| Id Trinity | FTRINITY_DN51221_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_261898 |
| Sequence | AATAATTTTAATTAAAAAAAGCATGAAGACTCTGTTTTTCTTATTCTCTACTAGTATCTGCTTCTTCTCATGACTTTAGCTTTGATCAAAAAGTTTCTTA CTTGATCGTTTCCTACGCCATGATTCATTGATTTGTGGTTTCTCCTCCCTTATACATTATAAAGTTTGAAACTTTCCATCATCATTGTTCAGAATTTAAA CATGGGTTCATCGGAGATTGATCAAAACGTTTCTCAATCTCTTTCTTCAAACAATCCCAACCCCATTGACCCTAGAAGTTATCAATTGGAGGTGTTTGAA GTTGCAAAGAAGAGGAATACAATAGCAGTGTTGGATACAGGTTCTGGTAAAACTTTGGTAGCAGTGATGCTCATAAAAGAAGCTTATAAAGCTATCAAGT CTAGTCACATTAAAAAGTTGATTATTTTCTTAGCTCCCACTGTTAATCTTGTCAACCAGCAATTTAAACATATAAAAGATCTTACAGGTTTTAAAGTCGA AGAGTACTACGGGGCTAAGGGAGTGGATACATGGGATTTGAAAATCTGGGAGAAGGAGATTAGTGAAAATGATGTACTGGTTATGACACCCCAGATTCTT TTGGATGCTTTAAGAAAGGCATTCTTAAGTATAGAAATGATATGCTTGATGATTATGGATGAATGTCATAGAGCAACCGGCAAACATCCCTATTCAAAAA TAATGGAAGAGTTCTATCACAAAGCTAATGAAAAGCCAAAGATTTTTGGGATGACAGCATCACCAGTAGGTAAAAAAGTCGGTGTTTCCTCTACCAAGGG TTGTGAGGGTCAAATATCAGAACTTGAATACATCTTGGATTCTCGGAGATATACTGTTGAAGATAGGAAAGAAATAGATATACATATCCCTTCTGCAAAA GAGAGTTGTAGATATTATGACCAAGCACAATACCCTGTGTTGAGGTTGAAGTTAAAGATTGAAGCCTTGTTCGAGTCCAATGCATTGTTCTCAGAATTGC GAAGTTTGGCGCAAAGTGAGGATGTGGATTATAAATTTAAGAAACTGCATAATGGGATGTTCAATAAACTTGAAAAAATCTTATATTGCCTTGAAGACCT TGGATCCATATGTGCTTATGAGGCTGCACAAATGTATCACGAAAGTTTCTCCAAAATTATAGGAGGCTGTGAAGTTTACAGAAATGCTTCTCTCAAATGT AAATTTTTTATGGAAAAAGTAATGCAATTAATTGAAGAATCCCTCCATCTCGATGACAAAAAGAATTCGGAGGTTGAATTTGATTATTCAAAGGCAGTAG AGTTGAGACACATATCTCCAAAATTACTTGAACTTATTAAAATCTTCCAGTCACTTGGAGAATCTAGTCAGATGTCGTGTCTCATTTTTGTTGAAAGAAA ACTTACAGCTAAGTTAATGGAAAAATTTGTAAAGAAAGTATCCCATATATCTCATTTCACAGTTTCCTATATAACCGGAGGCAATACTGCAGTTGATGCG CTGTCTCCTAAGAAGCAGAAGGAGATATTGGATTCTTTCCGCTCTGGAGGGGTCAATCTATTAATTACTACTGATGTAGCTGAGGAAGGAATTGATGTGC CAAACTGCTCTTGTGTGATACGTTTTGACCTACCCAAGACAGTTCGTAGTTATGTCCAATCTCGGGGAAGATGTAGGCAGCCTAACTCCCAATTTATTGT GATGTTGGAGAGGGGAAACTTGAAGCAAAGAAATCAACTTTTTGACATCATCAGGAGTGAGCGCTCCATGACTAATGCAGCTACTAATAAAGACCAGAAT GCTTCTAATTTAAGGGTGTTTACTGTAGGGAAAACAAATGCATACCATGTGAATTCTACTGGAGCATCAGTCACTTTAGATTCTAGTGTTGGACTTATAA ATCGATACTGTGAAAAGCTACCACATGATAAGTACTCCCGTGTGAAGCCCACTTTTGAGTTTCAGCCTATGGGAGGGGGTTACGCATGTAAGTTAACATT GCCGCCTAATGCAGCTTTCCAAATAATAGTTGGTCCCTCAGGAAAAGATGTTCATTTGGCAAGGCATCTTGTATGTTTAGAAGCTTGTAAGAAGCTGCAT CAAATGGGCGCCTTAAATGATCATCTTGTCCCTCTCATTAAAGAAGAGCCTTTAGAAACTGATTGTATTGTGAAAAACAAAGAATCAAGTTCAGGTCCAG GAAGTGGAACCACAAAAAGAAAGGAGTTACATGGCACAACCAGCATTCGTGCGTTATGTGGTACATGGGGAGACAAACTTGATGACACGAAATTTCATGC CTATAAGTTTGATTTCACATGTAATATTGTCAGTGAAATTTACTCCGGGTTTGTTCTTCTGGTTGAGTCAAAGCTTGATGATGATGTGGGAAATATGGAG GTAGATCTTTATTTAATCTCAAAGATGGTGAAGGCTTCTGTCTATTCACGTGGGCAAGTTGACCTGGATGCTGAACAGATGATGAATGCTAAATGCTTCC AAGAGTTTTTTTTCAATGGTTTGTTTGGGAGGTTGGTTCTTCGGTCTAAATCAGCAGCAAGGGGAGGAAGGGAGTTTTTACTTCAAAAAGACACAAATAC GTTATGGAACCCAACATACATGTTTTTGCTTCTACCACTTGAGAAACTGAATGATTCATGTATGGGATCATTGACAATAAATTGGTCTGGAATCAAATCT TGTGCTTCTGCTATTGGGTTTTTAAGGAAGAAGTTTTTGTTGGTTGCTGGAGATTGTTGCAATGATAGTGATGACACAAAAATCACGTCACCTTGTGATA CCAGTCCAATGGAGGTGGAAAGTCAAGATAAAAATAACATTTACTTTGCTAATTGTATGCTTGATGTTAATAATCTAAAAGACGTGGTAGTTTTGGCCAT TCATACTGGCAGAATCTATTGTATTGTTGAATTAGATATCAACCTATCCGCTGAAAGTCCCTTCGATGGCAACGATGAAAAGTCTGGGGGTGAACAAATA ACATTCGCAGATTACTACAAAAAAAGGTATGGCATTACGCTGAGACATCCAGGGCAACATTTGTTACGTTTGAAGCAAAGTCATAATGCACACAATCTTC TTTTGAACTTCCACGAGGAAGATGGTCGGGACAAGGCATCACAAACTGGGCAGGCACAATCAAAGATGCCTGCCCATGTTTACATTCCACCTGAGCTTCT CTATGTTCTTGATGTTAAAAGAGACGTTTTGAGGTCAATGTACTTGCTACCATCACTGATGCATCATCTTCAATCGTTCATGTTATCCAGTCAGCTTAGA GAAGAGATAGGTGGCCAAACTAACAATTTCAACATTCCTAGCGCTCTGGTTTGTCCTATATAGTCCAATTATGTGGATAAGATACTTCGTTTATTTTCCG TGTTCATTATGATAATCTTATGCTTCTTTCCTTTTTACCTAAGTTAGATTCTAGAAGCACTTACAACTTTAAGATGTGCTGAAAAATGTTCAATGGAACG TCTTGAGTTACTTGGAGATTCTGTTCTAAAATATGCGGTGAGCTGTCACCTCTTTCTTAAATATCCTAAGAAACATGAAGGACAATTATCTGGCATGCGA TCACTGGCTGTCTGTAATTCAACCCTACATAAACGGGCAACAGATCACAAACTGCAGGAGTATATCCGAGACTCAGCATTTGAGCCACGCCGTTGGGTTG CTCCAGGACAGATATCTATACACCCCGTTTGTTGTGAATGTGGGTTGGAAACACAAGAAGTGCCTTTAGATGGAAAGTTCCATACTGAAGATCCGAAAGT TGTGGTTGGGAAGTTATGTGACAAGGGTCACCGCTGGATGTGTTCAAAGACCATTGCTGATTGTGCTGAAGCTCTGATAGGAGCATACTATGTGGGTGGT GGATTAATTGCTGCACTTCACGTGATGAAGTGGCTTGGGATTGATGCTGAACTTGAACCTTCTTTGGTTGATGAAGCCATAACTGCTGCGTCTCTCCATG CATATGTGCCAAAAGTTGAAGAGATTGGAAGCCTTGAAATGAAAATTGGCTATGAATTTTCCATCAAGGGACTCTTACTGGAGGCAATGACACATGTATC CGGGAAAGAAGTTGGGATTAGCTGCTGTTATGAGAGGCTTGAATTTCTTGGTGACTCAGTACTGGACCTGCTTATCACACGCCATCTTTATCAGAGCCAC ACAGATATTGATCCAGGAGAATTGACTGACTTGCGTTCAGCTTCTGTCAGTAATGAAAATTTTGCTCAAGTTGCTGTAAGAAGAAACCTTCATCTGCACC TTTTGCATGGCTCAGAATTATTGCTGAGCCAGATCGCAGATTATGTAAAAGTCATTTCTGAATCAGAGAACAATACTAGATCATTCCAAGGCATTAGAGC TCCCAAGCCACTTGGAGATCTAGTCGAAAGTATTGCTGGGGCTATGCTAATTGATACCAAGCTCAATGTTGACCAAGTGTGGAAAGTTTTCAACCCTTTG CTATCTCCAATTGTTACACCTGATAAACTTGAACTGCCTCCGTGGCGTGAATTAAATGAATTATGTGACTCTCTCCGGTGTTTTGTGAAAGAAAGTTGTG TAAAGAAAGGACCCATGGTGCATGCCACCCTTAGTGTGCAGTTGCATGATACCTTGTTGGTTCGAGAGGGAAAGGGGCAAAATGCAAAAACTGCAAAAGG AGATGCCGCTCTTCATTTGTTAAAGGACCTTGAGAAGAGAGGAATTTCATATAGCAGTAGCGTCTCAAAGAGAAAACGAGATGCTTCTGGTCTTACTGAT GAAAACTCCCTGAAGCCAGTTGCACAGTTAGAATATAAAAGGCAGAAAGTGGATGAAACTAACTTAACTGCGAATGCACATACTGGTTTGCTGCCTCTCA AAGACACTTCCATGGAAGCCTCTAACCTTGGTGCTTCTGTTCCAGGTTTTGCACAATCACTTTTGTTCTGAGTTTGATACTGAGCCTTGTCTTCCCAATG ACATAATGTTTACTTCTAGGAGAATTTTTCTTATCGCTTTTGCTTCTTCATTTAGTGCGTAGGTCACTCATTCTCTTCACCCCTTACCTTCTACGTCCCT TTCTTTCTCCATCAACGGAAGCATTCATGGTCTCACATGTTCAGTGTTTCGAGATTTTGAGAAGAAAATGACACGGAAATTGGAGCATACTGAAGTGCTA TGGTTATTTACAATCTTGCATGCAATTATTGTATGCCCCGTTTTAGCAATGCATATACTTCTGGCAGGTTTTAAAATTGTCATGAAGAGCTGAAAATATC AGTTCCAGTTCAGTGAGTCATCTGAGTTATTTCAGTGATCACTCTCCTGCTTTAACATCTAAAATCAATAATAAATACTGCTGACAGTGTTGTTAGAAGC TTCTTTGGTTGACATTCAATTCAGATATAATACATCACTATATTCGTTGATTCCTTGCCATTATTTATTCCGGGTCAGGGAGTTAATTTTCAAAACTACC TGTCAATTAACTTCATTGTGGATTCATGTTTATCAGTTATTGGCTCAATTAATATGAAGAAGGGAGGACCTCGGAGCGCACTATATGAACTGTGCAAGAG ACTGCAGTGGCCATTGCCTGAATTTGATTCAACAGAATATAAGGATAGAACTCTATTCCAAGGGTGTGAAGGTCTGGAAGGAAGCAAGGGACAAAACTGT TTCGTGTCGAAAATTAGCTTATGCATACCCAATGGCACCGCTCTAGAATGCGAAGGAGAAGCTAGACCTGATAAGAAGACCTCACATGACTCTGCTGCAC TTCAAATGCTTTATGAGCTACAAAGGCTGGGAAGACTTAAGATAACTGATTCACCTACCCTTTCTGTTTCTTCAAAGTAAAAATGATTAGCCTTTGTTTT TACAGGTTTGGATTGAGTACAAAGGAAGGAACATGAATAACTAGTATCATGACTTTGTGGCCACAAAATACACTATGTTTTGTGCCATTGATCTGAACAA TTGTCTCAGATCAATGGTACAATATCATAGGTTATATTTGTGGGTGCAAACTTGTGGCACTAGTATTAGTATTACAAAATAAGTATAAAAAATGACCCGA GACAAAAATGGAAAAAAGTTTACTTTAGGTGTTTTAATATAATTCCTCTACAAAGAGGGTTAATTTATAAAACTGCATGTTCAATGTGACTTGACTTTCA TGCAATAATATTGCATGTCCTTCCTATTAGTAGCATTTCTTAATGTACACTTTGTTTACTTTGATGAATTTTTTTTATCCTAAACCATAAACCTTGGACA CATTGCTTTAAATGAAGGAGGCTGATTCGCTTAGCACTTTAATTCGTCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_21612; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_261898
| Blastp | Endoribonuclease Dicer homolog 3a from Oryza sativa with 47.37% of identity |
|---|---|
| Blastx | Endoribonuclease Dicer homolog 3a from Oryza sativa with 49.52% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (4324864) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435974.1) |
| Pfam | DEAD/DEAH box helicase (PF00270.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |