| Id Trinity | FTRINITY_DN51221_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_261896 |
| Sequence | AATAATTTTAATTAAAAAAAGCATGAAGACTCTGTTTTTCTTATTCTCTACTAGTATCTGCTTCTTCTCATGACTTTAGCTTTGATCAAAAAGTTTCTTA CTTGATCGTTTCCTACGCCATGATTCATTGATTTGTGGTTTCTCCTCCCTTATACATTATAAAGTTTGAAACTTTCCATCATCATTGTTCAGAATTTAAA CATGGGTTCATCGGAGATTGATCAAAACGTTTCTCAATCTCTTTCTTCAAACAATCCCAACCCCATTGACCCTAGAAGTTATCAATTGGAGGTGTTTGAA GTTGCAAAGAAGAGGAATACAATAGCAGTGTTGGATACAGGTTCTGGTAAAACTTTGGTAGCAGTGATGCTCATAAAAGAAGCTTATAAAGCTATCAAGT CTAGTCACATTAAAAAGTTGATTATTTTCTTAGCTCCCACTGTTAATCTTGTCAACCAGGCTTGTTCCCTAAATTTTTCGTTTTTTTCGGCTTTTGATTC CTTTTAGTTTCATTTACATGTCGAATCTAAATGGTGTCTGTGGTTTCATTTTGCAGCAATTTAAACATATAAAAGATCTTACAGGTTTTAAAGTCGAAGA GTACTACGGGGCTAAGGGAGTGGATACATGGGATTTGAAAATCTGGGAGAAGGAGATTAGTGAAAATGATGTACTGGTTATGACACCCCAGATTCTTTTG GATGCTTTAAGAAAGGCATTCTTAAGTATAGAAATGATATGCTTGATGATTATGGATGAATGTCATAGAGCAACCGGCAAACATCCCTATTCAAAAATAA TGGAAGAGTTCTATCACAAAGCTAATGAAAAGCCAAAGATTTTTGGGATGACAGCATCACCAGTAGGTAAAAAAGTCGGTGTTTCCTCTACCAAGGGTTG TGAGGGTCAAATATCAGAACTTGAATACATCTTGGATTCTCGGAGATATACTGTTGAAGATAGGAAAGAAATAGATATACATATCCCTTCTGCAAAAGAG AGTTGTAGATATTATGACCAAGCACAATACCCTGTGTTGAGGTTGAAGTTAAAGATTGAAGCCTTGTTCGAGTCCAATGCATTGTTCTCAGAATTGCGAA GTTTGGCGCAAAGTGAGGATGTGGATTATAAATTTAAGAAACTGCATAATGGGATGTTCAATAAACTTGAAAAAATCTTATATTGCCTTGAAGACCTTGG ATCCATATGTGCTTATGAGGCTGCACAAATGTATCACGAAAGTTTCTCCAAAATTATAGGAGGCTGTGAAGTTTACAGAAATGCTTCTCTCAAATGTAAA TTTTTTATGGAAAAAGTAATGCAATTAATTGAAGAATCCCTCCATCTCGATGACAAAAAGAATTCGGAGGTTGAATTTGATTATTCAAAGGCAGTAGAGT TGAGACACATATCTCCAAAATTACTTGAACTTATTAAAATCTTCCAGTCACTTGGAGAATCTAGTCAGATGTCGTGTCTCATTTTTGTTGAAAGAAAACT TACAGCTAAGTTAATGGAAAAATTTGTAAAGAAAGTATCCCATATATCTCATTTCACAGTTTCCTATATAACCGGAGGCAATACTGCAGTTGATGCGCTG TCTCCTAAGAAGCAGAAGGAGATATTGGATTCTTTCCGCTCTGGAGGGGTCAATCTATTAATTACTACTGATGTAGCTGAGGAAGGAATTGATGTGCCAA ACTGCTCTTGTGTGATACGTTTTGACCTACCCAAGACAGTTCGTAGTTATGTCCAATCTCGGGGAAGATGTAGGCAGCCTAACTCCCAATTTATTGTGAT GTTGGAGAGGGGAAACTTGAAGCAAAGAAATCAACTTTTTGACATCATCAGGAGTGAGCGCTCCATGACTAATGCAGCTACTAATAAAGACCAGAATGCT TCTAATTTAAGGGTGTTTACTGTAGGGAAAACAAATGCATACCATGTGAATTCTACTGGAGCATCAGTCACTTTAGATTCTAGTGTTGGACTTATAAATC GATACTGTGAAAAGCTACCACATGATAAGTACTCCCGTGTGAAGCCCACTTTTGAGTTTCAGCCTATGGGAGGGGGTTACGCATGTAAGTTAACATTGCC GCCTAATGCAGCTTTCCAAATAATAGTTGGTCCCTCAGGAAAAGATGTTCATTTGGCAAGGCATCTTGTATGTTTAGAAGCTTGTAAGAAGCTGCATCAA ATGGGCGCCTTAAATGATCATCTTGTCCCTCTCATTAAAGAAGAGCCTTTAGAAACTGATTGTATTGTGAAAAACAAAGAATCAAGTTCAGGTCCAGGAA GTGGAACCACAAAAAGAAAGGAGTTACATGGCACAACCAGCATTCGTGCGTTATGTGGTACATGGGGAGACAAACTTGATGACACGAAATTTCATGCCTA TAAGTTTGATTTCACATGTAATATTGTCAGTGAAATTTACTCCGGGTTTGTTCTTCTGGTTGAGTCAAAGCTTGATGATGATGTGGGAAATATGGAGGTA GATCTTTATTTAATCTCAAAGATGGTGAAGGCTTCTGTCTATTCACGTGGGCAAGTTGACCTGGATGCTGAACAGATGATGAATGCTAAATGCTTCCAAG AGTTTTTTTTCAATGGTTTGTTTGGGAGGTTGGTTCTTCGGTCTAAATCAGCAGCAAGGGGAGGAAGGGAGTTTTTACTTCAAAAAGACACAAATACGTT ATGGAACCCAACATACATGTTTTTGCTTCTACCACTTGAGAAACTGAATGATTCATGTATGGGATCATTGACAATAAATTGGTCTGGAATCAAATCTTGT GCTTCTGCTATTGGGTTTTTAAGGAAGAAGTTTTTGTTGGTTGCTGGAGATTGTTGCAATGATAGTGATGACACAAAAATCACGTCACCTTGTGATACCA GTCCAATGGAGGTGGAAAGTCAAGATAAAAATAACATTTACTTTGCTAATTGTATGCTTGATGTTAATAATCTAAAAGACGTGGTAGTTTTGGCCATTCA TACTGGCAGAATCTATTGTATTGTTGAATTAGATATCAACCTATCCGCTGAAAGTCCCTTCGATGGCAACGATGAAAAGTCTGGGGGTGAACAAATAACA TTCGCAGATTACTACAAAAAAAGGTATGGCATTACGCTGAGACATCCAGGGCAACATTTGTTACGTTTGAAGCAAAGTCATAATGCACACAATCTTCTTT TGAACTTCCACGAGGAAGATGGTCGGGACAAGGCATCACAAACTGGGCAGGCACAATCAAAGATGCCTGCCCATGTTTACATTCCACCTGAGCTTCTCTA TGTTCTTGATGTTAAAAGAGACGTTTTGAGGTCAATGTACTTGCTACCATCACTGATGCATCATCTTCAATCGTTCATGTTATCCAGTCAGCTTAGAGAA GAGATAGGTGGCCAAACTAACAATTTCAACATTCCTAGCGCTCTGATTCTAGAAGCACTTACAACTTTAAGATGTGCTGAAAAATGTTCAATGGAACGTC TTGAGTTACTTGGAGATTCTGTTCTAAAATATGCGGTGAGCTGTCACCTCTTTCTTAAATATCCTAAGAAACATGAAGGACAATTATCTGGCATGCGATC ACTGGCTGTCTGTAATTCAACCCTACATAAACGGGCAACAGATCACAAACTGCAGGAGTATATCCGAGACTCAGCATTTGAGCCACGCCGTTGGGTTGCT CCAGGACAGATATCTATACACCCCGTTTGTTGTGAATGTGGGTTGGAAACACAAGAAGTGCCTTTAGATGGAAAGTTCCATACTGAAGATCCGAAAGTTG TGGTTGGGAAGTTATGTGACAAGGGTCACCGCTGGATGTGTTCAAAGACCATTGCTGATTGTGCTGAAGCTCTGATAGGAGCATACTATGTGGGTGGTGG ATTAATTGCTGCACTTCACGTGATGAAGTGGCTTGGGATTGATGCTGAACTTGAACCTTCTTTGGTTGATGAAGCCATAACTGCTGCGTCTCTCCATGCA TATGTGCCAAAAGTTGAAGAGATTGGAAGCCTTGAAATGAAAATTGGCTATGAATTTTCCATCAAGGGACTCTTACTGGAGGCAATGACACATGTATCCG GGAAAGAAGTTGGGATTAGCTGCTGTTATGAGAGGCTTGAATTTCTTGGTGACTCAGTACTGGACCTGCTTATCACACGCCATCTTTATCAGAGCCACAC AGATATTGATCCAGGAGAATTGACTGACTTGCGTTCAGCTTCTGTCAGTAATGAAAATTTTGCTCAAGTTGCTGTAAGAAGAAACCTTCATCTGCACCTT TTGCATGGCTCAGAATTATTGCTGAGCCAGATCGCAGATTATGTAAAAGTCATTTCTGAATCAGAGAACAATACTAGATCATTCCAAGGCATTAGAGCTC CCAAGCCACTTGGAGATCTAGTCGAAAGTATTGCTGGGGCTATGCTAATTGATACCAAGCTCAATGTTGACCAAGTGTGGAAAGTTTTCAACCCTTTGCT ATCTCCAATTGTTACACCTGATAAACTTGAACTGCCTCCGTGGCGTGAATTAAATGAATTATGTGACTCTCTCCGGTGTTTTGTGAAAGAAAGTTGTGTA AAGAAAGGACCCATGGTGCATGCCACCCTTAGTGTGCAGTTGCATGATACCTTGTTGGTTCGAGAGGGAAAGGGGCAAAATGCAAAAACTGCAAAAGGAG ATGCCGCTCTTCATTTGTTAAAGGACCTTGAGAAGAGAGGAATTTCATATAGCAGTAGCGTCTCAAAGAGAAAACGAGATGCTTCTGGTCTTACTGATGA AAACTCCCTGAAGCCAGTTGCACAGTTAGAATATAAAAGGCAGAAAGTGGATGAAACTAACTTAACTGCGAATGCACATACTGGTTTGCTGCCTCTCAAA GACACTTCCATGGAAGCCTCTAACCTTGGTGCTTCTGTTCCAGGTTTTGCACAATCACTTTTGTTCTGAGTTTGATACTGAGCCTTGTCTTCCCAATGAC ATAATGTTTACTTCTAGGAGAATTTTTCTTATCGCTTTTGCTTCTTCATTTAGTGCGTAGGTCACTCATTCTCTTCACCCCTTACCTTCTACGTCCCTTT CTTTCTCCATCAACGGAAGCATTCATGGTCTCACATGTTCAGTGTTTCGAGATTTTGAGAAGAAAATGACACGGAAATTGGAGCATACTGAAGTGCTATG GTTATTTACAATCTTGCATGCAATTATTGTATGCCCCGTTTTAGCAATGCATATACTTCTGGCAGGTTTTAAAATTGTCATGAAGAGCTGAAAATATCAG TTCCAGTTCAGTGAGTCATCTGAGTTATTTCAGTGATCACTCTCCTGCTTTAACATCTAAAATCAATAATAAATACTGCTGACAGTGTTGTTAGAAGCTT CTTTGGTTGACATTCAATTCAGATATAATACATCACTATATTCGTTGATTCCTTGCCATTATTTATTCCGGGTCAGGGAGTTAATTTTCAAAACTACCTG TCAATTAACTTCATTGTGGATTCATGTTTATCAGTTATTGGCTCAATTAATATGAAGAAGGGAGGACCTCGGAGCGCACTATATGAACTGTGCAAGAGAC TGCAGTGGCCATTGCCTGAATTTGATTCAACAGAATATAAGGATAGAACTCTATTCCAAGGGTGTGAAGGTCTGGAAGGAAGCAAGGGACAAAACTGTTT CGTGTCGAAAATTAGCTTATGCATACCCAATGGCACCGCTCTAGAATGCGAAGGAGAAGCTAGACCTGATAAGAAGACCTCACATGACTCTGCTGCACTT CAAATGCTTTATGAGCTACAAAGGCTGGGAAGACTTAAGATAACTGATTCACCTACCCTTTCTGTTTCTTCAAAGTAAAAATGATTAGCCTTTGTTTTTA CAGGTTTGGATTGAGTACAAAGGAAGGAACATGAATAACTAGTATCATGACTTTGTGGCCACAAAATACACTATGTTTTGTGCCATTGATCTGAACAATT GTCTCAGATCAATGGTACAATATCATAGGTTATATTTGTGGGTGCAAACTTGTGGCACTAGTATTAGTATTACAAAATAAGTATAAAAAATGACCCGAGA CAAAAATGGAAAAAAGTTTACTTTAGGTGTTTTAATATAATTCCTCTACAAAGAGGGTTAATTTATAAAACTGCATGTTCAATGTGACTTGACTTTCATG CAATAATATTGCATGTCCTTCCTATTAGTAGCATTTCTTAATGTACACTTTGTTTACTTTGATGAATTTTTTTTATCCTAAACCATAAACCTTGGACACA TTGCTTTAAATGAAGGAGGCTGATTCGCTTAGCACTTTAATTCGTCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_21612; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_261896
| Blastp | Endoribonuclease Dicer homolog 3a from Oryza sativa with 50.42% of identity |
|---|---|
| Blastx | Endoribonuclease Dicer homolog 3a from Oryza sativa with 50.42% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (4324864) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435974.1) |
| Pfam | Type III restriction enzyme, res subunit (PF04851.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |