Ll_transcript_206430

• Id Trinity: FTRINITY_DN51181_c0_g1_i3
• Name Transcript: Ll_transcript_206430
• Sequence: AACTCATACATGCATATAACTTCTAGAAGCAAAAAGAAATAAGATGAAAGAAAGAAGTAACCCTTTGGTATGAGGTGTTCTAAATTACTAACTCCTAACC TTTTGTATCCAAAAACATTTGGAGTGATTCAAAATAGAATTGGAGTGGGTAAATTCTCTTAACTCAAAATTGTATCTTCACATTGTTTGGTTAAGTTAGG GTTTTTCAGTTGATGAAGCAAGTGACGGCGTTGCAGTTGTTTCGTGATGTGGCCAATAAGCCCCGTTCTAGGCTCCTTGGTTTAGATGTTGGCGATAAAT ACGTTGGTCTCGCTCTTTCTGACTTCAATAATCAAATTGCTTCTCCTTTCAGTGTTCTTGTTAGGAAGAAGTCTAATATTGCTTTGATGGCTTCTGATTT TGAATGTCTCATATCTCAATATTCTTTGAAGGGCTTTGTTATTGGTATCCCTTTTGATAGACATCGTGTTTCGGCTGATGCTGTGCAAGTCAAGGCCTTC ATTAATGACCTCTCTAGTACTAAAAAGCTGCAAGGTATACCATATACATATTGGAATGAGCGCTTCACTTCTAAGAACGTGGAGTTGTTTTTAAAGCCTC TGGACTTGTATCATCCCTATCATTCCAAGACTATGCTAGACAAGTTTGCTGCTGTAGGAATACTTCAGGGGTACCTGGATTATGCTAACAGAAAGGTGAA GTTGGAAACGGAGTAAGAATCTCTTAATAGACTATGTTCTCAAGCATACCAATTGAACTCAACCTTTATTGTTTGACATGATTGTCACTCCTCAAAACTA CTCACTTGCTACACAGGTAGAGAGGCATTCTCCAGAAATCACATATACAAACCTGAGGACAAAAAAAACAAAGGCTTGAGGTTGTTCCAATTGAGCTGAA AGCTATTTTGTTAGTAGAATCAGTTAGTTCCACAAAAGTTTAAGCTCTTTTCTCCCTTGATAATATTTATGATATAGAATTTAGACATTTTTTTGTAGGA GAGCAGTCACCTAATTATTTCATCACCGTAACGTTTATTCTTTGGAAATTGTATCTCAAGTCAAGTTTTTTTTTTCTTTTCTTAATGCAAAATATTTACA ACGTTGAATCCAAATAAGATTGATTCTTATAACAACATGAAAACTGAAAAGGAGATGTGAGGTTTAGTTGTGGTACTTTACTAAGACCGTTCTCGTCTTT TGCTTTAACGTTTCTTTATATATTCAGTCTAGCTGACAAACTTATGAAAATAATTATTATAATATTACAAGAACCATTTTATTAAACAATATCTTAAGTC TGAGGGTTAAATAATCCTCAAATAAATTCTTATTAATATTTTCTTTGCCAGTAAGAATAAGGCTATACATACTTATTCTTTCTTATATCTCACGAAGTGA GAGCCTCGTATACTAACAATTATTTTAGAATATATACTTTATAAAGTATAGTAAAAATAATATATTTAGTTTTCTAGAATAAAAATCTTCCCTGGTAGAA TTAGGAAATTGTATTTTTATATCTAATGATCTTACATACAAATGGTATGATAGAGACACAATTGCATCACTTGGTGAGATCATGTGAATTTGGATCCCTG CAACTATTTTCACCCTGTCTTCATATTTTGACAGTATTTTCTTGGCTACTTTGTACTTATACAATACTGTTTTATTAAATGCTATCCGAATAAACTTACA ATTCACATGTTGATTGACTATCCAATCTTAATACCATTTATGTCCAAGTTGTCTAGCATCTTTGGTCTCTTGTAATTCTTTAACAAGAGTGAGGAACAAA CAACAGTAACAGAAGAAGCGGCCATAGCGGCTCCGGCAATCCATGGTGGTAACCTGAACCTAGTGAATGGGTAAAGGACCCCTGCAGCAATTGGAATAGC TAGAAGATTATATCCAAGAGCCCAAATGTAGTTCAGACCAATACGTGAG
• Tissue: flowers
• Gene name: LI_gene_21549;
• Additional information: details;

Expression of Ll_transcript_206430

FPKM

• FPAB: 1.3
• FPNAB: 0.3
• LF1: 0.4
• LF2: 0.7
• LF3: 0.3
• LF4: 0.5
• UF1: 0.8
• UF2: 0.9
• UF3: 0
• UF4: 0.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_206430

• Blastp: Putative pre-16S rRNA nuclease from Beijerinckia with 36.11% of identity
• Blastx: Probable copper-transporting ATPase HMA5 from Arabidopsis with 80% of identity
• Eggnog: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination (By similarity)(COG0816)
• Kegg: Link to kegg annotations (Bind_1895)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420916.1)
• Pfam: Holliday junction resolvase (PF03652.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;