Id Trinity | FTRINITY_DN51227_c0_g1_i1 |
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Name Transcript | Ll_transcript_262052 |
Sequence | ATATATACACGAATCCATCCTGTGCCCTAAATTCATAAAAGGGATAAAAGCTAATCCAAATATCCTAACTCCATTTTCATCCATGGCGTCTTCATTTTCA ATCGCAACACCAACAACTCTGACAAATGTTCCAGAACTCATAATCAGAAACAGAGCTTGTTTCAACCGTAACCCTAACGTTTCAATGCGAGGGTTTCATA ACCAACCCCGTCTCAATCTGAATCTGAACACGAATGGTCGTTCACCAACACTGAGAAACAAGGGTTTCTCTTCTTTGGTAGTTAGGGCGAGTACGGAAGA AGCAGTAGTTCCACAATCGAAAGTGACTCACAAAGTATACTTCGATATCAGTATCGGAAATCCAGTTGGTAAGCTTGCTGGAAGGATTGTGATTGGGTTG TTCGGTGACGATGTGCCGCAAACCGTAGAGAATTTCCGTGCTCTTGCCACCGGAGAAAAGGGTTTTGGTTACAAGGGTTCTGCGTTCCACCGTGTTATCA AGGATTTCATGATTCAAGGAGGCGATTTTGACAAGGGAAATGGTACTGGAGGCAAAAGTATATATGGTCGTACTTTCAAAGATGAGAACTTTAAATGTGA GTTTACACACTCTTGCTAACTTCAACATTACATGACTGTCTTTGTTCTTGCTATATATTTAACCACTTCAACATTACATAATCGCTTAAAAGTGTTCAAT ATTTCTTTAATGAAGAAGTGATGTAAACTCCGTGTCTCGTGTTACTCGTGTTTGACATAGTGTTTTAAGCACTTAACAGATTATTGCTTTAAGTCTTCAA TACACATCAACAGAAAATTTCAACATTGTCTTACTTGTCTTGATTTTTTAATGGGATTATTGGACATTTTCTGTGCTTAAATGTTGTCATTTTCAGTTTG AGGATATTTTCATTTTCTTGTATTCTTATATTAAATATTCAGCTGAAGTTTTATTGTTTTAAATATAATGCTGATATATAGAATATATGTAGTGACTCAT ACTGGACCGGGAATTâBLAST |
Tissue | flowers |
Gene name | LI_gene_21624; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_262052
Blastp | Photosynthetic NDH subunit of lumenal location 5, chloroplastic from Arabidopsis with 84.76% of identity |
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Blastx | Photosynthetic NDH subunit of lumenal location 5, chloroplastic from Arabidopsis with 84.76% of identity |
Eggnog | PPIases accelerate the folding of proteins (By similarity)(ENOG410Z0G4) |
Kegg | Link to kegg annotations (AT5G13120) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428470.1) |
Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (PF00160.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |