Ll_transcript_262145

• Id Trinity: FTRINITY_DN51212_c0_g1_i6
• Name Transcript: Ll_transcript_262145
• Sequence: ATTGAACTTACAAAAATGGTTGATATCGATAAATGGTGTTAAAGAGGAACTAAAAGTTTGATATAAAGAGATCTATCACTGTTACAAGAAAAAAAACAAC AAAATAAGAAGAAAACGAAACGGTATTTGTTCAACCAATGACGACGGTGCCACGGAGGAGCTCCTCCTCAACCTGAATGAACCCCTTTCTCTCTCCGTTC ATCTTTACCCATTTCACCTTTCCATTAATTCAATTCTTTTTTCCCATTCTCATTCCTAACCGCATTTCGAGGCTGATAAGAAGGTGTGAGGGATTTAAAG TAGTGTGATGAGTTGTATCGAGGAAGAGGATAAGCAATGGAGTTGTGGAAAACCTGGCACTGTCAATTTGCAAAAAGTGAGTTCCATTATGCGCGACATT GGAGATCCTTGTGTTTCTCAGTCCCCTATAAAGGTAAACAGAATGCTTAAGCCAGACAAATGGCAAGCTATGTTTGATAGTGAAGGAAGGGTGTTTGGTT TCCGGAAGGCACTAAAGTTGATTGTGTTAGGGGGTGTAGATCCATCAATAAGATCTGAAGTTTGGGAGTTTTTATTAGGTTGTTATGCACCAAGCAGCAC TGCTGAGTATCGAAGAAGATTGAGAACAGCTAGGAGGGAACATTATAGGGACCTGATTAAGCAATGTCAATCGATGCATTCGAGTGTAGGAACTGGTTCT TTGGCATATGTTGTTGGATCCAAAGTTATGGATGTCAGGACTTCATCTAAAAATGACCGGGAAATACAAAATAAAATAGAAAGATCAACTTCTAATGATA ATAATAGTGAAGTAGGAAAATGTGAAAGGAGTATTACTTGTACAGAGGCAGGAAATATAGACGAACAGGAAAGCTCCAATGATTGGTTTGACATTGTTAA TTTGAGAACAAGCACAAACAATGCAACATATGACCCATATCTGCAAGAAAACTGCAGTTCCCCAAAGTATGGGAGAGAATCAGATGGATCACATTATGTG AATGACAGTAGTTTTGACTTTCCACCTTTACCTGTCACAAATCTGTTTGAAAAGAGTGGTAAAGATGAAAATTCAGGAATAGAGAATGGTGATAAACATT CTTCACAACATAAACAAAGATTTGAAGGTTACAGAATGCATAGTTTTCATATTGATAACAATGCAGACTTAGTTATTGATTCAAATGATCAACACCCTCT TGCTACCTTCCATGGAATGAACTCTGAAATTGAAATTGCTTCACCTGATGAGGATGAACCAGGTTTTATGCCCAATAATAATCCAGTTTATGACATAAAG ATGGTAAATCAACTAAAAATATCAGATGTATCCCACCCAACAATGATAAGCTCATCAATTTCTGAAGGATTGCCTGCCAGTGAAGATAGAGTATCAGAAT GGCTTTGGACCTTGCATAGGATAGTTGTTGATGTTGTGAGGACAGACAGTCATCTTGAGTTCTATGAGGACACAAGAAATTTAGCTAGAATGTCAGATAT TCTTGCTGTCTATGCATGGGTTGATCCTGCAACAGGGTATTGTCAAGGTATGAGTGATTTGCTGTCTCCCTTTGTTGTAATCTTTGAGGATGACGCAGAT GCATTTTGGTGTTTTGAGATGCTTCTAAGGAGAATGAGAGAAAATTTTCAAATGGAAGGGCCAATTAGGGTGATGAAGCAGTTGCAAGAACTGTGGCATA TCCTTGAAGTGTCAGATGGGGAAATGTTTGCCCACCTGTCCAAAATTGGTGCTGAAAGCCTTCATTTTGCATTTCGTATGTTGCTAGTTCTCTTTCGCAG AGAGTTGTCTTTTAATGAGGCTCTTTCAATGTGGGAGATGATGTGGGCGTCTGACTTTGATGAGTCCTTGGCCTACGATTTAGAAGATAAATGCCTAGAA GCATTGGCCTTACATCTTTCCATAGACTCAAACAATGATATGAGAGAAGAAATTGCAAATACTGATGAGGGTAGTGTGAAGAGTGGTCCACAATCAAACC ATAAGGAAAATGACAGCACAAAAGCCAGTTTACAGTCAAATCATGCAAACACAAATCACTCTGTATATGATGTCAAATTGAAGTCACTGTCATCTCATGC CTTTTGTGGCTTGGCAAGGAACATCTTTCAGAAAATTGATAGAGTCCACGTGAGAACTATTTCCTCCTTAACAAGCAAAGGAAATGATGAGTTGTCCACA TTCTGTGTCGCAGCAATTCTTGTCTTAAACCGCCAAAAGATCATTCAAGAAACAAAATCCTTTGATGATATGATAAAGATGTTCAATGACAACGTGTTGA AGATCAAGGTAAAAAGATGCATAACCACAGCAATCAAACTCCGAAAGAAATATTTTAGCAAGGTAATCAAGAAAAAGAAGCATGTCGCAAAGAAAGGGGA CTAGGGTAATATTATTTTTCAATGTACGCTTGCGGAGAAAGCACTGAATGACATCGAGTATCACTTATATGGCTCTGGTTGATGAAATTGAAGTCTGGTG TTAACTTCTTGTTATTTATTACTTATCCACTTTTAATGGGAAGCTTTGTAGCATAAAGTGCTTTTGCTTTTGGAGGTCCGTCCTGCTGTTGTACCTCATT ACTCTTTTTTGAGCCAGTGCAATAAAGATTGACAAGAATGGGATTTTTCATCAGTCTGGTTGCTCCAAGGTCTAATCAATTTGCAATCTTGGATACTTGG CACAGGTTATGCAAACAAATTTTCTTTCTTTACATGACTTTTGACTCAGGTGAGATTTCTGGTCATACATAAATCTTTTATTGCTTGGAGGATATGGAGT CCAGAAAAAGCACATGCATACAAGAAGAGGTAGGACATGGGCAAAGCGATTATTTAGTTTTAGAGAAGGACAATCAATTTTTGTGGTGATTTAAATTGGC AGAAGAAAGGATTCACAGTGGTTTGTACATGCTAGAAGTTTGGGGGAACTTGGACAACAGTTGTTATGAAATCGTGATTCATGTATTATTCTTTACTTTC AGAATACAAACAACTATGTTTAAAATTAAACTGAACATGACATAATGCATAACAATCATTCCATTTCACATACTACTAATTTAGCTTGCCCTTATTTGTG AACCGACAATGTTGGCGTATCTCTCCCTGGTTTCCTGTTAGAACATTGACATCCCCCAAGTTGTGCATTGATTCAGCAAAAGCTTTTCGGAAATCTTCAA ATCCAGCAGCAAACTCCTCAGTGATCTGCTCAGTGTCCTCACCATATAATAATTGTTGATCAATTCCCAGGACAGCATTGTGCGATAGGATCCTTTTGTA GTATGTTTCTGTAAATTTGTAACTTGATCCAGATTCTGGGTTTAGGTATACCAGTGGGTTTGGCTGGCCCTTCTTCCTTAGCGGGCATGATCTTCTCAGT GTATCTAGAAATGTGCCATTCAAGCTTGGGTCTGGTTTTCCAGTGCCCTTGTAGTTATACAGACGATCAACAATGTTGCTACATTGTGTTCTGCCCATTG AGTGTGTTCCTATGTTGATAGAAACAAACATTCATTTAGAACATATTAGTATGAAACTACTACTACATTGTAAGCTTAACTTACCTAAAAGTGTGGTCAT ATCTAGTACATTCAAGCCCTTTGATTTGAAGTATGCTATAGATTCCTGCCATGAGATTGATGGTAATGGCAGGTCCAC
• Tissue: flowers
• Gene name: LI_gene_21599;
• Additional information: details;

Expression of Ll_transcript_262145

FPKM

• FPAB: 0.5
• FPNAB: 0.5
• LF1: 0.5
• LF2: 0.4
• LF3: 0.1
• LF4: 0.3
• UF1: 0.9
• UF2: 0
• UF3: 0.4
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_262145

• Blastp: TBC1 domain family member 15 from Mus with 42.36% of identity
• Blastx: Probable peroxidase 61 from Arabidopsis with 58.16% of identity
• Eggnog: TBC1 domain family member(COG5210)
• Kegg: Link to kegg annotations (66687)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458614.1)
• Pfam: Rab-GTPase-TBC domain (PF00566.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;