| Id Trinity | FTRINITY_DN51212_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_262139 |
| Sequence | ATTGAACTTACAAAAATGGTTGATATCGATAAATGGTGTTAAAGAGGAACTAAAAGTTTGATATAAAGAGATCTATCACTGTTACAAGAAAAAAAACAAC AAAATAAGAAGAAAACGAAACGGTATTTGTTCAACCAATGACGACGGTGCCACGGAGGAGCTCCTCCTCAACCTGAATGAACCCCTTTCTCTCTCCGTTC ATCTTTACCCATTTCACCTTTCCATTAATTCAATTCTTTTTTCCCATTCTCATTCCTAACCGCATTTCGAGGCTGATAAGAAGGTGTGAGGGATTTAAAG TAGTGTGATGAGTTGTATCGAGGAAGAGGATAAGCAATGGAGTTGTGGAAAACCTGGCACTGTCAATTTGCAAAAAGTGAGTTCCATTATGCGCGACATT GGAGATCCTTGTGTTTCTCAGTCCCCTATAAAGGTTGTTATCAATGTAAACAGAATGCTTAAGCCAGACAAATGGCAAGCTATGTTTGATAGTGAAGGAA GGGTGTTTGGTTTCCGGAAGGCACTAAAGTTGATTGTGTTAGGGGGTGTAGATCCATCAATAAGATCTGAAGTTTGGGAGTTTTTATTAGGTTGTTATGC ACCAAGCAGCACTGCTGAGTATCGAAGAAGATTGAGAACAGCTAGGAGGGAACATTATAGGGACCTGATTAAGCAATGTCAATCGATGCATTCGAGTGTA GGAACTGGTTCTTTGGCATATGTTGTTGGATCCAAAGTTATGGATGTCAGGACTTCATCTAAAAATGACCGGGAAATACAAAATAAAATAGAAAGATCAA CTTCTAATGATAATAATAGTGAAGTAGGAAAATGTGAAAGGAGTATTACTTGTACAGAGGCAGGAAATATAGACGAACAGGAAAGCTCCAATGATTGGTT TGACATTGTTAATTTGAGAACAAGCACAAACAATGCAACATATGACCCATATCTGCAAGAAAACTGCAGTTCCCCAAAGTATGGGAGAGAATCAGATGGA TCACATTATGTGAATGACAGTAGTTTTGACTTTCCACCTTTACCTGTCACAAATCTGTTTGAAAAGAGTGGTAAAGATGAAAATTCAGGAATAGAGAATG GTGATAAACATTCTTCACAACATAAACAAAGATTTGAAGGTTACAGAATGCATAGTTTTCATATTGATAACAATGCAGACTTAGTTATTGATTCAAATGA TCAACACCCTCTTGCTACCTTCCATGGAATGAACTCTGAAATTGAAATTGCTTCACCTGATGAGGATGAACCAGGTTTTATGCCCAATAATAATCCAGTT TATGACATAAAGATGGTAAATCAACTAAAAATATCAGATGTATCCCACCCAACAATGATAAGCTCATCAATTTCTGAAGGATTGCCTGCCAGTGAAGATA GAGTATCAGAATGGCTTTGGACCTTGCATAGGATAGTTGTTGATGTTGTGAGGACAGACAGTCATCTTGAGTTCTATGAGGACACAAGAAATTTAGCTAG AATGTCAGATATTCTTGCTGTCTATGCATGGGTTGATCCTGCAACAGGGTATTGTCAAGGTATGAGTGATTTGCTGTCTCCCTTTGTTGTAATCTTTGAG GATGACGCAGATGCATTTTGGTGTTTTGAGATGCTTCTAAGGAGAATGAGAGAAAATTTTCAAATGGAAGGGCCAATTAGGGTGATGAAGCAGTTGCAAG AACTGTGGCATATCCTTGAAGTGTCAGATGGGGAAATGTTTGCCCACCTGTCCAAAATTGGTGCTGAAAGCCTTCATTTTGCATTTCGTATGTTGCTAGT TCTCTTTCGCAGAGAGTTGTCTTTTAATGAGGCTCTTTCAATGTGGGAGATGATGTGGGCGTCTGACTTTGATGAGTCCTTGGCCTACGATTTAGAAGAT AAATGCCTAGAAGCATTGGCCTTACATCTTTCCATAGACTCAAACAATGATATGAGAGAAGAAATTGCAAATACTGATGAGGGTAGTGTGAAGAGTGGTC CACAATCAAACCATAAGGAAAATGACAGCACAAAAGCCAGTTTACAGTCAAATCATGCAAACACAAATCACTCTGTATATGATGTCAAATTGAAGTCACT GTCATCTCATGCCTTTTGTGGCTTGGCAAGGAACATCTTTCAGAAAATTGATAGAGTCCACGTGAGAACTATTTCCTCCTTAACAAGCAAAGGAAATGAT GAGTTGTCCACATTCTGTGTCGCAGCAATTCTTGTCTTAAACCGCCAAAAGATCATTCAAGAAACAAAATCCTTTGATGATATGATAAAGATGTTCAATG ACAACGTGTTGAAGATCAAGGTAAAAAGATGCATAACCACAGCAATCAAACTCCGAAAGAAATATTTTAGCAAGGTAATCAAGAAAAAGAAGCATGTCGC AAAGAAAGGGGACTAGGGTAATATTATTTTTCAATGTACGCTTGCGGAGAAAGCACTGAATGACATCGAGTATCACTTATATGGCTCTGGTTGATGAAAT TGAAGTCTGGTGTTAACTTCTTGTTATTTATTACTTATCCACTTTTAATGGGAAGCTTTGTAGCATAAAGTGCTTTTGCTTTTGGAGGTCCGTCCTGCTG TTGTACCTCATTACTCTTTTTTGAGGTAATTTCACTTTGTTGCGTTTTAAATTTGTTTGGTGGCCTAACTTTTGGCGGTGTTGCATAGATTCATAGATGG TCTTTCCCAAGGTTCTTCTGTAATGGGTTGTACCCAATTTCTGTTCCAAAATTTGGAAGTTTGATGCGAAGATTTAAGCTAAAAAGAGACTGTTTTATCA GGCTCTCACACTGGAAGTTTTGGGTGTAACTATAAGAAATGATAAAAGAAGGCACGGTTTCAATTTAAGAACTTTATGCAATTCTGTTTTTGCTTTTGTA GCTTGTGGACGATGAAGAAAATTATGCATCCCTTGACCCATTTCCTCGGGGTTGGATGTGGATAGTGGAATGAATTCTACGTCTCTGTGATAAGGAATTC TATGACATTAAATTTTCTTGTTTCATCCCGCTAGAGAAAAAGTAGGTGTAGCACCTATTGTGGCACAAATGATAGAATTTCACCTTAATGTGGTTTGGCT TTGTGAGAGAAGATCATTAGAAACCCTATTAAATAGAGTATGTTAGGTGGAGGATAGCCCAATAGTTAAGGCTAGATGGAGATCAAGAAAAATTACAGCT GAAACCCTTAAAAAGACAGGTTTAATTGACATTTCTAAGGACGTGGTTTTATGTTAGGACACGATGACTTAGTTTGTTCCATGTAATTGATCCCACCTAG TGGTGAAAGCCTTTGTTGTTCTTTTATACCTTATGAGGGATTCATATGTTTGTCTTGTTGGACCATAGTGACTATTTTCACACGTATGTGATTTAGGTTG TTGTTTGTAAATAAAAATATTACTCTGTAATTGATTACCACCACCACCACCCAATAGCTCAATTTTCAATGCACTAGCTTCATCAGCATTTCCTCTGCCG CATTGATGATAATTTGGAAGCAATATCAATTTATTTAATTAATACTGGAATCTCGTCAGAAATTTGAATTTAGATTATTGATTTCAAGGCTATGTTTTGC AATTGGTTAGATGTAAGTTTGAATTTTGAGATTCAATACAACATATAACGTTTTTCTTCTTTTTTCCTCCCTATTTTTCCTGTTTAAGTGAGGACTTTGT TCTGTGAACAATGTACTTGTTTTCCTGTTAGGAAGGTCATGTTAAGGATTTCTTTCCCTTTAGTATTTGAATTTTTTCCATTGCTTATGTTGTGTTCTCT CATTTTCTTCTTCTTGAAGCCAGTGCAATAAAGATTGACAAGAATGGGATTTTTCATCAGTCTGGTTGCTCCAAGGTCTAATCAATTTGCAATCTTGGAT ACTTGGCACAGGTTATGCAAACAAATTTTCTTTCTTTACATGACTTTTGACTCAGGTGAGATTTCTGGTCATACATAAATCTTTTATTGCTTGGAGGATA TGGAGTCCAGAAAAAGCACATGCATACAAGAAGAGGTAGGACATGGGCAAAGCGATTATTTAGTTTTAGAGAAGGACAATCAATTTTTGTGGTGATTTAA ATTGGCAGAAGAAAGGATTCACAGTGGTTTGTACATGCTAGAAGTTTGGGGGAACTTGGACAACAGTTGTTATGAAATCGTGATTCATGTATTATTCTTT ACTTTCAGAATACAAACAACTATGTTTAAAATTAAACTGAACATGACATAATGCATAACAATCATTCCATTTCACATACTACTAATTTAGCTTGCCCTTA TTTGTGAACCGACAATGTTGGCGTATCTCTCCCTGGTTTCCTGTTAGAACATTGACATCCCCCAAGTTGTGCATTGATTCAGCAAAAGCTTTTCGGAAAT CTTCAAATCCAGCAGCAAACTCCTCAGTGATCTGCTCAGTGTCCTCACCATATAATAATTGTTGATCAATTCCCAGGACAGCATTGTGCGATAGGATCCT TTTGTAGTATGTTTCTGTAAATTTGTAACTTGATCCAGATTCTGGGTTTAGGTATACCAGTGGGTTTGGCTGGCCCTTCTTCCTTAGCGGGCATGATCTT CTCAGTGTATCTAGAAATGTGCCATTCAAGCTTGGGTCTGGTTTTCCAGTGCCCTTGTAGTTATACAGACGATCAACAATGTTGCTACATTGTGTTCTGC CCATTGAGTGTGTTCCTATGTTGATAGAAACAAACATTCATTTAGAACATATTAGTATGAAACTACTACTACATTGTAAGCTTAACTTACCTAAAAGTGT GGTCATATCTAGTACATTCAAGCCCTTTGATTTGAAGTATGCTATAGATTCCTGCCATGAGATTGATGGTAATGGCAGGTCCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_21599; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_262139
| Blastp | TBC1 domain family member 15 from Mus with 42.36% of identity |
|---|---|
| Blastx | Probable peroxidase 61 from Arabidopsis with 58.16% of identity |
| Eggnog | TBC1 domain family member(COG5210) |
| Kegg | Link to kegg annotations (66687) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458610.1) |
| Pfam | Rab-GTPase-TBC domain (PF00566.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |