Ll_transcript_261469

• Id Trinity: FTRINITY_DN51228_c0_g4_i1
• Name Transcript: Ll_transcript_261469
• Sequence: ACCGACCTTCTCATGGCCACTCCGAAATACGTTCCCCACATAGATATGTCATATGACCAATTATATATCCCACAACCAGAATTAATTTCAAGTTAAGAGT ACCTCAGTGAAAACACGCCTAAATTCATTTTTGGATTTAAAAAAATTTAAAACGAGAGAAAGAAAAAAGAAATGAGAGCTTCTCTGTGTGTTAAACCCTA ACTCCTAACCCTAACTCATCTCACACGCTCACAGTCACATTCAACCATGCCTCTCCTCTCAAATTCCAAGCTTCTCCGTTGGAAACCTTCTCTTCCTCCT TTCATCCCCAAGCCCTCCTTCCCCTTCTCCACCTCCAATGCCCAGCCTCTCTCCGAACCCGAACCCGAACCACTCCCTCCCCAAACCCAACCCCAACCCA CGCAACGCACCGTTTCAACCAGACCTCAAAATCAGCAAGAGAACCCCGAGTCTATTATCTGCAGGATGATGGCGAACCGGGCCTGGACCACCCGTCTTCA AAACTCGATCCGGTCCATCGTCCCCCGGTTCGATCCATCCCTTGTCTTCAACGTCCTCGACGGCGCCAAAAGCCCTGATCACGCTCTTCAGTTCTACCGC TGGGTCGAACGGGCCGGGCTTTTCACCCACGATAGGGACACCACTCTCAAAATGATCCAAATCCTCGGTAGTTACTCCAAACTTAACCACGCCAGATGCA TTCTCCTCGAAGATGCACCGAAGAGAGGCGCTGTCGTTGATGAAGACATGTTTGTTGTCTTGATTGATAGCTATGGCAGAAGTGGGATTGTTCAGGAGAC CGTTAAGATTTTCCAGAAGATGAAGGAGTTGGGGGTTGAGAGGACCGTGAAGTCTTATGACACATTCTTCAAGGCGATTTTGAAGAGGGGGAGGTACATG ATGGCGAAAAGGTATTATAATTTGATGCTTAGGGAAGGGGTAGAGCCGACTCGGAATACATATAATATACTGCTTTGGGGTATGTTTTTGTCAATGAAAT TGGATACTGCTGTTAGATTGTACGGTGATATGAAAAATAGGGGAATTGTACCTGATGTAGTGACTTACAATACTTTGATTAATGGTTATCATCGGTTCAA GAAGGTGGAGGAAGCCGAAAAGTTGTTTGTAGAGATGAAGGGGAACGATATACTGCCAGATGTGATTAGTTATAATACTATGTTAAAAGGGTATTTTGCA GTAGGGCAGGTTGATGATGCGCTTAAGCTTTATGAGGAGTTGAAAGGTGTTGGCATCAAATCAAATGCAATTACTTTTACAACACTGTTGCCAGGGCTTT GCGATGCAGGGAAAATTGCTGAAGCTCAGAATGTTTTGGGGGAGATGGTGGAGAAATATATTGCTCCTAAGGATAATACTATTTTCATGAAACTGATTAC TTGCCAGTGTAATGCTGGTGACTTGGATGCAGCTGCAGGTGTTCTGAAAGCGATGATACGTTTGAGAATTCCCACAGAAGCTGGTCATTATGGCATTCTA ATTGAGAATTTCTGCAAGGCTGATATATATGACAAGGCAGTCAAATTGTTAGACAAGTTGATTGAGAAGAACATCATCTTGAGGCCAAAGAGTACTTTTG AAATTGAAGCTAGTGCTTATAACCCGATGATTCAGTATCTGTGTGATAATGGGCAGACAGTTAAAGCAGAAACATTTCTTCGCCAATTGATGAAAAAGGG TGTATTGGATTCAGTTGCTTTTAATAATTTGATCCGTGGGCACTCGAAAGAAGGAAACCCTGATTCTGCTCTTGAAATTCTAACAATCATGGGTAGGAGA GAGGTTCCTAGAGATGCAGATTCCTACAAGTTGCTTATCGAATGTTACTTGAGGAAAGGTGAACCAGCTGATGCTAAAACAGCTTTGGATGGCATGCTTG AAAATGGGCATATTCCCGAGTCATCCCTTTATAGGTCAGTTATGGAAAGTTTGTTTGAAGACGGAAGGGTCCAGACCTCAAGCAGAGTAATGAAGAGTAT GGTGGAGAAGGGGGTGAAGGAGCATATGGACTTGGTTTCTAAGATATTGGAGGCACTTCTCATTAGAGGTCATGTTGAAGAAGCTATCGGCCGAATTGAT TTACTTATGCATAGTGGTTGTGAGCCTGATATAGACCGACTTTTATCTGTTCTTTGTGAGAAGAAAAAGACAATTGCTGCTCTCAAACTGCTAGATTTTG TTCTTGAGAGAGACCATGTCTTAGATGTTTCAATGTATGATAAAGTTTTAGATGCTCTCGTAGCAGCAGGGAAGACCCTCAATGCATATTCCATGGTATG TAAAATTGTGGAGAAAAGAGGTGCAACCGATTGGAGTAGTCGTTATGAACTGATCCAGAGCCTTAATCAGGAAGGGAACACAAAGCAAGCTGATGTTTTG TCAAGAATGATGAAGGGAAAAACACAAAGTCCCCCAAAGAGAGAAGGAAAGAAGCAAGCTTCTGCAGCTATATAATTTGTTCTCTCTTCATTTTCTTTTT CCTTTTTTAGAGGTAAGAACTGAGAAGTGTTGCAGGGTTTTATGTTGATTATAATAAGTTTATTAGGAAGAGAAATTATGAATTGCTCTTCATTTCAAAT CCAACATTGATATTCCTTTTTATTCACTCTGATGTTCTTCATTATGGATCAGAGATTTGTTATATGGCACACATCACAAGATTTTAATGATTTTATTGTT ATATTGCCACCAATGTGCTTTTACCAGGTTCTTCAGTTTTGTTTTGCATCTGTAACTCAATTCCTTGGAATGATGTAACTGTGAAAGAACTAGACTTGTG TTTTCAATCAGATTTTTCTGTATTCTACATTCCTACATATTTATCACAATACTGAATGTGGATTTGGTGTTTTGATCTGTGCCGTGCTATATTGTGGTAG ATTGAGATCCTTTTTCATTTTGAAGACAAAAGGTAAGAGCAATCCTAGATATTTTAGTTTCTCCCCTTTCGGTTTAAATCTTTGTTTCTTTTGAGCAAAA ACATCCCACCGTGTCAATGTTTGAAATTCTTGCTTTGCAAGTTGCTAATGTTGTTGCTGTCGACAAAGGCAAAACAGAAAAGGCCAATCCATCATTGTCT GAAAAAGGTTCTATTAGAAAGGTATTTAAAGGAAGGTATTTGATTCTTATTTTTTCCATCTTAATTTTCATTTATTCAAGTTTTTTCCCCACCTGACATG GTGTTAAATGAATATTTGAAAGGAAG
• Tissue: flowers
• Gene name: LI_gene_21628;
• Additional information: details;

Expression of Ll_transcript_261469

FPKM

• FPAB: 10.9
• FPNAB: 14.9
• LF1: 11.5
• LF2: 14.5
• LF3: 16.1
• LF4: 14.6
• UF1: 10.4
• UF2: 12
• UF3: 15.1
• UF4: 9.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_261469

• Blastp: Pentatricopeptide repeat-containing protein At2g37230 from Arabidopsis with 63.7% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g37230 from Arabidopsis with 68.13% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G37230)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464106.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;