGTTGGACTAGTAGATATGTATTCCAAATGTGAAATGATGGATG ATGCAAGAAGAGCTTTTGGTTTGATGAGAAATAAGGACATTATTGCATGGAACGCCTTAATCTCGGGTTACTCAGATTGTGGTGATGACTTAGAAGCTGT CTCACTGTTTTCTGAAATGTACAATGAAGATGTAGATTTTAACCAAATTACTTTGTCAACAGTTCTTAAATCTGTGGCTGGCTTGCAGGCAATTAAAGTA TGTAAGCAAATTCACACAGTTTCTATCAAATCTGGAATTTATTCCGATTTCTATGTCATAAACAGTCTTCTTGACACATATGGAAAATGTAGTGATATAG ATGGTGCTTCAAAAATATTTGAAGAACGCACTTGGGAAGATTTGGTGGCTTACACATCCATGATAACAGCATATTTCCAATATGGGGATGGGGAGGAGGC TTTAAAGCTGTATTTGCAAATGCAAGATGCAGATATCAAGCCAGATCCATTTGTCTGCAGCTCTCTTTTAAATGCTTGTGCAAATTTGTCTGCATATGAG CAAGGGAAACAATTACATGTTCATGCTATTAAGTTTGGATTTATGTCTGATATTTTTGCCAGCAATTCTCTGGTTAACATGTATGCAAAATGTGGAAGCA TAGAGGATGCTGGCTGTGCTTTTTCCGAGATACCTACTAGAGGTATAGTCTCATGGTCTGCAATGATTGGAGGGTTAGCTCAGCATGGACATGGTAAAGT GGCTCTTCAGTTGTTCAATCAAATGATAAACGATGGTGTGCAACCCAATCATATTACTTTAGTTAGTGTTCTTTGTGCATGTAATCATGCTGGTTTGGTA AATGAGGGAAAACAATATTTTGAAACAATGGAGGAGAAGTTTGGAATTAAACCCACACAAGAGCATTATGCCTGCATGATTGATCTCCTTGGACGATCAG GGAAATTGAATGAAGCAATGGAGCTTGTAAATTCCATTCCATTTGAAGCTAATGGCTCAGTTTGGGGGGCACTTCTTGGAGCTGCAAGGATCCATAAAAA TATAGAACTTGGTCAGAAAGCTGCAGAGATGCTCTTCGCTCTTGAGCCAGAGAAATCTGGCACCCACGTTCTTCTTTCGAACATTTATGCATCGGCAGGG ATGTGGGAAAATGTTTCAAAGGTTAGAAAGCTTATGAAAGACAGCAATGTCAAGAAAGAGCCTGGAATGAGTTGGCTTGAGATCAAAGACAAGGTATACA CCTTCATTGTTGGAGATAGAAGTCATTCTAGAAGTGATGAAATATATGCTAAACTGGATCAGTTGAGTGGCCTTCTAAGTAAAGCTGGATATACTCCCCT CATAGAGATGGATATACATAATGTGAACCAAAGTGAAAAGGAACAGCTCCTATATCACCATAGTGAGAAACTTGCTGTAGCCTTTGCACTAATTGCTACA CCACCTGGAGCACCAATAAGGGTGAAGAAGAACCTACGAGTGTGTGTTGACTGCCATGCCTTTTTCAAATTTGTATGTAAAATTGTTTCAAGGGAAATTA TTGTCAGAGATATTAATAGATTCCACCACTTTAAAGATGGATCTTGTTCCTGTGGCGATTATTGGTAATGTAATCAAGATGGCTCAATCGTCCCTTTTCA CAAGATACACTGATTCTTTATCTTTGTTACTGCAATTGTTTCATAACCAAAATAGATCTGCCAATTGAAACACAGACAGATGATATTTACCTGGTTTCAC ATTGAAGAAACATATGGGAAAGGAAAGAATAATGCAATACGTTTGGCGGATGCTTGGGCATCGCATAAAATTGTGTTTATCCAGTTCATGCCACGGTTAT CACTAGAATCAAGCCTTCAAATTGTTGCTTCCTTATTGATCAGTGGCCGGACTTTCATGTCCATTTCTGCTGCTGACATGGAGTTTGCTCAGGCATGATT CCCGTTTCTGCTGAACTGGTCACAGCTGGATATTTCCGAGCATGTTGGTGGTGGAGGACAGCAGATTAGTGAAGGATATCTGGTGTCCATATAGAAAGTA TGACTTTGCTTTATTTCTTAATCTCAGTTTAGTACCAGTTTATCATATGACAGATGAGCATGTTGTCTACAATGAAGAACAACTCAACTTTTAATAAAGG ATTCTTGGCTTTTCAAGTCACGTCTCGCACTCTCGAACATGCCTCCATGTATGAGAAGCATGAACAATGGATGATTCGCTATGGCAAAGTCTATAAGGAT GCCGAAGAAAGAGAGAAGCGTTTCAGTATATTCAATGAAAATGTGAATTACATAGAAGCTTTCAATAATGCTGGGAACAAACCTTACAAGCTAGGCATTA ATCAATTTGCAGACCTCATAAATGAAGAGTTCACTGCATACAAAAATGGATTCAAAGGGTATATGAGGTCCTCAATCACAAGGACAAAGACTTTTAAGTA TGAAAATGTGACTGCAGTACCATCCACAATGGATTGGAGACAAAAAGGAGCAGTAACACCAGTCAAGGACCAAGGCCAGTGTGGATGTTGCTGGGCATTT TCTGCTGTTGCAGCAACTGAAGGAATCAATAAGTTGACAACCGGAAATTTGATCTCTTTGTCCGAACAGGAACTGGTTGATTGCGATACAAAGGGTGTTG ACCAAGGCTGTGAAGGTGGTCTGATGGATGATGCCTTCAAATTCATCATAAGTAACCATGGACTAGACACTGAAGCCAATTACCCATATCAAGGTGTTGA TGGGACATGCAATGCAAATGCAGCAGCCAACCATGCAGCTACCATTACCGGGTATGAAGATGTCCCTGCCAACGACGAGCAAGCACTGCAAAAAGCTGTG GCTAATCAACCCATTTCTGTAGCCATTGATGCTAGTGGCTCTGATTTTCAATTTTACCAAGGTGGTGTCTTCACTGGTAGCTGTGGCACGCAGTTGGACC ATGGTGTCACCGCCGTGGGTTATGGAGTTAGTGCTGATGGACTGAAATATTGGTTGGTTAAGAACTCATGGGGAGCCCAGTGGGGTGAAGAAGGATACAT TAGGATGCAAAGGGACGTGGCTGCTAATGGAGGACTTTGTGGCATAGCGATGCAGGCATCTTACCCTACTGCATAATTACAAAATTTGCATACCATGTTC CTAAAATATATACAAATATATTCTTATGTCTCAATTCCTGCTAGCAGTTGTTTATCCTCTACATGAATTAGTGTACTTATCAATCACTATATAATGGAAA ATTTGTAATAGTTATGACATTAAGGAGCATCGCCATTTCTCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_21539; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_206039
| Blastp | Pentatricopeptide repeat-containing protein At3g57430, chloroplastic from Arabidopsis with 38.44% of identity |
|---|---|
| Blastx | Pentatricopeptide repeat-containing protein At3g57430, chloroplastic from Arabidopsis with 38.44% of identity |
| Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
| Kegg | Link to kegg annotations (AT3G57430) |
| CantataDB | Link to cantataDB annotations (CNT0002198) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453668.1) |
| Pfam | PPR repeat family (PF13041.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |