| Id Trinity | FTRINITY_DN51181_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_206431 |
| Sequence | AACTCATACATGCATATAACTTCTAGAAGCAAAAAGAAATAAGATGAAAGAAAGAAGTAACCCTTTGGTATGAGGTGTTCTAAATTACTAACTCCTAACC TTTTGTATCCAAAAACATTTGGAGTGATTCAAAATAGAATTGGAGTGGGTAAATTCTCTTAACTCAAAATTGTATCTTCACATTGTTTGGTTAAGTTAGG GTTTTTCAGTTGATGAAGCAAGTGACGGCGTTGCAGTTGTTTCGTGATGTGGCCAATAAGCCCCGTTCTAGGCTCCTTGGTTTAGATGTTGGCGATAAAT ACGTTGGTCTCGCTCTTTCTGACTTCAATAATCAAATTGCTTCTCCTTTCAGTGTTCTTGTTAGGAAGAAGTCTAATATTGCTTTGATGGCTTCTGATTT TGAATGTCTCATATCTCAATATTCTTTGAAGGGCTTTGTTATTGGTATCCCTTTTGATAGACATCGTGTTTCGGCTGATGCTGTGCAAGTCAAGGCCTTC ATTAATGACCTCTCTAGTACTAAAAAGCTGCAAGAACGTGGAGTTGTTTTTAAAGCCTCTGGACTTGTATCATCCCTATCATTCCAAGACTATGCTAGAC AAGTTTGCTGCTGTAGGAATACTTCAGGGGTACCTGGATTATGCTAACAGAAAGGTGAAGTTGGAAACGGAGTAAGAATCTCTTAATAGACTATGTTCTC AAGCATACCAATTGAACTCAACCTTTATTGTTTGACATGATTGTCACTCCTCAAAACTACTCACTTGCTACACAGGTAGAGAGGCATTCTCCAGAAATCA CATATACAAACCTGAGGACAAAAAAAACAAAGGCTTGAGGTTGTTCCAATTGAGCTGAAAGCTATTTTGTTAGTAGAATCAGTTAGTTCCACAAAAGTTT AAGCTCTTTTCTCCCTTGATAATATTTATGATATAGAATTTAGACATTTTTTTGTAGGAGAGCAGTCACCTAATTATTTCATCACCGTAACGTTTATTCT TTGGAAATTGTATCTCAAGTCAAGTTTTTTTTTTCTTTTCTTAATGCAAAATATTTACAACGTTGAATCCAAATAAGATTGATTCTTATAACAACATGAA AACTGAAAAGGAGATGTGAGGTTTAGTTGTGGTACTTTACTAAGACCGTTCTCGTCTTTTGCTTTAACGTTTCTTTATATATTCAGTCTAGCTGACAAAC TTATGAAAATAATTATTATAATATTACAAGAACCATTTTATTAAACAATATCTTAAGTCTGAGGGTTAAATAATCCTCAAATAAATTCTTATTAATATTT TCTTTGCCAGTAAGAATAAGGCTATACATACTTATTCTTTCTTATATCTCACGAAGTGAGAGCCTCGTATACTAACAATTATTTTAGAATATATACTTTA TAAAGTATAGTAAAAATAATATATTTAGTTTTCTAGAATAAAAATCTTCCCTGGTAGAATTAGGAAATTGTATTTTTATATCTAATGATCTTACATACAA ATGGTATGATAGAGACACAATTGCATCACTTGGTGAGATCATGTGAATTTGGATCCCTGCAACTATTTTCACCCTGTCTTCATATTTTGACAGTATTTTC TTGGCTACTTTGTACTTATACAATACTGTTTTATTAAATGCTATCCGAATAAACTTACAATTCACATGTTGATTGACTATCCAATCTTAATACCATTTAT GTCCAAGTTGTCTAGCATCTTTGGTCTCTTGTAATTCTTTAACAAGAGTGAGGAACAAACAACAGTAACAGAAGAAGCGGCCATAGCGGCTCCGGCAATC CATGGTGGTAACCTGAACCTAGTGAATGGGTAAAGGACCCCTGCAGCAATTGGAATAGCTAGAAGATTATATCCAAGAGCCCAAATGTAGTTCAGACCAA TACGTGAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_21549; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_206431
| Blastp | Putative pre-16S rRNA nuclease from Beijerinckia with 37.08% of identity |
|---|---|
| Blastx | Probable copper-transporting ATPase HMA5 from Arabidopsis with 80% of identity |
| Eggnog | Could be a nuclease that resolves Holliday junction intermediates in genetic recombination (By similarity)(COG0816) |
| Kegg | Link to kegg annotations (Bind_1895) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420916.1) |
| Pfam | Holliday junction resolvase (PF03652.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |